RNA–Protein interactions for RNA: YDR351W

SBE2, Transcript of Protein required for bud growth, yeast

Gene SBE2, Length 2,595 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SBE2	YDR351W	VPS20	Q04272	221 aa		4.77	□□□□□ -1.65
SBE2	YDR351W	MGR3	Q04472	501 aa		4.77	□□□□□ -1.65
SBE2	YDR351W	DAL4	Q04895	635 aa		4.77	□□□□□ -1.65
SBE2	YDR351W	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	4.77	□□□□□ -1.65	not detected
SBE2	YDR351W	YTM1	Q12024	460 aa	Predicted RBP	4.77	□□□□□ -1.65
SBE2	YDR351W	YOR019W	Q99248	730 aa		4.77	□□□□□ -1.65
SBE2	YDR351W	LEU1	P07264	779 aa	Known RBP	4.77	□□□□□ -1.65
SBE2	YDR351W	TRM1	P15565	570 aa	Known RBP	4.77	□□□□□ -1.65
SBE2	YDR351W	ROX1	P25042	368 aa		4.77	□□□□□ -1.65
SBE2	YDR351W	RRP43	P25359	394 aa	Predicted RBP	4.77	□□□□□ -1.65
SBE2	YDR351W	SBA1	P28707	216 aa	Known RBP	4.77	□□□□□ -1.65
SBE2	YDR351W	DOA4	P32571	926 aa		4.77	□□□□□ -1.65
SBE2	YDR351W	LAS1	P36146	502 aa	Predicted RBP	4.77	□□□□□ -1.65
SBE2	YDR351W	SEA4	P38164	1038 aa		4.77	□□□□□ -1.65
SBE2	YDR351W	SOH1	P38633	127 aa		4.77	□□□□□ -1.65
SBE2	YDR351W	GDI1	P39958	451 aa	Known RBP	4.77	□□□□□ -1.65
SBE2	YDR351W	GCN20	P43535	752 aa	Known RBP	4.77	□□□□□ -1.65
SBE2	YDR351W	ARE2	P53629	642 aa	Known RBP	4.77	□□□□□ -1.65
SBE2	YDR351W	YNL035C	P53962	389 aa	Known RBP	4.77	□□□□□ -1.65
SBE2	YDR351W	DAK1	P54838	584 aa	Known RBP	4.77	□□□□□ -1.65
SBE2	YDR351W	LCD1	Q04377	747 aa		4.77	□□□□□ -1.65
SBE2	YDR351W	SWI6	P09959	803 aa		4.76	□□□□□ -1.65
SBE2	YDR351W	ENA1	P13587	1091 aa		4.76	□□□□□ -1.65
SBE2	YDR351W	THR4	P16120	514 aa	Known RBP	4.76	□□□□□ -1.65
SBE2	YDR351W	PRP6	P19735	899 aa	Predicted RBP	4.76	□□□□□ -1.65
SBE2	YDR351W	VPS3	P23643	1011 aa		4.76	□□□□□ -1.65
SBE2	YDR351W	HMX1	P32339	317 aa		4.76	□□□□□ -1.65
SBE2	YDR351W	GYP6	P32806	458 aa		4.76	□□□□□ -1.65
SBE2	YDR351W	YBR225W	P38321	900 aa		4.76	□□□□□ -1.65
SBE2	YDR351W	OSW5	P40219	148 aa		4.76	□□□□□ -1.65
SBE2	YDR351W	YFR006W	P43590	535 aa		4.76	□□□□□ -1.65
SBE2	YDR351W	PSP2	P50109	593 aa	Known RBP	4.76	□□□□□ -1.65
SBE2	YDR351W	AIM14	P53109	570 aa		4.76	□□□□□ -1.65
SBE2	YDR351W	UBP2	Q01476	1272 aa		4.76	□□□□□ -1.65
SBE2	YDR351W	ENA2	Q01896	1091 aa		4.76	□□□□□ -1.65
SBE2	YDR351W	PML39	Q03760	334 aa		4.76	□□□□□ -1.65
SBE2	YDR351W	RRN11	Q04712	507 aa		4.76	□□□□□ -1.65
SBE2	YDR351W	KAP95	Q06142	861 aa	Known RBP	4.76	□□□□□ -1.65
SBE2	YDR351W	ARR1	Q06596	294 aa		4.76	□□□□□ -1.65
SBE2	YDR351W	TSR1	Q07381	788 aa	Known RBP	4.76	□□□□□ -1.65
SBE2	YDR351W	YDL124W	Q07551	312 aa	Known RBP	4.76	□□□□□ -1.65
SBE2	YDR351W	TMA46	Q12000	345 aa	Known RBP	4.76	□□□□□ -1.65
SBE2	YDR351W	NSI1	Q12457	570 aa		4.76	□□□□□ -1.65
SBE2	YDR351W	ENA5	Q12691	1091 aa		4.76	□□□□□ -1.65
SBE2	YDR351W	SEC18	P18759	758 aa	Known RBP	4.76	□□□□□ -1.65
SBE2	YDR351W	PRP9	P19736	530 aa	Known RBP	4.76	□□□□□ -1.65
SBE2	YDR351W	DAL3	P32459	195 aa		4.76	□□□□□ -1.65
SBE2	YDR351W	SEC61	P32915	480 aa		4.76	□□□□□ -1.65
SBE2	YDR351W	PRP40	P33203	583 aa	Known RBP	4.76	□□□□□ -1.65
SBE2	YDR351W	LOT5	P34234	306 aa		4.76	□□□□□ -1.65
SBE2	YDR351W	YUH1	P35127	236 aa		4.76	□□□□□ -1.65
SBE2	YDR351W	SET3	P36124	751 aa		4.76	□□□□□ -1.65
SBE2	YDR351W	SIF2	P38262	535 aa		4.76	□□□□□ -1.65
SBE2	YDR351W	BIT2	P38346	545 aa		4.76	□□□□□ -1.65
SBE2	YDR351W	MSG5	P38590	489 aa		4.76	□□□□□ -1.65
SBE2	YDR351W	MTG2	P38860	518 aa		4.76	□□□□□ -1.65
SBE2	YDR351W	CCC2	P38995	1004 aa		4.76	□□□□□ -1.65
SBE2	YDR351W	DSS1	P39112	969 aa		4.76	□□□□□ -1.65
SBE2	YDR351W	YEL068C	P39977	110 aa		4.76	□□□□□ -1.65
SBE2	YDR351W	YJR039W	P47107	1121 aa		4.76	□□□□□ -1.65
SBE2	YDR351W	SNF12	P53628	566 aa		4.76	□□□□□ -1.65
SBE2	YDR351W	CNM67	P53865	581 aa	Known RBP	4.76	□□□□□ -1.65
SBE2	YDR351W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.76	□□□□□ -1.65	not detected
SBE2	YDR351W	CRN1	Q06440	651 aa		4.76	□□□□□ -1.65
SBE2	YDR351W	RRT8	Q08219	342 aa		4.76	□□□□□ -1.65
SBE2	YDR351W	MDY2	Q12285	212 aa		4.76	□□□□□ -1.65
SBE2	YDR351W	PDH1	Q12428	516 aa	Known RBP	4.76	□□□□□ -1.65
SBE2	YDR351W	YLR358C	O13565	187 aa		4.75	□□□□□ -1.65
SBE2	YDR351W	STE50	P25344	346 aa		4.75	□□□□□ -1.65
SBE2	YDR351W	VBA3	P25594	458 aa		4.75	□□□□□ -1.65
SBE2	YDR351W	PCL2	P25693	308 aa		4.75	□□□□□ -1.65
SBE2	YDR351W	GPI10	P30777	616 aa		4.75	□□□□□ -1.65
SBE2	YDR351W	SUR1	P33300	382 aa		4.75	□□□□□ -1.65
SBE2	YDR351W	DID4	P36108	232 aa		4.75	□□□□□ -1.65
SBE2	YDR351W	APM2	P38700	605 aa		4.75	□□□□□ -1.65
SBE2	YDR351W	MTW1	P39731	289 aa		4.75	□□□□□ -1.65
SBE2	YDR351W	NPR2	P39923	615 aa		4.75	□□□□□ -1.65
SBE2	YDR351W	GNP1	P48813	663 aa		4.75	□□□□□ -1.65
SBE2	YDR351W	MSN5	P52918	1224 aa		4.75	□□□□□ -1.65
SBE2	YDR351W	ZIP2	P53061	704 aa		4.75	□□□□□ -1.65
SBE2	YDR351W	RMT2	Q03305	412 aa		4.75	□□□□□ -1.65
SBE2	YDR351W	SSQ1	Q05931	657 aa	Predicted RBP	4.75	□□□□□ -1.65
SBE2	YDR351W	YCG1	Q06680	1035 aa		4.75	□□□□□ -1.65
SBE2	YDR351W	YOL114C	Q12322	202 aa		4.75	□□□□□ -1.65
SBE2	YDR351W	BI4	P03879	638 aa		4.75	□□□□□ -1.65
SBE2	YDR351W	CDC16	P09798	840 aa		4.75	□□□□□ -1.65
SBE2	YDR351W	POL3	P15436	1097 aa		4.75	□□□□□ -1.65
SBE2	YDR351W	RAD53	P22216	821 aa		4.75	□□□□□ -1.65
SBE2	YDR351W	HIR2	P32480	875 aa		4.75	□□□□□ -1.65
SBE2	YDR351W	ISC10	P32645	267 aa		4.75	□□□□□ -1.65
SBE2	YDR351W	YEL1	P34225	687 aa		4.75	□□□□□ -1.65
SBE2	YDR351W	SHM2	P37291	469 aa	Known RBP	4.75	□□□□□ -1.65
SBE2	YDR351W	SOL3	P38858	249 aa		4.75	□□□□□ -1.65
SBE2	YDR351W	YHB1	P39676	399 aa	Known RBP	4.75	□□□□□ -1.65
SBE2	YDR351W	GZF3	P42944	551 aa	Known RBP	4.75	□□□□□ -1.65
SBE2	YDR351W	ALG2	P43636	503 aa		4.75	□□□□□ -1.65
SBE2	YDR351W	YBP2	P53169	641 aa		4.75	□□□□□ -1.65
SBE2	YDR351W	TOF1	P53840	1238 aa		4.75	□□□□□ -1.65
SBE2	YDR351W	CEG1	Q01159	459 aa	Predicted RBP	4.75	□□□□□ -1.65
SBE2	YDR351W	MFB1	Q04922	465 aa		4.75	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms