RNA–Protein interactions for RNA: YJR055W

HIT1, Transcript of Protein involved in C/D snoRNP assembly, yeastyeast

Gene HIT1, Length 495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HIT1YJR055W CCT3P39077 534 aaKnown RBP3.62□□□□□ -1.83
HIT1YJR055W ECM1P39715 212 aa3.62□□□□□ -1.83
HIT1YJR055W RLP7P40693 322 aaKnown RBP3.62□□□□□ -1.83
HIT1YJR055W SHR5P41912 237 aa3.62□□□□□ -1.83
HIT1YJR055W ALG2P43636 503 aa3.62□□□□□ -1.83
HIT1YJR055W YGR125WP53273 1036 aa3.62□□□□□ -1.83
HIT1YJR055W ATP25Q03153 612 aa3.62□□□□□ -1.83
HIT1YJR055W DIF1O13577 133 aa3.61□□□□□ -1.83
HIT1YJR055W SPO11P23179 398 aa3.61□□□□□ -1.83
HIT1YJR055W UBS1P38290 277 aa3.61□□□□□ -1.83
HIT1YJR055W YHR020WP38708 688 aaKnown RBP3.61□□□□□ -1.83
HIT1YJR055W HUL4P40985 892 aa3.61□□□□□ -1.83
HIT1YJR055W TY4A-JP47023 414 aa3.61□□□□□ -1.83
HIT1YJR055W TIM54P47045 478 aa3.61□□□□□ -1.83
HIT1YJR055W ZDS1P50111 915 aaKnown RBP3.61□□□□□ -1.83
HIT1YJR055W MTL1P53214 551 aa3.61□□□□□ -1.83
HIT1YJR055W YKL033W-AQ86ZR7 236 aa3.61□□□□□ -1.83
HIT1YJR055W PYC1P11154 1178 aaKnown RBP3.6□□□□□ -1.83
HIT1YJR055W LYS9P38999 446 aa3.6□□□□□ -1.83
HIT1YJR055W YEL020CP39994 560 aa3.6□□□□□ -1.83
HIT1YJR055W PAN2P53010 1115 aaPredicted RBP3.6□□□□□ -1.83
HIT1YJR055W ICT1Q12385 394 aa3.6□□□□□ -1.83
HIT1YJR055W PHR1P05066 565 aaKnown RBP RIP-Chip data3.59□□□□□ -1.83not detected
HIT1YJR055W SPC29P33419 253 aa3.59□□□□□ -1.83
HIT1YJR055W GLG1P36143 616 aa3.59□□□□□ -1.83
HIT1YJR055W SFB3P38810 929 aa3.59□□□□□ -1.83
HIT1YJR055W FMO1P38866 432 aa3.59□□□□□ -1.83
HIT1YJR055W PRP31P49704 494 aaPredicted RBP3.59□□□□□ -1.83
HIT1YJR055W RTA1P53047 317 aa3.59□□□□□ -1.83
HIT1YJR055W YBP2P53169 641 aa3.59□□□□□ -1.83
HIT1YJR055W YDR338CQ05497 695 aa3.59□□□□□ -1.83
HIT1YJR055W FLC1Q08967 793 aa3.59□□□□□ -1.83
HIT1YJR055W ADE2P21264 571 aaKnown RBP3.58□□□□□ -1.84
HIT1YJR055W PER1P25625 357 aa3.58□□□□□ -1.84
HIT1YJR055W MVD1P32377 396 aaKnown RBP3.58□□□□□ -1.84
HIT1YJR055W YHR112CP38716 378 aa3.58□□□□□ -1.84
HIT1YJR055W HRB1P38922 454 aaKnown RBP RIP-Chip data3.58□□□□□ -1.84not detected
HIT1YJR055W BDH2P39713 417 aa3.58□□□□□ -1.84
HIT1YJR055W ARG2P40360 574 aa3.58□□□□□ -1.84
HIT1YJR055W CTR1P49573 406 aa3.58□□□□□ -1.84
HIT1YJR055W MRI1Q06489 411 aaKnown RBP3.58□□□□□ -1.84
HIT1YJR055W YAP7Q08182 245 aa3.58□□□□□ -1.84
HIT1YJR055W RPN13O13563 156 aa3.57□□□□□ -1.84
HIT1YJR055W TMT1P32643 299 aa3.57□□□□□ -1.84
HIT1YJR055W NUP60P39705 539 aa3.57□□□□□ -1.84
HIT1YJR055W ALY2P47029 1046 aa3.57□□□□□ -1.84
HIT1YJR055W FHN1P53279 174 aa3.57□□□□□ -1.84
HIT1YJR055W CTK1Q03957 528 aaKnown RBP3.57□□□□□ -1.84
HIT1YJR055W RGC1Q06108 1083 aaKnown RBP3.57□□□□□ -1.84
HIT1YJR055W PHO11P35842 467 aa3.56□□□□□ -1.84
HIT1YJR055W APL2P36000 726 aaPredicted RBP3.56□□□□□ -1.84
HIT1YJR055W PHO12P38693 467 aa3.56□□□□□ -1.84
HIT1YJR055W RSP5P39940 809 aaKnown RBP3.56□□□□□ -1.84
HIT1YJR055W ATG4P53867 494 aa3.56□□□□□ -1.84
HIT1YJR055W ARG5,6Q01217 863 aa3.56□□□□□ -1.84
HIT1YJR055W MLH3Q12083 715 aa3.56□□□□□ -1.84
HIT1YJR055W HRP1Q99383 534 aaKnown RBP3.56□□□□□ -1.84
HIT1YJR055W CAN1P04817 590 aa3.55□□□□□ -1.84
HIT1YJR055W ERG6P25087 383 aaKnown RBP3.55□□□□□ -1.84
HIT1YJR055W TRZ1P36159 838 aaPredicted RBP3.55□□□□□ -1.84
HIT1YJR055W HUL5P53119 910 aa3.55□□□□□ -1.84
HIT1YJR055W ORC2P32833 620 aa3.54□□□□□ -1.84
HIT1YJR055W PAC2P39937 518 aa3.54□□□□□ -1.84
HIT1YJR055W GLO1P50107 326 aa3.54□□□□□ -1.84
HIT1YJR055W UBC9P50623 157 aaPredicted RBP3.54□□□□□ -1.84
HIT1YJR055W MCM21Q06675 368 aa3.54□□□□□ -1.84
HIT1YJR055W YLR149CQ99296 730 aa3.54□□□□□ -1.84
HIT1YJR055W HOM2P13663 365 aaKnown RBP3.53□□□□□ -1.84
HIT1YJR055W VPS34P22543 875 aa3.53□□□□□ -1.84
HIT1YJR055W YJL049WP47048 450 aa3.53□□□□□ -1.84
HIT1YJR055W ORC4P54791 529 aa3.53□□□□□ -1.84
HIT1YJR055W THR1P17423 357 aaKnown RBP3.52□□□□□ -1.85
HIT1YJR055W CCR4P31384 837 aaKnown RBP3.52□□□□□ -1.85
HIT1YJR055W APT2P36973 181 aa3.52□□□□□ -1.85
HIT1YJR055W MIP6P38760 659 aaKnown RBP3.52□□□□□ -1.85
HIT1YJR055W GET2P40056 285 aa3.52□□□□□ -1.85
HIT1YJR055W BNA2P47125 453 aa3.52□□□□□ -1.85
HIT1YJR055W RIM13Q03792 727 aa3.52□□□□□ -1.85
HIT1YJR055W OSW1Q08692 278 aa3.52□□□□□ -1.85
HIT1YJR055W USV1Q12132 391 aa3.52□□□□□ -1.85
HIT1YJR055W GAL11P19659 1081 aa3.51□□□□□ -1.85
HIT1YJR055W MTC2P34246 357 aa3.51□□□□□ -1.85
HIT1YJR055W MUP3P38734 546 aa3.51□□□□□ -1.85
HIT1YJR055W MRK1P50873 501 aa3.51□□□□□ -1.85
HIT1YJR055W SEC5P89102 971 aa3.51□□□□□ -1.85
HIT1YJR055W HMO1Q03973 246 aaKnown RBP3.51□□□□□ -1.85
HIT1YJR055W ZRT2Q12436 422 aa3.51□□□□□ -1.85
HIT1YJR055W Q0142Q9ZZW4 58 aa3.51□□□□□ -1.85
HIT1YJR055W FUB1P25659 250 aa3.5□□□□□ -1.85
HIT1YJR055W MCD4P36051 919 aa3.5□□□□□ -1.85
HIT1YJR055W SET3P36124 751 aa3.5□□□□□ -1.85
HIT1YJR055W CRP1P38845 465 aaKnown RBP3.5□□□□□ -1.85
HIT1YJR055W YFL052WP43551 465 aa3.5□□□□□ -1.85
HIT1YJR055W SEG1Q04279 960 aa3.5□□□□□ -1.85
HIT1YJR055W RNR1P21524 888 aaKnown RBP3.49□□□□□ -1.85
HIT1YJR055W GMH1P36125 273 aa3.49□□□□□ -1.85
HIT1YJR055W GDH3P39708 457 aa3.49□□□□□ -1.85
HIT1YJR055W CLF1Q12309 687 aaPredicted RBP3.49□□□□□ -1.85
HIT1YJR055W PEX1P24004 1043 aa3.48□□□□□ -1.85
HIT1YJR055W GID8P40208 455 aa3.48□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 10.4 ms