RNA–Protein interactions for RNA: YDR412W

RRP17, Transcript of Component of the pre-60S pre-ribosomal particle, yeastyeast

Gene RRP17, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP17YDR412W ATG2P53855 1592 aa5.83□□□□□ -1.48
RRP17YDR412W BCD1P38772 366 aa5.81□□□□□ -1.48
RRP17YDR412W SDS3P40505 327 aa5.81□□□□□ -1.48
RRP17YDR412W YIR042CP40586 236 aa5.81□□□□□ -1.48
RRP17YDR412W ZDS1P50111 915 aaKnown RBP5.81□□□□□ -1.48
RRP17YDR412W IRC10Q08118 586 aa5.81□□□□□ -1.48
RRP17YDR412W SUT2Q12286 268 aa5.81□□□□□ -1.48
RRP17YDR412W ERG6P25087 383 aaKnown RBP5.8□□□□□ -1.48
RRP17YDR412W VBA3P25594 458 aa5.8□□□□□ -1.48
RRP17YDR412W LYS9P38999 446 aa5.8□□□□□ -1.48
RRP17YDR412W QRI1P43123 477 aaKnown RBP5.8□□□□□ -1.48
RRP17YDR412W LAT1P12695 482 aaKnown RBP5.79□□□□□ -1.48
RRP17YDR412W ADE2P21264 571 aaKnown RBP5.79□□□□□ -1.48
RRP17YDR412W SCT1P32784 759 aa5.79□□□□□ -1.48
RRP17YDR412W SPC42P36094 363 aa5.79□□□□□ -1.48
RRP17YDR412W YKR051WP36142 418 aa5.79□□□□□ -1.48
RRP17YDR412W MTL1P53214 551 aa5.79□□□□□ -1.48
RRP17YDR412W PHO8P11491 566 aa5.78□□□□□ -1.48
RRP17YDR412W YHR112CP38716 378 aa5.78□□□□□ -1.48
RRP17YDR412W PCL5P38794 229 aa5.78□□□□□ -1.48
RRP17YDR412W DSS1P39112 969 aa5.78□□□□□ -1.48
RRP17YDR412W AMA1P50082 593 aa5.78□□□□□ -1.48
RRP17YDR412W MRH1Q12117 320 aaPredicted RBP5.78□□□□□ -1.48
RRP17YDR412W NGG1P32494 702 aa5.77□□□□□ -1.49
RRP17YDR412W HIS7P33734 552 aaKnown RBP5.77□□□□□ -1.49
RRP17YDR412W YHL017WP38745 532 aa5.77□□□□□ -1.49
RRP17YDR412W BAP3P41815 604 aa5.77□□□□□ -1.49
RRP17YDR412W CAF16P43569 289 aa5.77□□□□□ -1.49
RRP17YDR412W BNA2P47125 453 aa5.77□□□□□ -1.49
RRP17YDR412W LEE1Q02799 301 aaKnown RBP5.77□□□□□ -1.49
RRP17YDR412W UFD4P33202 1483 aa5.77□□□□□ -1.49
RRP17YDR412W MSH2P25847 964 aa5.76□□□□□ -1.49
RRP17YDR412W HIR1P32479 840 aa5.76□□□□□ -1.49
RRP17YDR412W STO1P34160 861 aaKnown RBP5.76□□□□□ -1.49
RRP17YDR412W HRB1P38922 454 aaKnown RBP RIP-Chip data5.76□□□□□ -1.49not detected
RRP17YDR412W PRP31P49704 494 aaPredicted RBP5.76□□□□□ -1.49
RRP17YDR412W UBC11P52492 156 aa5.76□□□□□ -1.49
RRP17YDR412W ARP4P80428 489 aa5.76□□□□□ -1.49
RRP17YDR412W SRD1P09007 221 aa5.75□□□□□ -1.49
RRP17YDR412W YBR259WP38338 688 aa5.75□□□□□ -1.49
RRP17YDR412W UBC9P50623 157 aaPredicted RBP5.75□□□□□ -1.49
RRP17YDR412W SNP1Q00916 300 aaPredicted RBP5.75□□□□□ -1.49
RRP17YDR412W MSL5Q12186 476 aaKnown RBP RIP-Chip data5.75□□□□□ -1.49not detected
RRP17YDR412W HRP1Q99383 534 aaKnown RBP5.75□□□□□ -1.49
RRP17YDR412W FMO1P38866 432 aa5.74□□□□□ -1.49
RRP17YDR412W GAD1Q04792 585 aa5.74□□□□□ -1.49
RRP17YDR412W YLR125WQ12138 136 aa5.74□□□□□ -1.49
RRP17YDR412W RAD18P10862 487 aa5.73□□□□□ -1.49
RRP17YDR412W THI4P32318 326 aa5.73□□□□□ -1.49
RRP17YDR412W MIP6P38760 659 aaKnown RBP5.73□□□□□ -1.49
RRP17YDR412W DAS1P47005 663 aa5.73□□□□□ -1.49
RRP17YDR412W ARG5,6Q01217 863 aa5.73□□□□□ -1.49
RRP17YDR412W HBT1Q07653 1046 aaKnown RBP5.73□□□□□ -1.49
RRP17YDR412W UBS1P38290 277 aa5.72□□□□□ -1.49
RRP17YDR412W FMP52P40008 231 aa5.72□□□□□ -1.49
RRP17YDR412W GET2P40056 285 aa5.72□□□□□ -1.49
RRP17YDR412W YFL052WP43551 465 aa5.72□□□□□ -1.49
RRP17YDR412W AIM14P53109 570 aa5.72□□□□□ -1.49
RRP17YDR412W NPY1P53164 384 aa5.72□□□□□ -1.49
RRP17YDR412W TIM44Q01852 431 aa5.72□□□□□ -1.49
RRP17YDR412W NTG2Q08214 380 aa5.72□□□□□ -1.49
RRP17YDR412W YCF1P39109 1515 aaKnown RBP5.72□□□□□ -1.49
RRP17YDR412W YPT53P36019 220 aa5.71□□□□□ -1.5
RRP17YDR412W ECM1P39715 212 aa5.71□□□□□ -1.5
RRP17YDR412W PAN2P53010 1115 aaPredicted RBP5.71□□□□□ -1.5
RRP17YDR412W TEL2P53038 688 aa5.71□□□□□ -1.5
RRP17YDR412W SGO1Q08490 590 aa5.71□□□□□ -1.5
RRP17YDR412W SIN3P22579 1536 aa5.7□□□□□ -1.5
RRP17YDR412W SIR3P06701 978 aa5.7□□□□□ -1.5
RRP17YDR412W HMG1P12683 1054 aa5.7□□□□□ -1.5
RRP17YDR412W HOG1P32485 435 aa5.7□□□□□ -1.5
RRP17YDR412W PEX6P33760 1030 aa5.7□□□□□ -1.5
RRP17YDR412W APL2P36000 726 aaPredicted RBP5.7□□□□□ -1.5
RRP17YDR412W TDP1P38319 544 aa5.7□□□□□ -1.5
RRP17YDR412W SFB3P38810 929 aa5.7□□□□□ -1.5
RRP17YDR412W YNL195CP40168 261 aa5.7□□□□□ -1.5
RRP17YDR412W CCT7P42943 550 aaKnown RBP5.7□□□□□ -1.5
RRP17YDR412W STU2P46675 888 aa5.7□□□□□ -1.5
RRP17YDR412W RIA1P53893 1110 aa5.7□□□□□ -1.5
RRP17YDR412W NHX1Q04121 633 aa5.7□□□□□ -1.5
RRP17YDR412W ATG11Q12527 1178 aa5.7□□□□□ -1.5
RRP17YDR412W PCL2P25693 308 aa5.69□□□□□ -1.5
RRP17YDR412W RPN10P38886 268 aaKnown RBP5.69□□□□□ -1.5
RRP17YDR412W HMO1Q03973 246 aaKnown RBP5.69□□□□□ -1.5
RRP17YDR412W RPN7Q06103 429 aaKnown RBP5.69□□□□□ -1.5
RRP17YDR412W YTA7P40340 1379 aa5.68□□□□□ -1.5
RRP17YDR412W SSK2P53599 1579 aa5.68□□□□□ -1.5
RRP17YDR412W CCT3P39077 534 aaKnown RBP5.68□□□□□ -1.5
RRP17YDR412W BRE5P53741 515 aaKnown RBP5.68□□□□□ -1.5
RRP17YDR412W ATG33Q06485 197 aa5.68□□□□□ -1.5
RRP17YDR412W MLH3Q12083 715 aa5.68□□□□□ -1.5
RRP17YDR412W GSY1P23337 708 aa5.67□□□□□ -1.5
RRP17YDR412W MVD1P32377 396 aaKnown RBP5.67□□□□□ -1.5
RRP17YDR412W YKR018CP36114 725 aa5.67□□□□□ -1.5
RRP17YDR412W CBR1P38626 284 aaKnown RBP5.67□□□□□ -1.5
RRP17YDR412W TAH11P47112 604 aa5.67□□□□□ -1.5
RRP17YDR412W PCL10P53124 433 aa5.67□□□□□ -1.5
RRP17YDR412W VPS73P53142 486 aaKnown RBP5.67□□□□□ -1.5
RRP17YDR412W YBP2P53169 641 aa5.67□□□□□ -1.5
RRP17YDR412W ORC4P54791 529 aa5.67□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 75.3 ms