RNA–Protein interactions for RNA: snR50

snR50, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR50, Length 90 nt, Biotype snoRNA.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR50snR50 CDC48P25694 835 aaKnown RBP0.63□□□□□ -2.31
snR50snR50 CCR4P31384 837 aaKnown RBP0.63□□□□□ -2.31
snR50snR50 MET4P32389 672 aa0.63□□□□□ -2.31
snR50snR50 LYP1P32487 611 aa0.63□□□□□ -2.31
snR50snR50 UGP1P32861 499 aaKnown RBP0.63□□□□□ -2.31
snR50snR50 ARC40P38328 384 aaKnown RBP0.63□□□□□ -2.31
snR50snR50 SAH1P39954 449 aaKnown RBP0.63□□□□□ -2.31
snR50snR50 AAT1Q01802 451 aa0.63□□□□□ -2.31
snR50snR50 PKH1Q03407 766 aa0.63□□□□□ -2.31
snR50snR50 HFD1Q04458 532 aa0.63□□□□□ -2.31
snR50snR50 SMA2Q04658 369 aa0.63□□□□□ -2.31
snR50snR50 ORM2Q06144 216 aa0.63□□□□□ -2.31
snR50snR50 IRC3Q06683 689 aa0.63□□□□□ -2.31
snR50snR50 SUB2Q07478 446 aaKnown RBP0.63□□□□□ -2.31
snR50snR50 RTT10Q08924 1013 aa0.63□□□□□ -2.31
snR50snR50 YBL113CQ7M4S9 792 aa0.63□□□□□ -2.31
snR50snR50 YKL033W-AQ86ZR7 236 aa0.63□□□□□ -2.31
snR50snR50 RAD2P07276 1031 aa0.62□□□□□ -2.31
snR50snR50 RPA135P22138 1203 aaKnown RBP0.62□□□□□ -2.31
snR50snR50 TSR4P25040 408 aa0.62□□□□□ -2.31
snR50snR50 TYE7P33122 291 aaPredicted RBP0.62□□□□□ -2.31
snR50snR50 YKL107WP34251 309 aa0.62□□□□□ -2.31
snR50snR50 HOT13P36078 116 aa0.62□□□□□ -2.31
snR50snR50 GMH1P36125 273 aa0.62□□□□□ -2.31
snR50snR50 SIC1P38634 284 aa0.62□□□□□ -2.31
snR50snR50 CCT3P39077 534 aaKnown RBP0.62□□□□□ -2.31
snR50snR50 ECM1P39715 212 aa0.62□□□□□ -2.31
snR50snR50 YIL108WP40483 696 aaKnown RBP0.62□□□□□ -2.31
snR50snR50 VHR1P40522 640 aa0.62□□□□□ -2.31
snR50snR50 MNT3P40549 630 aa0.62□□□□□ -2.31
snR50snR50 TAX4P47030 604 aa0.62□□□□□ -2.31
snR50snR50 FHN1P53279 174 aa0.62□□□□□ -2.31
snR50snR50 RPL34AP87262 121 aaPredicted RBP0.62□□□□□ -2.31
snR50snR50 YKR011CQ02209 353 aa0.62□□□□□ -2.31
snR50snR50 FMP30Q02883 468 aa0.62□□□□□ -2.31
snR50snR50 YPR196WQ06595 470 aa0.62□□□□□ -2.31
snR50snR50 YPL066WQ12194 479 aa0.62□□□□□ -2.31
snR50snR50 CLF1Q12309 687 aaPredicted RBP0.62□□□□□ -2.31
snR50snR50 INO1P11986 533 aa0.61□□□□□ -2.31
snR50snR50 CYC8P14922 966 aa0.61□□□□□ -2.31
snR50snR50 LSB5P25369 354 aa0.61□□□□□ -2.31
snR50snR50 KCC4P25389 1037 aa0.61□□□□□ -2.31
snR50snR50 FUB1P25659 250 aa0.61□□□□□ -2.31
snR50snR50 PIN4P34217 668 aaKnown RBP RIP-Chip data0.61□□□□□ -2.31not detected
snR50snR50 YBR139WP38109 508 aa0.61□□□□□ -2.31
snR50snR50 RTT107P38850 1070 aa0.61□□□□□ -2.31
snR50snR50 FAA2P39518 744 aa0.61□□□□□ -2.31
snR50snR50 SRL1Q08673 210 aa0.61□□□□□ -2.31
snR50snR50 TGL5Q12043 749 aa0.61□□□□□ -2.31
snR50snR50 ULA1Q12059 462 aa0.61□□□□□ -2.31
snR50snR50 TRP2P00899 507 aaKnown RBP0.6□□□□□ -2.31
snR50snR50 TUP1P16649 713 aa0.6□□□□□ -2.31
snR50snR50 CLN2P20438 545 aa0.6□□□□□ -2.31
snR50snR50 YMC1P32331 307 aa0.6□□□□□ -2.31
snR50snR50 BEM3P32873 1128 aa0.6□□□□□ -2.31
snR50snR50 RPT1P33299 467 aaKnown RBP0.6□□□□□ -2.31
snR50snR50 YEL1P34225 687 aa0.6□□□□□ -2.31
snR50snR50 YMC2P38087 329 aa0.6□□□□□ -2.31
snR50snR50 YBR259WP38338 688 aa0.6□□□□□ -2.31
snR50snR50 YHL050CP38721 697 aa0.6□□□□□ -2.31
snR50snR50 YHR219WP38900 624 aa0.6□□□□□ -2.31
snR50snR50 PZF1P39933 429 aa0.6□□□□□ -2.31
snR50snR50 JHD1P40034 492 aa0.6□□□□□ -2.31
snR50snR50 SKP2P42843 763 aa0.6□□□□□ -2.31
snR50snR50 NMD5P46970 1048 aa0.6□□□□□ -2.31
snR50snR50 HDA1P53973 706 aa0.6□□□□□ -2.31
snR50snR50 ERG13P54839 491 aaKnown RBP0.6□□□□□ -2.31
snR50snR50 MUS81Q04149 632 aaPredicted RBP0.6□□□□□ -2.31
snR50snR50 RTT103Q05543 409 aa0.6□□□□□ -2.31
snR50snR50 BUD7Q08754 746 aa0.6□□□□□ -2.31
snR50snR50 BMS1Q08965 1183 aaKnown RBP0.6□□□□□ -2.31
snR50snR50 CDC3P32457 520 aaKnown RBP0.59□□□□□ -2.31
snR50snR50 RPD3P32561 433 aa0.59□□□□□ -2.31
snR50snR50 SCT1P32784 759 aa0.59□□□□□ -2.31
snR50snR50 PMC1P38929 1173 aaPredicted RBP0.59□□□□□ -2.31
snR50snR50 MIT1P40002 666 aa0.59□□□□□ -2.31
snR50snR50 SNO3P43544 222 aa0.59□□□□□ -2.31
snR50snR50 GUS1P46655 708 aaKnown RBP RIP-Chip data0.59□□□□□ -2.31not detected
snR50snR50 JSN1P47135 1091 aaKnown RBP RIP-Chip data0.59□□□□□ -2.31not detected
snR50snR50 PAN2P53010 1115 aaPredicted RBP0.59□□□□□ -2.31
snR50snR50 TYW3P53177 273 aa0.59□□□□□ -2.31
snR50snR50 DUS1P53759 423 aaKnown RBP0.59□□□□□ -2.31
snR50snR50 TEX1P53851 422 aaKnown RBP0.59□□□□□ -2.31
snR50snR50 MRPL1Q04599 285 aa0.59□□□□□ -2.31
snR50snR50 YPR089WO13585 888 aa0.58□□□□□ -2.32
snR50snR50 PHO5P00635 467 aa0.58□□□□□ -2.32
snR50snR50 THR1P17423 357 aaKnown RBP0.58□□□□□ -2.32
snR50snR50 RFA1P22336 621 aaKnown RBP0.58□□□□□ -2.32
snR50snR50 NPP1P25353 742 aa0.58□□□□□ -2.32
snR50snR50 URA1P28272 314 aaPredicted RBP0.58□□□□□ -2.32
snR50snR50 MGM1P32266 881 aa0.58□□□□□ -2.32
snR50snR50 PHO11P35842 467 aa0.58□□□□□ -2.32
snR50snR50 PHO12P38693 467 aa0.58□□□□□ -2.32
snR50snR50 SFB3P38810 929 aa0.58□□□□□ -2.32
snR50snR50 NUP60P39705 539 aa0.58□□□□□ -2.32
snR50snR50 OAF1P39720 1047 aaPredicted RBP0.58□□□□□ -2.32
snR50snR50 SIT1P39980 628 aa0.58□□□□□ -2.32
snR50snR50 UBP7P40453 1071 aa0.58□□□□□ -2.32
snR50snR50 PFA3P42836 336 aa0.58□□□□□ -2.32
snR50snR50 KRI1P42846 591 aaKnown RBP0.58□□□□□ -2.32
Retrieved 100 of 5,963 RNA–protein pairs in 24.9 ms