RNA–Protein interactions for RNA: YFL040W

YFL040W, Transcript of Putative transporter, yeast

Gene YFL040W, Length 1,623 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YFL040W	YFL040W	EXG2	P52911	562 aa		5.03	□□□□□ -1.6
YFL040W	YFL040W	GPG1	P53130	126 aa		5.03	□□□□□ -1.6
YFL040W	YFL040W	PRP4	P20053	465 aa	Known RBP	5.02	□□□□□ -1.61
YFL040W	YFL040W	PMC1	P38929	1173 aa	Predicted RBP	5.02	□□□□□ -1.61
YFL040W	YFL040W	YJR096W	P47137	282 aa		5.02	□□□□□ -1.61
YFL040W	YFL040W	MNN10	P50108	393 aa	Known RBP	5.02	□□□□□ -1.61
YFL040W	YFL040W	MCM6	P53091	1017 aa	Known RBP	5.02	□□□□□ -1.61
YFL040W	YFL040W	PKH1	Q03407	766 aa		5.02	□□□□□ -1.61
YFL040W	YFL040W	MTQ2	Q03920	221 aa	Predicted RBP	5.02	□□□□□ -1.61
YFL040W	YFL040W	GPR1	Q12361	961 aa		5.02	□□□□□ -1.61
YFL040W	YFL040W	CAD1	P24813	409 aa	Known RBP	5.01	□□□□□ -1.61
YFL040W	YFL040W	PRP19	P32523	503 aa	Known RBP	5.01	□□□□□ -1.61
YFL040W	YFL040W	YKR018C	P36114	725 aa		5.01	□□□□□ -1.61
YFL040W	YFL040W	PFA3	P42836	336 aa		5.01	□□□□□ -1.61
YFL040W	YFL040W	PEX8	P53248	589 aa		5.01	□□□□□ -1.61
YFL040W	YFL040W	ASM4	Q05166	528 aa		5.01	□□□□□ -1.61
YFL040W	YFL040W	FAP7	Q12055	197 aa	Predicted RBP	5.01	□□□□□ -1.61
YFL040W	YFL040W	BUD4	P47136	1447 aa		5.01	□□□□□ -1.61
YFL040W	YFL040W	NGG1	P32494	702 aa		5.01	□□□□□ -1.61
YFL040W	YFL040W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	5.01	□□□□□ -1.61	not detected
YFL040W	YFL040W	CLU1	Q03690	1277 aa	Known RBP	5.01	□□□□□ -1.61
YFL040W	YFL040W	HFD1	Q04458	532 aa		5.01	□□□□□ -1.61
YFL040W	YFL040W	MDS3	P53094	1487 aa		5	□□□□□ -1.61
YFL040W	YFL040W	SEC6	P32844	805 aa		5	□□□□□ -1.61
YFL040W	YFL040W	CTF13	P35203	478 aa		5	□□□□□ -1.61
YFL040W	YFL040W	MNN4	P36044	1178 aa		5	□□□□□ -1.61
YFL040W	YFL040W	MIP6	P38760	659 aa	Known RBP	5	□□□□□ -1.61
YFL040W	YFL040W	RPP1	P38786	293 aa		5	□□□□□ -1.61
YFL040W	YFL040W	GPP1	P41277	250 aa	Known RBP	5	□□□□□ -1.61
YFL040W	YFL040W	PCL10	P53124	433 aa		5	□□□□□ -1.61
YFL040W	YFL040W	ENB1	Q08299	606 aa		5	□□□□□ -1.61
YFL040W	YFL040W	TRM11	Q12463	433 aa		5	□□□□□ -1.61
YFL040W	YFL040W	YLR415C	O13578	112 aa		4.99	□□□□□ -1.61
YFL040W	YFL040W	DCG1	P32460	244 aa		4.99	□□□□□ -1.61
YFL040W	YFL040W	IRC24	P40580	263 aa		4.99	□□□□□ -1.61
YFL040W	YFL040W	LAS17	Q12446	633 aa		4.99	□□□□□ -1.61
YFL040W	YFL040W	THO2	P53552	1597 aa	Known RBP	4.99	□□□□□ -1.61
YFL040W	YFL040W	ORC4	P54791	529 aa		4.98	□□□□□ -1.61
YFL040W	YFL040W	PFK1	P16861	987 aa	Known RBP	4.97	□□□□□ -1.61
YFL040W	YFL040W	TDA3	P38758	523 aa		4.97	□□□□□ -1.61
YFL040W	YFL040W	NOP2	P40991	618 aa	Known RBP	4.97	□□□□□ -1.61
YFL040W	YFL040W	RET2	P43621	546 aa		4.97	□□□□□ -1.61
YFL040W	YFL040W	YBP2	P53169	641 aa		4.97	□□□□□ -1.61
YFL040W	YFL040W	ARP4	P80428	489 aa		4.97	□□□□□ -1.61
YFL040W	YFL040W	BUD21	Q08492	214 aa	Predicted RBP	4.97	□□□□□ -1.61
YFL040W	YFL040W	YTM1	Q12024	460 aa	Predicted RBP	4.97	□□□□□ -1.61
YFL040W	YFL040W	GZF3	P42944	551 aa	Known RBP	4.97	□□□□□ -1.61
YFL040W	YFL040W	MRPS35	P53292	345 aa		4.97	□□□□□ -1.61
YFL040W	YFL040W	ERG5	P54781	538 aa		4.97	□□□□□ -1.61
YFL040W	YFL040W	PMA1	P05030	918 aa	Known RBP	4.96	□□□□□ -1.62
YFL040W	YFL040W	YBR259W	P38338	688 aa		4.96	□□□□□ -1.62
YFL040W	YFL040W	OAF1	P39720	1047 aa	Predicted RBP	4.96	□□□□□ -1.62
YFL040W	YFL040W	PRP31	P49704	494 aa	Predicted RBP	4.96	□□□□□ -1.62
YFL040W	YFL040W	COG6	P53959	839 aa		4.96	□□□□□ -1.62
YFL040W	YFL040W	SUB1	P54000	292 aa	Known RBP	4.96	□□□□□ -1.62
YFL040W	YFL040W	DCS2	Q12123	353 aa		4.96	□□□□□ -1.62
YFL040W	YFL040W	TRP4	P07285	380 aa	Predicted RBP	4.95	□□□□□ -1.62
YFL040W	YFL040W	CTS1	P29029	562 aa		4.95	□□□□□ -1.62
YFL040W	YFL040W	SHM2	P37291	469 aa	Known RBP	4.95	□□□□□ -1.62
YFL040W	YFL040W	SIC1	P38634	284 aa		4.95	□□□□□ -1.62
YFL040W	YFL040W	SSZ1	P38788	538 aa	Known RBP	4.95	□□□□□ -1.62
YFL040W	YFL040W	CCT5	P40413	562 aa	Known RBP	4.95	□□□□□ -1.62
YFL040W	YFL040W	YJR039W	P47107	1121 aa		4.95	□□□□□ -1.62
YFL040W	YFL040W	YGR153W	P48238	217 aa		4.95	□□□□□ -1.62
YFL040W	YFL040W	PHO23	P50947	330 aa		4.95	□□□□□ -1.62
YFL040W	YFL040W	LEE1	Q02799	301 aa	Known RBP	4.95	□□□□□ -1.62
YFL040W	YFL040W	NRG1	Q03125	231 aa		4.95	□□□□□ -1.62
YFL040W	YFL040W	ESC8	Q08119	714 aa		4.95	□□□□□ -1.62
YFL040W	YFL040W	YOR378W	Q08902	515 aa		4.95	□□□□□ -1.62
YFL040W	YFL040W	HIR3	P47171	1648 aa		4.95	□□□□□ -1.62
YFL040W	YFL040W	EUG1	P32474	517 aa		4.94	□□□□□ -1.62
YFL040W	YFL040W	MAL31	P38156	614 aa		4.94	□□□□□ -1.62
YFL040W	YFL040W	FKH2	P41813	862 aa		4.94	□□□□□ -1.62
YFL040W	YFL040W	BRE5	P53741	515 aa	Known RBP	4.94	□□□□□ -1.62
YFL040W	YFL040W	GPD1	Q00055	391 aa	Known RBP	4.94	□□□□□ -1.62
YFL040W	YFL040W	SND1	Q04007	877 aa		4.94	□□□□□ -1.62
YFL040W	YFL040W	REV3	P14284	1504 aa		4.94	□□□□□ -1.62
YFL040W	YFL040W	ADE2	P21264	571 aa	Known RBP	4.94	□□□□□ -1.62
YFL040W	YFL040W	HCM1	P25364	564 aa		4.94	□□□□□ -1.62
YFL040W	YFL040W	TAF1	P46677	1066 aa		4.94	□□□□□ -1.62
YFL040W	YFL040W	MNN11	P46985	422 aa	Known RBP	4.94	□□□□□ -1.62
YFL040W	YFL040W	ARG5,6	Q01217	863 aa		4.94	□□□□□ -1.62
YFL040W	YFL040W	ECM9	Q02202	377 aa		4.94	□□□□□ -1.62
YFL040W	YFL040W	SLX4	Q12098	748 aa		4.94	□□□□□ -1.62
YFL040W	YFL040W	YBR071W	P38243	211 aa		4.93	□□□□□ -1.62
YFL040W	YFL040W	ECM1	P39715	212 aa		4.93	□□□□□ -1.62
YFL040W	YFL040W	SET2	P46995	733 aa	Known RBP	4.93	□□□□□ -1.62
YFL040W	YFL040W	BUL1	P48524	976 aa		4.93	□□□□□ -1.62
YFL040W	YFL040W	TGL2	P54857	326 aa		4.93	□□□□□ -1.62
YFL040W	YFL040W	TGL5	Q12043	749 aa		4.93	□□□□□ -1.62
YFL040W	YFL040W	TMA7	Q3E764	64 aa	Known RBP	4.93	□□□□□ -1.62
YFL040W	YFL040W	APL2	P36000	726 aa	Predicted RBP	4.92	□□□□□ -1.62
YFL040W	YFL040W	AKL1	P38080	1108 aa	Known RBP	4.92	□□□□□ -1.62
YFL040W	YFL040W	FUI1	P38196	639 aa		4.92	□□□□□ -1.62
YFL040W	YFL040W	YHR202W	P38887	602 aa		4.92	□□□□□ -1.62
YFL040W	YFL040W	HXT6	P39003	570 aa	Known RBP	4.92	□□□□□ -1.62
YFL040W	YFL040W	HXT7	P39004	570 aa		4.92	□□□□□ -1.62
YFL040W	YFL040W	NTO1	Q12311	748 aa		4.92	□□□□□ -1.62
YFL040W	YFL040W	DID4	P36108	232 aa		4.91	□□□□□ -1.62
YFL040W	YFL040W	YKR075C	P36155	307 aa		4.91	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms