RNA–Protein interactions for RNA: YBR163W

EXO5, Transcript of Mitochondrial 5'-3' exonuclease and sliding exonuclease, yeast

Gene EXO5, Length 1,758 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
EXO5	YBR163W	RPL8B	P29453	256 aa	Known RBP	4.14	□□□□□ -1.75
EXO5	YBR163W	HBS1	P32769	611 aa	Known RBP	4.14	□□□□□ -1.75
EXO5	YBR163W	AFR1	P33304	620 aa		4.14	□□□□□ -1.75
EXO5	YBR163W	TIM54	P47045	478 aa		4.14	□□□□□ -1.75
EXO5	YBR163W	MCM6	P53091	1017 aa	Known RBP	4.14	□□□□□ -1.75
EXO5	YBR163W	CSI1	Q04368	295 aa		4.14	□□□□□ -1.75
EXO5	YBR163W	NOP12	Q08208	459 aa	Known RBP	4.14	□□□□□ -1.75
EXO5	YBR163W	OSH2	Q12451	1283 aa		4.14	□□□□□ -1.75
EXO5	YBR163W	SWI1	P09547	1314 aa		4.13	□□□□□ -1.75
EXO5	YBR163W	HIS5	P07172	385 aa		4.13	□□□□□ -1.75
EXO5	YBR163W	NUP133	P36161	1157 aa		4.13	□□□□□ -1.75
EXO5	YBR163W	PLB1	P39105	664 aa		4.13	□□□□□ -1.75
EXO5	YBR163W	ERP6	P53198	216 aa		4.13	□□□□□ -1.75
EXO5	YBR163W	YPR071W	Q12346	211 aa		4.13	□□□□□ -1.75
EXO5	YBR163W	LPD1	P09624	499 aa	Known RBP	4.12	□□□□□ -1.75
EXO5	YBR163W	YKR078W	P36158	585 aa	Known RBP	4.12	□□□□□ -1.75
EXO5	YBR163W	SIT1	P39980	628 aa		4.12	□□□□□ -1.75
EXO5	YBR163W	PKH1	Q03407	766 aa		4.12	□□□□□ -1.75
EXO5	YBR163W	WHI4	Q07655	649 aa	Known RBP	4.12	□□□□□ -1.75
EXO5	YBR163W	LYS2	P07702	1392 aa		4.12	□□□□□ -1.75
EXO5	YBR163W	RPC82	P32349	654 aa		4.12	□□□□□ -1.75
EXO5	YBR163W	CDC11	P32458	415 aa		4.12	□□□□□ -1.75
EXO5	YBR163W	MNN10	P50108	393 aa	Known RBP	4.12	□□□□□ -1.75
EXO5	YBR163W	YGR125W	P53273	1036 aa		4.12	□□□□□ -1.75
EXO5	YBR163W	UTP8	P53276	713 aa	Known RBP	4.12	□□□□□ -1.75
EXO5	YBR163W	MDG1	P53885	366 aa		4.12	□□□□□ -1.75
EXO5	YBR163W	DNM1	P54861	757 aa		4.12	□□□□□ -1.75
EXO5	YBR163W	LCD1	Q04377	747 aa		4.12	□□□□□ -1.75
EXO5	YBR163W	NOT3	P06102	836 aa	Known RBP	4.11	□□□□□ -1.75
EXO5	YBR163W	HSP60	P19882	572 aa	Known RBP	4.11	□□□□□ -1.75
EXO5	YBR163W	RAI1	P53063	387 aa	Known RBP	4.11	□□□□□ -1.75
EXO5	YBR163W	RIM15	P43565	1770 aa		4.11	□□□□□ -1.75
EXO5	YBR163W	RPP2A	P05319	106 aa	Known RBP	4.1	□□□□□ -1.75
EXO5	YBR163W	TOK1	P40310	691 aa		4.1	□□□□□ -1.75
EXO5	YBR163W	YJR008W	P47085	338 aa		4.1	□□□□□ -1.75
EXO5	YBR163W	CCM1	P48237	864 aa	Predicted RBP	4.1	□□□□□ -1.75
EXO5	YBR163W	HBN1	Q96VH4	193 aa		4.1	□□□□□ -1.75
EXO5	YBR163W	STE11	P23561	717 aa		4.09	□□□□□ -1.75
EXO5	YBR163W	SMY1	P32364	656 aa	Known RBP	4.09	□□□□□ -1.75
EXO5	YBR163W	REC104	P33323	182 aa		4.09	□□□□□ -1.75
EXO5	YBR163W	CHA4	P43634	648 aa		4.09	□□□□□ -1.75
EXO5	YBR163W	YRB30	P53107	440 aa	Predicted RBP	4.09	□□□□□ -1.75
EXO5	YBR163W	KIN4	Q01919	800 aa		4.09	□□□□□ -1.75
EXO5	YBR163W	BDF2	Q07442	638 aa		4.09	□□□□□ -1.75
EXO5	YBR163W	MSD1	P15179	658 aa	Known RBP	4.09	□□□□□ -1.76
EXO5	YBR163W	RFA1	P22336	621 aa	Known RBP	4.09	□□□□□ -1.76
EXO5	YBR163W	HCM1	P25364	564 aa		4.09	□□□□□ -1.76
EXO5	YBR163W	FRD1	P32614	470 aa	Known RBP	4.09	□□□□□ -1.76
EXO5	YBR163W	ATG19	P35193	415 aa		4.09	□□□□□ -1.76
EXO5	YBR163W	YNG2	P38806	282 aa	Known RBP	4.09	□□□□□ -1.76
EXO5	YBR163W	UBP12	P39538	1254 aa		4.09	□□□□□ -1.76
EXO5	YBR163W	YJL049W	P47048	450 aa		4.09	□□□□□ -1.76
EXO5	YBR163W	YKE2	P52553	114 aa		4.09	□□□□□ -1.76
EXO5	YBR163W	HUL5	P53119	910 aa		4.09	□□□□□ -1.76
EXO5	YBR163W	BUL2	Q03758	920 aa	Known RBP	4.09	□□□□□ -1.76
EXO5	YBR163W	FLC1	Q08967	793 aa		4.09	□□□□□ -1.76
EXO5	YBR163W	CIT1	P00890	479 aa		4.08	□□□□□ -1.76
EXO5	YBR163W	RPS19A	P07280	144 aa	Known RBP	4.08	□□□□□ -1.76
EXO5	YBR163W	RPS19B	P07281	144 aa	Predicted RBP	4.08	□□□□□ -1.76
EXO5	YBR163W	TOP3	P13099	656 aa		4.08	□□□□□ -1.76
EXO5	YBR163W	RPD3	P32561	433 aa		4.08	□□□□□ -1.76
EXO5	YBR163W	CEP3	P40969	608 aa		4.08	□□□□□ -1.76
EXO5	YBR163W	PHO23	P50947	330 aa		4.08	□□□□□ -1.76
EXO5	YBR163W	SPO1	P53541	631 aa		4.08	□□□□□ -1.76
EXO5	YBR163W	SSL1	Q04673	461 aa	Predicted RBP	4.08	□□□□□ -1.76
EXO5	YBR163W	NPC2	Q12408	173 aa		4.08	□□□□□ -1.76
EXO5	YBR163W	KCS1	Q12494	1050 aa		4.08	□□□□□ -1.76
EXO5	YBR163W	TUB2	P02557	457 aa	Known RBP	4.07	□□□□□ -1.76
EXO5	YBR163W	STE13	P33894	931 aa		4.07	□□□□□ -1.76
EXO5	YBR163W	PET10	P36139	283 aa		4.07	□□□□□ -1.76
EXO5	YBR163W	PFF1	P38244	976 aa		4.07	□□□□□ -1.76
EXO5	YBR163W	YBR238C	P38330	731 aa	Known RBP	4.07	□□□□□ -1.76
EXO5	YBR163W	YHR020W	P38708	688 aa	Known RBP	4.07	□□□□□ -1.76
EXO5	YBR163W	HUL4	P40985	892 aa		4.07	□□□□□ -1.76
EXO5	YBR163W	NNF1	P47149	201 aa		4.07	□□□□□ -1.76
EXO5	YBR163W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
EXO5	YBR163W	UBP16	Q02863	499 aa		4.07	□□□□□ -1.76
EXO5	YBR163W	VPS30	Q02948	557 aa		4.07	□□□□□ -1.76
EXO5	YBR163W	IRC3	Q06683	689 aa		4.07	□□□□□ -1.76
EXO5	YBR163W	YDL124W	Q07551	312 aa	Known RBP	4.07	□□□□□ -1.76
EXO5	YBR163W	CDC53	Q12018	815 aa	Known RBP	4.07	□□□□□ -1.76
EXO5	YBR163W	CTT1	P06115	562 aa		4.07	□□□□□ -1.76
EXO5	YBR163W	ICL1	P28240	557 aa	Predicted RBP	4.07	□□□□□ -1.76
EXO5	YBR163W	URM1	P40554	99 aa	Predicted RBP	4.07	□□□□□ -1.76
EXO5	YBR163W	NCS6	P53088	359 aa		4.07	□□□□□ -1.76
EXO5	YBR163W	SYF1	Q04048	859 aa	Predicted RBP	4.07	□□□□□ -1.76
EXO5	YBR163W	TOP1	P04786	769 aa		4.06	□□□□□ -1.76
EXO5	YBR163W	TOM70	P07213	617 aa	Known RBP	4.06	□□□□□ -1.76
EXO5	YBR163W	SED4	P25365	1065 aa		4.06	□□□□□ -1.76
EXO5	YBR163W	YIL108W	P40483	696 aa	Known RBP	4.06	□□□□□ -1.76
EXO5	YBR163W	ERO1	Q03103	563 aa		4.06	□□□□□ -1.76
EXO5	YBR163W	UPC2	Q12151	913 aa		4.06	□□□□□ -1.76
EXO5	YBR163W	SSK22	P25390	1331 aa	Predicted RBP	4.06	□□□□□ -1.76
EXO5	YBR163W	CAD1	P24813	409 aa	Known RBP	4.05	□□□□□ -1.76
EXO5	YBR163W	MGM1	P32266	881 aa		4.05	□□□□□ -1.76
EXO5	YBR163W	TRM2	P33753	639 aa		4.05	□□□□□ -1.76
EXO5	YBR163W	RSP5	P39940	809 aa	Known RBP	4.05	□□□□□ -1.76
EXO5	YBR163W	RPT4	P53549	437 aa	Known RBP	4.05	□□□□□ -1.76
EXO5	YBR163W	THI3	Q07471	609 aa		4.05	□□□□□ -1.76
EXO5	YBR163W	NTO1	Q12311	748 aa		4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 9.8 ms