RNA–Protein interactions for RNA: YER088C

DOT6, Transcript of Protein involved in rRNA and ribosome biogenesis, yeast

Gene DOT6, Length 2,013 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOT6	YER088C	CTF13	P35203	478 aa		2.76	□□□□□ -1.97
DOT6	YER088C	DEF1	P35732	738 aa	Known RBP	2.76	□□□□□ -1.97
DOT6	YER088C	SPC42	P36094	363 aa		2.76	□□□□□ -1.97
DOT6	YER088C	DSS1	P39112	969 aa		2.76	□□□□□ -1.97
DOT6	YER088C	TY1B-DR3	Q99231	1755 aa		2.76	□□□□□ -1.97
DOT6	YER088C	TRP4	P07285	380 aa	Predicted RBP	2.76	□□□□□ -1.97
DOT6	YER088C	GSY1	P23337	708 aa		2.76	□□□□□ -1.97
DOT6	YER088C	YEL1	P34225	687 aa		2.76	□□□□□ -1.97
DOT6	YER088C	PCM1	P38628	557 aa	Known RBP	2.76	□□□□□ -1.97
DOT6	YER088C	VHR1	P40522	640 aa		2.76	□□□□□ -1.97
DOT6	YER088C	PFA3	P42836	336 aa		2.76	□□□□□ -1.97
DOT6	YER088C	SSY5	P47002	699 aa		2.76	□□□□□ -1.97
DOT6	YER088C	ALY2	P47029	1046 aa		2.76	□□□□□ -1.97
DOT6	YER088C	ZDS1	P50111	915 aa	Known RBP	2.76	□□□□□ -1.97
DOT6	YER088C	PUS2	P53167	370 aa		2.76	□□□□□ -1.97
DOT6	YER088C	YNL193W	P53870	558 aa		2.76	□□□□□ -1.97
DOT6	YER088C	DNM1	P54861	757 aa		2.76	□□□□□ -1.97
DOT6	YER088C	TFB2	Q02939	513 aa		2.76	□□□□□ -1.97
DOT6	YER088C	YLR149C	Q99296	730 aa		2.76	□□□□□ -1.97
DOT6	YER088C	DNF2	Q12675	1612 aa		2.76	□□□□□ -1.97
DOT6	YER088C	DIF1	O13577	133 aa		2.75	□□□□□ -1.97
DOT6	YER088C	HCM1	P25364	564 aa		2.75	□□□□□ -1.97
DOT6	YER088C	HOG1	P32485	435 aa		2.75	□□□□□ -1.97
DOT6	YER088C	BNA2	P47125	453 aa		2.75	□□□□□ -1.97
DOT6	YER088C	PEX19	Q07418	342 aa		2.75	□□□□□ -1.97
DOT6	YER088C	TRM13	Q12383	476 aa		2.75	□□□□□ -1.97
DOT6	YER088C	Q0142	Q9ZZW4	58 aa		2.75	□□□□□ -1.97
DOT6	YER088C	DRS2	P39524	1355 aa		2.75	□□□□□ -1.97
DOT6	YER088C	RAD18	P10862	487 aa		2.75	□□□□□ -1.97
DOT6	YER088C	PFK1	P16861	987 aa	Known RBP	2.75	□□□□□ -1.97
DOT6	YER088C	SAP190	P36123	1033 aa		2.75	□□□□□ -1.97
DOT6	YER088C	YKR051W	P36142	418 aa		2.75	□□□□□ -1.97
DOT6	YER088C	SAK1	P38990	1142 aa		2.75	□□□□□ -1.97
DOT6	YER088C	MGS1	P40151	587 aa		2.75	□□□□□ -1.97
DOT6	YER088C	YJR142W	P47173	342 aa		2.75	□□□□□ -1.97
DOT6	YER088C	ATG33	Q06485	197 aa		2.75	□□□□□ -1.97
DOT6	YER088C	TRM11	Q12463	433 aa		2.75	□□□□□ -1.97
DOT6	YER088C	SFL1	P20134	766 aa		2.74	□□□□□ -1.97
DOT6	YER088C	SIC1	P38634	284 aa		2.74	□□□□□ -1.97
DOT6	YER088C	RPP1	P38786	293 aa		2.74	□□□□□ -1.97
DOT6	YER088C	SHR5	P41912	237 aa		2.74	□□□□□ -1.97
DOT6	YER088C	MET13	P53128	600 aa		2.74	□□□□□ -1.97
DOT6	YER088C	SLI1	P53304	468 aa		2.74	□□□□□ -1.97
DOT6	YER088C	ARP4	P80428	489 aa		2.74	□□□□□ -1.97
DOT6	YER088C	NHX1	Q04121	633 aa		2.74	□□□□□ -1.97
DOT6	YER088C	COG8	Q04632	607 aa		2.74	□□□□□ -1.97
DOT6	YER088C	SWM1	Q12379	170 aa		2.74	□□□□□ -1.97
DOT6	YER088C	HMG1	P12683	1054 aa		2.73	□□□□□ -1.97
DOT6	YER088C	PMI40	P29952	429 aa	Known RBP	2.73	□□□□□ -1.97
DOT6	YER088C	CCR4	P31384	837 aa	Known RBP	2.73	□□□□□ -1.97
DOT6	YER088C	YKL222C	P35995	705 aa		2.73	□□□□□ -1.97
DOT6	YER088C	YKR018C	P36114	725 aa		2.73	□□□□□ -1.97
DOT6	YER088C	AIM14	P53109	570 aa		2.73	□□□□□ -1.97
DOT6	YER088C	KIN4	Q01919	800 aa		2.73	□□□□□ -1.97
DOT6	YER088C	UTP14	Q04500	899 aa	Known RBP	2.73	□□□□□ -1.97
DOT6	YER088C	CRR1	Q05790	422 aa		2.73	□□□□□ -1.97
DOT6	YER088C	TOP2	P06786	1428 aa	Known RBP	2.73	□□□□□ -1.97
DOT6	YER088C	MMS22	Q06164	1454 aa		2.73	□□□□□ -1.97
DOT6	YER088C	TY1B-JR2	P47100	1755 aa	Known RBP	2.73	□□□□□ -1.97
DOT6	YER088C	TY1B-ER2	Q03619	1755 aa		2.73	□□□□□ -1.97
DOT6	YER088C	TY1B-MR1	Q04214	1755 aa		2.73	□□□□□ -1.97
DOT6	YER088C	TY1B-MR2	Q04670	1755 aa	Known RBP	2.73	□□□□□ -1.97
DOT6	YER088C	TY1B-LR1	Q12088	1755 aa	Known RBP	2.73	□□□□□ -1.97
DOT6	YER088C	TY1B-NL1	Q12112	1755 aa		2.73	□□□□□ -1.97
DOT6	YER088C	TY1B-GR1	Q12141	1755 aa		2.73	□□□□□ -1.97
DOT6	YER088C	TY1B-BL	Q12490	1755 aa		2.73	□□□□□ -1.97
DOT6	YER088C	VPS15	P22219	1454 aa		2.73	□□□□□ -1.97
DOT6	YER088C	YLR415C	O13578	112 aa		2.73	□□□□□ -1.97
DOT6	YER088C	TRM2	P33753	639 aa		2.73	□□□□□ -1.97
DOT6	YER088C	MIP6	P38760	659 aa	Known RBP	2.73	□□□□□ -1.97
DOT6	YER088C	FPR3	P38911	411 aa	Known RBP	2.73	□□□□□ -1.97
DOT6	YER088C	PZF1	P39933	429 aa		2.73	□□□□□ -1.97
DOT6	YER088C	UBC9	P50623	157 aa	Predicted RBP	2.73	□□□□□ -1.97
DOT6	YER088C	YNR029C	P53729	429 aa	Known RBP	2.73	□□□□□ -1.97
DOT6	YER088C	YOR093C	Q12275	1648 aa		2.72	□□□□□ -1.97
DOT6	YER088C	TRM732	Q03496	1420 aa		2.72	□□□□□ -1.97
DOT6	YER088C	ADR1	P07248	1323 aa		2.72	□□□□□ -1.97
DOT6	YER088C	CAD1	P24813	409 aa	Known RBP	2.72	□□□□□ -1.97
DOT6	YER088C	YBR053C	P38235	358 aa		2.72	□□□□□ -1.97
DOT6	YER088C	HSL7	P38274	827 aa		2.72	□□□□□ -1.97
DOT6	YER088C	CHS7	P38843	316 aa		2.72	□□□□□ -1.97
DOT6	YER088C	RPN10	P38886	268 aa	Known RBP	2.72	□□□□□ -1.97
DOT6	YER088C	GPG1	P53130	126 aa		2.72	□□□□□ -1.97
DOT6	YER088C	SUN4	P53616	420 aa		2.72	□□□□□ -1.97
DOT6	YER088C	LEE1	Q02799	301 aa	Known RBP	2.72	□□□□□ -1.97
DOT6	YER088C	YLR040C	Q07988	224 aa		2.72	□□□□□ -1.97
DOT6	YER088C	PUS9	Q12069	462 aa		2.72	□□□□□ -1.97
DOT6	YER088C	NUP159	P40477	1460 aa		2.72	□□□□□ -1.97
DOT6	YER088C	EFT1	P32324	842 aa	Known RBP	2.71	□□□□□ -1.98
DOT6	YER088C	BRN1	P38170	754 aa		2.71	□□□□□ -1.98
DOT6	YER088C	GID8	P40208	455 aa		2.71	□□□□□ -1.98
DOT6	YER088C	NPY1	P53164	384 aa		2.71	□□□□□ -1.98
DOT6	YER088C	PKH1	Q03407	766 aa		2.71	□□□□□ -1.98
DOT6	YER088C	TGL5	Q12043	749 aa		2.71	□□□□□ -1.98
DOT6	YER088C	DCS2	Q12123	353 aa		2.71	□□□□□ -1.98
DOT6	YER088C	GIN4	Q12263	1142 aa		2.71	□□□□□ -1.98
DOT6	YER088C	RPO21	P04050	1733 aa	Known RBP	2.71	□□□□□ -1.98
DOT6	YER088C	NTE1	Q04958	1679 aa		2.71	□□□□□ -1.98
DOT6	YER088C	ADE2	P21264	571 aa	Known RBP	2.71	□□□□□ -1.98
DOT6	YER088C	HRR25	P29295	494 aa	Known RBP	2.71	□□□□□ -1.98

Retrieved 100 of 5,963 RNA–protein pairs in 292.8 ms