RNA–Protein interactions for RNA: YLR035C-A

YLR035C-A, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YLR035C-A, Length 3,468 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YLR035C-AYLR035C-A HIS5P07172 385 aa2.04□□□□□ -2.08
YLR035C-AYLR035C-A PEX2P32800 271 aa2.04□□□□□ -2.08
YLR035C-AYLR035C-A YHR078WP38799 552 aa2.04□□□□□ -2.08
YLR035C-AYLR035C-A JSN1P47135 1091 aaKnown RBP RIP-Chip data2.04□□□□□ -2.08not detected
YLR035C-AYLR035C-A VPS62P53285 467 aa2.04□□□□□ -2.08
YLR035C-AYLR035C-A TFB2Q02939 513 aa2.04□□□□□ -2.08
YLR035C-AYLR035C-A TLG1Q03322 224 aa2.04□□□□□ -2.08
YLR035C-AYLR035C-A YDR132CQ03900 495 aa2.04□□□□□ -2.08
YLR035C-AYLR035C-A NTG2Q08214 380 aa2.04□□□□□ -2.08
YLR035C-AYLR035C-A NOP58Q12499 511 aaKnown RBP2.04□□□□□ -2.08
YLR035C-AYLR035C-A SOD2P00447 233 aa2.03□□□□□ -2.08
YLR035C-AYLR035C-A MRS6P32864 603 aaKnown RBP2.03□□□□□ -2.08
YLR035C-AYLR035C-A UBA2P52488 636 aa2.03□□□□□ -2.08
YLR035C-AYLR035C-A NPY1P53164 384 aa2.03□□□□□ -2.08
YLR035C-AYLR035C-A YLR358CO13565 187 aa2.03□□□□□ -2.08
YLR035C-AYLR035C-A PRE10P21242 288 aaKnown RBP RIP-Chip data2.03□□□□□ -2.08not detected
YLR035C-AYLR035C-A SET5P38890 526 aaKnown RBP2.03□□□□□ -2.08
YLR035C-AYLR035C-A RRT14P40470 206 aa2.03□□□□□ -2.08
YLR035C-AYLR035C-A YGR283CP53336 341 aaPredicted RBP2.03□□□□□ -2.08
YLR035C-AYLR035C-A EAF7P53911 425 aaKnown RBP2.03□□□□□ -2.08
YLR035C-AYLR035C-A PRP3Q03338 469 aaPredicted RBP2.03□□□□□ -2.08
YLR035C-AYLR035C-A COG8Q04632 607 aa2.03□□□□□ -2.08
YLR035C-AYLR035C-A ADY3Q07732 790 aa2.03□□□□□ -2.08
YLR035C-AYLR035C-A AIM39Q08223 395 aa2.03□□□□□ -2.08
YLR035C-AYLR035C-A RTC5Q12108 567 aaKnown RBP2.03□□□□□ -2.08
YLR035C-AYLR035C-A DNM1P54861 757 aa2.03□□□□□ -2.09
YLR035C-AYLR035C-A PHM6Q05637 104 aa2.03□□□□□ -2.09
YLR035C-AYLR035C-A MCP2Q06567 569 aa2.03□□□□□ -2.09
YLR035C-AYLR035C-A UPC2Q12151 913 aa2.03□□□□□ -2.09
YLR035C-AYLR035C-A BPT1P14772 1559 aa2.02□□□□□ -2.09
YLR035C-AYLR035C-A SWE1P32944 819 aa2.02□□□□□ -2.09
YLR035C-AYLR035C-A SPC42P36094 363 aa2.02□□□□□ -2.09
YLR035C-AYLR035C-A CBR1P38626 284 aaKnown RBP2.02□□□□□ -2.09
YLR035C-AYLR035C-A RLP7P40693 322 aaKnown RBP2.02□□□□□ -2.09
YLR035C-AYLR035C-A PKH1Q03407 766 aa2.02□□□□□ -2.09
YLR035C-AYLR035C-A BUL2Q03758 920 aaKnown RBP2.02□□□□□ -2.09
YLR035C-AYLR035C-A YDR338CQ05497 695 aa2.02□□□□□ -2.09
YLR035C-AYLR035C-A SES1P07284 462 aaKnown RBP2.02□□□□□ -2.09
YLR035C-AYLR035C-A SRV2P17555 526 aaKnown RBP2.02□□□□□ -2.09
YLR035C-AYLR035C-A LTV1P34078 463 aa2.02□□□□□ -2.09
YLR035C-AYLR035C-A YKR051WP36142 418 aa2.02□□□□□ -2.09
YLR035C-AYLR035C-A PPS1P38148 807 aa2.02□□□□□ -2.09
YLR035C-AYLR035C-A RPP1P38786 293 aa2.02□□□□□ -2.09
YLR035C-AYLR035C-A PFA3P42836 336 aa2.02□□□□□ -2.09
YLR035C-AYLR035C-A MDM1Q01846 1127 aa2.02□□□□□ -2.09
YLR035C-AYLR035C-A GYL1Q04322 720 aa2.02□□□□□ -2.09
YLR035C-AYLR035C-A RGC1Q06108 1083 aaKnown RBP2.02□□□□□ -2.09
YLR035C-AYLR035C-A YPR172WQ06608 200 aa2.02□□□□□ -2.09
YLR035C-AYLR035C-A YLR125WQ12138 136 aa2.02□□□□□ -2.09
YLR035C-AYLR035C-A CLC1P17891 233 aa2.01□□□□□ -2.09
YLR035C-AYLR035C-A SPC110P32380 944 aa2.01□□□□□ -2.09
YLR035C-AYLR035C-A UBS1P38290 277 aa2.01□□□□□ -2.09
YLR035C-AYLR035C-A MUP1P50276 574 aa2.01□□□□□ -2.09
YLR035C-AYLR035C-A ALG12P53730 551 aa2.01□□□□□ -2.09
YLR035C-AYLR035C-A SLU7Q02775 382 aaKnown RBP2.01□□□□□ -2.09
YLR035C-AYLR035C-A MUS81Q04149 632 aaPredicted RBP2.01□□□□□ -2.09
YLR035C-AYLR035C-A SGT2Q12118 346 aaKnown RBP2.01□□□□□ -2.09
YLR035C-AYLR035C-A FUR1P18562 216 aaKnown RBP2.01□□□□□ -2.09
YLR035C-AYLR035C-A SSD1P24276 1250 aaKnown RBP RIP-Chip data2.01□□□□□ -2.09not detected
YLR035C-AYLR035C-A SPC29P33419 253 aa2.01□□□□□ -2.09
YLR035C-AYLR035C-A ORC3P54790 616 aa2.01□□□□□ -2.09
YLR035C-AYLR035C-A SIZ1Q04195 904 aa2.01□□□□□ -2.09
YLR035C-AYLR035C-A ATG13Q06628 738 aa2.01□□□□□ -2.09
YLR035C-AYLR035C-A PPM2Q08282 695 aa2.01□□□□□ -2.09
YLR035C-AYLR035C-A IRC13Q08630 104 aa2.01□□□□□ -2.09
YLR035C-AYLR035C-A PEP1P32319 1579 aa2.01□□□□□ -2.09
YLR035C-AYLR035C-A HMG1P12683 1054 aa2.01□□□□□ -2.09
YLR035C-AYLR035C-A ERG6P25087 383 aaKnown RBP2.01□□□□□ -2.09
YLR035C-AYLR035C-A EMC3P36039 253 aa2.01□□□□□ -2.09
YLR035C-AYLR035C-A CRP1P38845 465 aaKnown RBP2.01□□□□□ -2.09
YLR035C-AYLR035C-A SDA1P53313 767 aaKnown RBP2.01□□□□□ -2.09
YLR035C-AYLR035C-A ECM3Q99252 613 aa2.01□□□□□ -2.09
YLR035C-AYLR035C-A ELM1P32801 640 aa2□□□□□ -2.09
YLR035C-AYLR035C-A MET12P46151 657 aa2□□□□□ -2.09
YLR035C-AYLR035C-A MNN10P50108 393 aaKnown RBP2□□□□□ -2.09
YLR035C-AYLR035C-A MAL11P53048 616 aa2□□□□□ -2.09
YLR035C-AYLR035C-A NOG2P53742 486 aaKnown RBP2□□□□□ -2.09
YLR035C-AYLR035C-A ECM30Q06673 1274 aa2□□□□□ -2.09
YLR035C-AYLR035C-A YLR149CQ99296 730 aa2□□□□□ -2.09
YLR035C-AYLR035C-A MLP2P40457 1679 aa2□□□□□ -2.09
YLR035C-AYLR035C-A EFB1P32471 206 aaKnown RBP2□□□□□ -2.09
YLR035C-AYLR035C-A PEX6P33760 1030 aa2□□□□□ -2.09
YLR035C-AYLR035C-A GGA2P38817 585 aaKnown RBP2□□□□□ -2.09
YLR035C-AYLR035C-A RPN10P38886 268 aaKnown RBP2□□□□□ -2.09
YLR035C-AYLR035C-A YLR040CQ07988 224 aa2□□□□□ -2.09
YLR035C-AYLR035C-A NOP12Q08208 459 aaKnown RBP2□□□□□ -2.09
YLR035C-AYLR035C-A GRR1P24814 1151 aa2□□□□□ -2.09
YLR035C-AYLR035C-A RCF1Q03713 159 aa2□□□□□ -2.09
YLR035C-AYLR035C-A DAL3P32459 195 aa1.99□□□□□ -2.09
YLR035C-AYLR035C-A PCL5P38794 229 aa1.99□□□□□ -2.09
YLR035C-AYLR035C-A SIT1P39980 628 aa1.99□□□□□ -2.09
YLR035C-AYLR035C-A BUD6P41697 788 aa1.99□□□□□ -2.09
YLR035C-AYLR035C-A MSE1P48525 536 aa1.99□□□□□ -2.09
YLR035C-AYLR035C-A RPN7Q06103 429 aaKnown RBP1.99□□□□□ -2.09
YLR035C-AYLR035C-A GLE1Q12315 538 aa1.99□□□□□ -2.09
YLR035C-AYLR035C-A YML133CQ03099 1374 aa1.99□□□□□ -2.09
YLR035C-AYLR035C-A YLL067CQ07888 1374 aa1.99□□□□□ -2.09
YLR035C-AYLR035C-A YLL066CQ99208 1374 aa1.99□□□□□ -2.09
YLR035C-AYLR035C-A TY1B-BRQ12193 1756 aa1.99□□□□□ -2.09
YLR035C-AYLR035C-A CDC42P19073 191 aa1.99□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 46.6 ms