RNA–Protein interactions for RNA: YHR077C

NMD2, Transcript of Protein involved in the nonsense-mediated mRNA decay (NMD) pathway, yeastyeast

Gene NMD2, Length 3,270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NMD2YHR077C MSG5P38590 489 aa3.2□□□□□ -1.9
NMD2YHR077C SAP185P40856 1058 aa3.2□□□□□ -1.9
NMD2YHR077C YGR111WP53265 400 aa3.2□□□□□ -1.9
NMD2YHR077C ZPR1P53303 486 aaKnown RBP3.2□□□□□ -1.9
NMD2YHR077C OMS1Q06668 471 aa3.2□□□□□ -1.9
NMD2YHR077C PRE10P21242 288 aaKnown RBP RIP-Chip data3.2□□□□□ -1.9not detected
NMD2YHR077C YBL055CP34220 418 aaPredicted RBP3.2□□□□□ -1.9
NMD2YHR077C YSW1P38280 609 aa3.2□□□□□ -1.9
NMD2YHR077C CCT2P39076 527 aaKnown RBP3.2□□□□□ -1.9
NMD2YHR077C YNL040WP53960 456 aaPredicted RBP3.2□□□□□ -1.9
NMD2YHR077C GIR2Q03768 265 aaPredicted RBP3.2□□□□□ -1.9
NMD2YHR077C ATG16Q03818 150 aa3.2□□□□□ -1.9
NMD2YHR077C YDR338CQ05497 695 aa3.2□□□□□ -1.9
NMD2YHR077C ECM7Q06200 448 aa3.2□□□□□ -1.9
NMD2YHR077C YPL225WQ08971 146 aaKnown RBP3.2□□□□□ -1.9
NMD2YHR077C FAP7Q12055 197 aaPredicted RBP3.2□□□□□ -1.9
NMD2YHR077C CDC33P07260 213 aaKnown RBP3.19□□□□□ -1.9
NMD2YHR077C FLR1P38124 548 aa3.19□□□□□ -1.9
NMD2YHR077C MRX3P38172 270 aa3.19□□□□□ -1.9
NMD2YHR077C DYS1P38791 387 aa3.19□□□□□ -1.9
NMD2YHR077C PMC1P38929 1173 aaPredicted RBP3.19□□□□□ -1.9
NMD2YHR077C YIL089WP40500 205 aa3.19□□□□□ -1.9
NMD2YHR077C ULI1P43604 169 aa3.19□□□□□ -1.9
NMD2YHR077C RPC17P47076 161 aa3.19□□□□□ -1.9
NMD2YHR077C RPS7BP48164 190 aaKnown RBP3.19□□□□□ -1.9
NMD2YHR077C HSH155P49955 971 aaKnown RBP3.19□□□□□ -1.9
NMD2YHR077C RNY1Q02933 434 aaKnown RBP3.19□□□□□ -1.9
NMD2YHR077C TRS130Q03660 1102 aa3.19□□□□□ -1.9
NMD2YHR077C MAG2Q06436 670 aaKnown RBP3.19□□□□□ -1.9
NMD2YHR077C TY1B-AO13527 1196 aaKnown RBP3.19□□□□□ -1.9
NMD2YHR077C GCR1P07261 785 aa3.19□□□□□ -1.9
NMD2YHR077C ADH4P10127 382 aa3.19□□□□□ -1.9
NMD2YHR077C RRT12P25381 491 aa3.19□□□□□ -1.9
NMD2YHR077C MLS1P30952 554 aa3.19□□□□□ -1.9
NMD2YHR077C PDB1P32473 366 aaKnown RBP3.19□□□□□ -1.9
NMD2YHR077C NIP1P32497 812 aaKnown RBP3.19□□□□□ -1.9
NMD2YHR077C TRM2P33753 639 aa3.19□□□□□ -1.9
NMD2YHR077C YEL025CP39991 1188 aa3.19□□□□□ -1.9
NMD2YHR077C TMN3P40071 706 aa3.19□□□□□ -1.9
NMD2YHR077C MKT1P40850 830 aaKnown RBP3.19□□□□□ -1.9
NMD2YHR077C TFG1P41895 735 aaPredicted RBP3.19□□□□□ -1.9
NMD2YHR077C PXA1P41909 870 aa3.19□□□□□ -1.9
NMD2YHR077C NET1P47035 1189 aa3.19□□□□□ -1.9
NMD2YHR077C YGR125WP53273 1036 aa3.19□□□□□ -1.9
NMD2YHR077C RPA49Q01080 415 aaPredicted RBP3.19□□□□□ -1.9
NMD2YHR077C FRA1Q07825 749 aa3.19□□□□□ -1.9
NMD2YHR077C NOC3Q07896 663 aaPredicted RBP3.19□□□□□ -1.9
NMD2YHR077C NCA2Q12374 616 aa3.19□□□□□ -1.9
NMD2YHR077C PBS2P08018 668 aa3.18□□□□□ -1.9
NMD2YHR077C YMR085WP0CF18 432 aa3.18□□□□□ -1.9
NMD2YHR077C RPL4AP10664 362 aaKnown RBP3.18□□□□□ -1.9
NMD2YHR077C PMR1P13586 950 aa3.18□□□□□ -1.9
NMD2YHR077C COX11P19516 300 aaKnown RBP3.18□□□□□ -1.9
NMD2YHR077C YCR015CP25616 317 aa3.18□□□□□ -1.9
NMD2YHR077C CDC20P26309 610 aa3.18□□□□□ -1.9
NMD2YHR077C RME1P32338 300 aaKnown RBP3.18□□□□□ -1.9
NMD2YHR077C RRN6P32786 894 aa3.18□□□□□ -1.9
NMD2YHR077C ABZ1P37254 787 aaPredicted RBP3.18□□□□□ -1.9
NMD2YHR077C DUG2P38149 878 aa3.18□□□□□ -1.9
NMD2YHR077C GPB2P39717 880 aa3.18□□□□□ -1.9
NMD2YHR077C TRS85P46944 698 aa3.18□□□□□ -1.9
NMD2YHR077C COS5P47187 383 aa3.18□□□□□ -1.9
NMD2YHR077C RPL4BP49626 362 aaKnown RBP3.18□□□□□ -1.9
NMD2YHR077C UBP15P50101 1230 aa3.18□□□□□ -1.9
NMD2YHR077C SLD5Q03406 294 aa3.18□□□□□ -1.9
NMD2YHR077C IWR1Q07532 353 aaPredicted RBP3.18□□□□□ -1.9
NMD2YHR077C YLR422WQ06409 1932 aa3.18□□□□□ -1.9
NMD2YHR077C VMA1P17255 1071 aaKnown RBP3.18□□□□□ -1.9
NMD2YHR077C AEP2P22136 580 aa3.18□□□□□ -1.9
NMD2YHR077C ILV6P25605 309 aaKnown RBP3.18□□□□□ -1.9
NMD2YHR077C PIN4P34217 668 aaKnown RBP RIP-Chip data3.18□□□□□ -1.9 RIP-Chip
NMD2YHR077C VHC1P38329 1120 aa3.18□□□□□ -1.9
NMD2YHR077C SAH1P39954 449 aaKnown RBP3.18□□□□□ -1.9
NMD2YHR077C YJL107CP42947 387 aa3.18□□□□□ -1.9
NMD2YHR077C ADA2Q02336 434 aa3.18□□□□□ -1.9
NMD2YHR077C OSW1Q08692 278 aa3.18□□□□□ -1.9
NMD2YHR077C YEL077CQ3E7X8 1277 aa3.18□□□□□ -1.9
NMD2YHR077C VMA2P16140 517 aaKnown RBP3.18□□□□□ -1.9
NMD2YHR077C BAS1P22035 811 aa3.18□□□□□ -1.9
NMD2YHR077C MCM5P29496 775 aaKnown RBP3.18□□□□□ -1.9
NMD2YHR077C IRE1P32361 1115 aa3.18□□□□□ -1.9
NMD2YHR077C DPH2P32461 534 aa3.18□□□□□ -1.9
NMD2YHR077C SWI3P32591 825 aa3.18□□□□□ -1.9
NMD2YHR077C ECM2P38241 364 aaKnown RBP3.18□□□□□ -1.9
NMD2YHR077C PFK26P40433 827 aaKnown RBP3.18□□□□□ -1.9
NMD2YHR077C AIM21P40563 679 aa3.18□□□□□ -1.9
NMD2YHR077C TDA10P42938 290 aa3.18□□□□□ -1.9
NMD2YHR077C UTP6Q02354 440 aaKnown RBP3.18□□□□□ -1.9
NMD2YHR077C SNU56Q03782 492 aaKnown RBP3.18□□□□□ -1.9
NMD2YHR077C KAP95Q06142 861 aaKnown RBP3.18□□□□□ -1.9
NMD2YHR077C DIS3Q08162 1001 aaKnown RBP3.18□□□□□ -1.9
NMD2YHR077C APL5Q08951 932 aaKnown RBP3.18□□□□□ -1.9
NMD2YHR077C TYW1Q08960 810 aaKnown RBP3.18□□□□□ -1.9
NMD2YHR077C SLP1Q12232 587 aa3.18□□□□□ -1.9
NMD2YHR077C HIF1Q12373 385 aa3.18□□□□□ -1.9
NMD2YHR077C ZRT2Q12436 422 aa3.18□□□□□ -1.9
NMD2YHR077C AVL9Q12500 764 aa3.18□□□□□ -1.9
NMD2YHR077C ZPS1Q12512 249 aa3.18□□□□□ -1.9
NMD2YHR077C HVG1P0CE11 249 aa3.17□□□□□ -1.9
NMD2YHR077C PKC1P24583 1151 aa3.17□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms