RNA–Protein interactions for RNA: YLR240W

VPS34, Transcript of Phosphatidylinositol (PI) 3-kinase that synthesizes PI-3-phosphate, yeastyeast

Gene VPS34, Length 2,628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS34YLR240W SLU7Q02775 382 aaKnown RBP2.58□□□□□ -2
VPS34YLR240W NTO1Q12311 748 aa2.58□□□□□ -2
VPS34YLR240W LAS17Q12446 633 aa2.58□□□□□ -2
VPS34YLR240W THI4P32318 326 aa2.58□□□□□ -2
VPS34YLR240W POB3Q04636 552 aaKnown RBP2.58□□□□□ -2
VPS34YLR240W RSC3Q06639 885 aa2.58□□□□□ -2
VPS34YLR240W THI21Q08975 551 aa2.58□□□□□ -2
VPS34YLR240W YOR022CQ12204 715 aa2.58□□□□□ -2
VPS34YLR240W YBR182C-AQ8TGU6 64 aa2.58□□□□□ -2
VPS34YLR240W PRC1P00729 532 aa2.57□□□□□ -2
VPS34YLR240W TUB3P09734 445 aaKnown RBP2.57□□□□□ -2
VPS34YLR240W PFK1P16861 987 aaKnown RBP2.57□□□□□ -2
VPS34YLR240W PMI40P29952 429 aaKnown RBP2.57□□□□□ -2
VPS34YLR240W MTC2P34246 357 aa2.57□□□□□ -2
VPS34YLR240W SET5P38890 526 aaKnown RBP2.57□□□□□ -2
VPS34YLR240W BUL1P48524 976 aa2.57□□□□□ -2
VPS34YLR240W UGO1Q03327 502 aa2.57□□□□□ -2
VPS34YLR240W CHC1P22137 1653 aaKnown RBP2.57□□□□□ -2
VPS34YLR240W GSY1P23337 708 aa2.57□□□□□ -2
VPS34YLR240W MEF1P25039 761 aa2.57□□□□□ -2
VPS34YLR240W TRM2P33753 639 aa2.57□□□□□ -2
VPS34YLR240W PHO23P50947 330 aa2.57□□□□□ -2
VPS34YLR240W URN1Q06525 465 aaKnown RBP2.57□□□□□ -2
VPS34YLR240W LTE1P07866 1435 aa2.57□□□□□ -2
VPS34YLR240W MET6P05694 767 aaKnown RBP2.56□□□□□ -2
VPS34YLR240W PER1P25625 357 aa2.56□□□□□ -2
VPS34YLR240W DEF1P35732 738 aaKnown RBP2.56□□□□□ -2
VPS34YLR240W SAP190P36123 1033 aa2.56□□□□□ -2
VPS34YLR240W RLP7P40693 322 aaKnown RBP2.56□□□□□ -2
VPS34YLR240W ALG12P53730 551 aa2.56□□□□□ -2
VPS34YLR240W ASI2P53895 289 aa2.56□□□□□ -2
VPS34YLR240W CDC9P04819 755 aa2.56□□□□□ -2
VPS34YLR240W MCD4P36051 919 aa2.56□□□□□ -2
VPS34YLR240W ZDS1P50111 915 aaKnown RBP2.56□□□□□ -2
VPS34YLR240W RNH70P53331 553 aa2.56□□□□□ -2
VPS34YLR240W PEX19Q07418 342 aa2.56□□□□□ -2
VPS34YLR240W SWM1Q12379 170 aa2.56□□□□□ -2
VPS34YLR240W TRM11Q12463 433 aa2.56□□□□□ -2
VPS34YLR240W SEC7P11075 2009 aaKnown RBP2.56□□□□□ -2
VPS34YLR240W DIF1O13577 133 aa2.55□□□□□ -2
VPS34YLR240W TUB2P02557 457 aaKnown RBP2.55□□□□□ -2
VPS34YLR240W CAD1P24813 409 aaKnown RBP2.55□□□□□ -2
VPS34YLR240W PPG1P32838 368 aa2.55□□□□□ -2
VPS34YLR240W STO1P34160 861 aaKnown RBP2.55□□□□□ -2
VPS34YLR240W CTF13P35203 478 aa2.55□□□□□ -2
VPS34YLR240W NMD2P38798 1089 aaKnown RBP2.55□□□□□ -2
VPS34YLR240W MSS4P38994 779 aa2.55□□□□□ -2
VPS34YLR240W DSS1P39112 969 aa2.55□□□□□ -2
VPS34YLR240W SHR5P41912 237 aa2.55□□□□□ -2
VPS34YLR240W ALY2P47029 1046 aa2.55□□□□□ -2
VPS34YLR240W ERG5P54781 538 aa2.55□□□□□ -2
VPS34YLR240W GSF2Q04697 403 aaKnown RBP2.55□□□□□ -2
VPS34YLR240W YDR338CQ05497 695 aa2.55□□□□□ -2
VPS34YLR240W NTG2Q08214 380 aa2.55□□□□□ -2
VPS34YLR240W GPR1Q12361 961 aa2.55□□□□□ -2
VPS34YLR240W HAP1P0CE41 1502 aa2.55□□□□□ -2
VPS34YLR240W TRP4P07285 380 aaPredicted RBP2.55□□□□□ -2
VPS34YLR240W SRD1P09007 221 aa2.55□□□□□ -2
VPS34YLR240W PRP4P20053 465 aaKnown RBP2.55□□□□□ -2
VPS34YLR240W VBA3P25594 458 aa2.55□□□□□ -2
VPS34YLR240W PEX6P33760 1030 aa2.55□□□□□ -2
VPS34YLR240W VHR1P40522 640 aa2.55□□□□□ -2
VPS34YLR240W CAF16P43569 289 aa2.55□□□□□ -2
VPS34YLR240W SSY5P47002 699 aa2.55□□□□□ -2
VPS34YLR240W ZIP2P53061 704 aa2.55□□□□□ -2
VPS34YLR240W YOR093CQ12275 1648 aa2.55□□□□□ -2
VPS34YLR240W SIC1P38634 284 aa2.55□□□□□ -2
VPS34YLR240W AIM21P40563 679 aa2.55□□□□□ -2
VPS34YLR240W SNP1Q00916 300 aaPredicted RBP2.55□□□□□ -2
VPS34YLR240W MUS81Q04149 632 aaPredicted RBP2.55□□□□□ -2
VPS34YLR240W HRR25P29295 494 aaKnown RBP2.54□□□□□ -2
VPS34YLR240W EFT1P32324 842 aaKnown RBP2.54□□□□□ -2
VPS34YLR240W PZF1P39933 429 aa2.54□□□□□ -2
VPS34YLR240W PFA3P42836 336 aa2.54□□□□□ -2
VPS34YLR240W MSE1P48525 536 aa2.54□□□□□ -2
VPS34YLR240W KIN4Q01919 800 aa2.54□□□□□ -2
VPS34YLR240W PKH1Q03407 766 aa2.54□□□□□ -2
VPS34YLR240W AIM39Q08223 395 aa2.54□□□□□ -2
VPS34YLR240W PUS9Q12069 462 aa2.54□□□□□ -2
VPS34YLR240W DNF2Q12675 1612 aa2.54□□□□□ -2
VPS34YLR240W NUP157P40064 1391 aaKnown RBP2.54□□□□□ -2
VPS34YLR240W RPP1P38786 293 aa2.54□□□□□ -2
VPS34YLR240W SAK1P38990 1142 aa2.54□□□□□ -2
VPS34YLR240W SSM4P40318 1319 aa2.53□□□□□ -2
VPS34YLR240W HOG1P32485 435 aa2.53□□□□□ -2
VPS34YLR240W NGG1P32494 702 aa2.53□□□□□ -2
VPS34YLR240W YEL1P34225 687 aa2.53□□□□□ -2
VPS34YLR240W MRPS35P53292 345 aa2.53□□□□□ -2
VPS34YLR240W CRR1Q05790 422 aa2.53□□□□□ -2
VPS34YLR240W YLR415CO13578 112 aa2.53□□□□□ -2.01
VPS34YLR240W MIH1P23748 554 aa2.53□□□□□ -2.01
VPS34YLR240W KTR4P38131 464 aa2.53□□□□□ -2.01
VPS34YLR240W CHS7P38843 316 aa2.53□□□□□ -2.01
VPS34YLR240W RPN10P38886 268 aaKnown RBP2.53□□□□□ -2.01
VPS34YLR240W BNA2P47125 453 aa2.53□□□□□ -2.01
VPS34YLR240W SUN4P53616 420 aa2.53□□□□□ -2.01
VPS34YLR240W COG8Q04632 607 aa2.53□□□□□ -2.01
VPS34YLR240W YLR040CQ07988 224 aa2.53□□□□□ -2.01
VPS34YLR240W NUP188P52593 1655 aaKnown RBP2.53□□□□□ -2.01
VPS34YLR240W PCL2P25693 308 aa2.52□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 97.7 ms