RNA–Protein interactions for RNA: YPL085W

SEC16, Transcript of COPII vesicle coat protein required for ER transport vesicle budding, yeastyeast

Gene SEC16, Length 6,588 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC16YPL085W BNI1P41832 1953 aa2.35□□□□□ -2.03
SEC16YPL085W LAT1P12695 482 aaKnown RBP2.35□□□□□ -2.03
SEC16YPL085W GLN1P32288 370 aaKnown RBP2.35□□□□□ -2.03
SEC16YPL085W PSE1P32337 1089 aaKnown RBP2.35□□□□□ -2.03
SEC16YPL085W SPT16P32558 1035 aaKnown RBP2.35□□□□□ -2.03
SEC16YPL085W YME2P32843 850 aa2.35□□□□□ -2.03
SEC16YPL085W LST4P34239 828 aa2.35□□□□□ -2.03
SEC16YPL085W TRZ1P36159 838 aaPredicted RBP2.35□□□□□ -2.03
SEC16YPL085W UBP14P38237 781 aaKnown RBP2.35□□□□□ -2.03
SEC16YPL085W YHL008CP38750 627 aa2.35□□□□□ -2.03
SEC16YPL085W RTT105P40063 208 aa2.35□□□□□ -2.03
SEC16YPL085W ARG2P40360 574 aa2.35□□□□□ -2.03
SEC16YPL085W SCD6P45978 349 aaKnown RBP RIP-Chip data2.35□□□□□ -2.03 RIP-Chip
SEC16YPL085W YJR054WP47114 497 aa2.35□□□□□ -2.03
SEC16YPL085W IST1P53843 298 aaPredicted RBP2.35□□□□□ -2.03
SEC16YPL085W SLM2P53955 656 aa2.35□□□□□ -2.03
SEC16YPL085W HMO1Q03973 246 aaKnown RBP2.35□□□□□ -2.03
SEC16YPL085W RRP40Q08285 240 aaKnown RBP2.35□□□□□ -2.03
SEC16YPL085W GTT2Q12390 233 aa2.35□□□□□ -2.03
SEC16YPL085W CET1O13297 549 aaPredicted RBP2.35□□□□□ -2.03
SEC16YPL085W KTR2P33550 425 aa2.35□□□□□ -2.03
SEC16YPL085W TRM2P33753 639 aa2.35□□□□□ -2.03
SEC16YPL085W CDC27P38042 758 aa2.35□□□□□ -2.03
SEC16YPL085W RIM4P38741 713 aa2.35□□□□□ -2.03
SEC16YPL085W KEL1P38853 1164 aaKnown RBP2.35□□□□□ -2.03
SEC16YPL085W RGA1P39083 1007 aa2.35□□□□□ -2.03
SEC16YPL085W RPL34BP40525 121 aaKnown RBP2.35□□□□□ -2.03
SEC16YPL085W SAP185P40856 1058 aa2.35□□□□□ -2.03
SEC16YPL085W RIM21P48565 533 aa2.35□□□□□ -2.03
SEC16YPL085W SSL1Q04673 461 aaPredicted RBP2.35□□□□□ -2.03
SEC16YPL085W CSC1Q06538 782 aa2.35□□□□□ -2.03
SEC16YPL085W CDC24P11433 854 aaPredicted RBP2.35□□□□□ -2.03
SEC16YPL085W ARG8P18544 423 aa2.35□□□□□ -2.03
SEC16YPL085W AEP2P22136 580 aa2.35□□□□□ -2.03
SEC16YPL085W NIP1P32497 812 aaKnown RBP2.35□□□□□ -2.03
SEC16YPL085W MYO3P36006 1272 aa2.35□□□□□ -2.03
SEC16YPL085W MCD4P36051 919 aa2.35□□□□□ -2.03
SEC16YPL085W TVP38P36164 337 aa2.35□□□□□ -2.03
SEC16YPL085W ATG12P38316 186 aa2.35□□□□□ -2.03
SEC16YPL085W YHR112CP38716 378 aa2.35□□□□□ -2.03
SEC16YPL085W PEA2P40091 420 aa2.35□□□□□ -2.03
SEC16YPL085W MDE1P47095 244 aa2.35□□□□□ -2.03
SEC16YPL085W YPR003CP53394 754 aa2.35□□□□□ -2.03
SEC16YPL085W SND1Q04007 877 aa2.35□□□□□ -2.03
SEC16YPL085W VTI1Q04338 217 aa2.35□□□□□ -2.03
SEC16YPL085W RSA3Q05942 220 aaKnown RBP2.35□□□□□ -2.03
SEC16YPL085W COBP00163 385 aa2.35□□□□□ -2.03
SEC16YPL085W RPP2AP05319 106 aaKnown RBP2.35□□□□□ -2.03
SEC16YPL085W DCD1P06773 312 aa2.35□□□□□ -2.03
SEC16YPL085W NMT1P14743 455 aa2.35□□□□□ -2.03
SEC16YPL085W POL30P15873 258 aaKnown RBP2.35□□□□□ -2.03
SEC16YPL085W PRP4P20053 465 aaKnown RBP2.35□□□□□ -2.03
SEC16YPL085W CWH43P25618 953 aa2.35□□□□□ -2.03
SEC16YPL085W HXT1P32465 570 aa2.35□□□□□ -2.03
SEC16YPL085W SEC6P32844 805 aa2.35□□□□□ -2.03
SEC16YPL085W XRS2P33301 854 aa2.35□□□□□ -2.03
SEC16YPL085W CBF5P33322 483 aaKnown RBP RIP-Chip data2.35□□□□□ -2.03not detected
SEC16YPL085W DSF2P38213 736 aa2.35□□□□□ -2.03
SEC16YPL085W FAA3P39002 694 aa2.35□□□□□ -2.03
SEC16YPL085W FRT2P39734 528 aa2.35□□□□□ -2.03
SEC16YPL085W NOP15P53927 220 aaPredicted RBP2.35□□□□□ -2.03
SEC16YPL085W YLR287CQ05881 355 aa2.35□□□□□ -2.03
SEC16YPL085W VAC14Q06708 880 aa2.35□□□□□ -2.03
SEC16YPL085W DNL4Q08387 944 aaPredicted RBP2.35□□□□□ -2.03
SEC16YPL085W YPL277CQ08989 487 aa2.35□□□□□ -2.03
SEC16YPL085W CBS2P14905 389 aa2.34□□□□□ -2.03
SEC16YPL085W PUT4P15380 627 aa2.34□□□□□ -2.03
SEC16YPL085W SPO11P23179 398 aa2.34□□□□□ -2.03
SEC16YPL085W MSH2P25847 964 aa2.34□□□□□ -2.03
SEC16YPL085W GRX7P38068 203 aa2.34□□□□□ -2.03
SEC16YPL085W SWM2P40342 146 aa2.34□□□□□ -2.03
SEC16YPL085W RRN7P40992 514 aa2.34□□□□□ -2.03
SEC16YPL085W DAS1P47005 663 aa2.34□□□□□ -2.03
SEC16YPL085W VPS70P47161 811 aa2.34□□□□□ -2.03
SEC16YPL085W YGR117CP53270 476 aa2.34□□□□□ -2.03
SEC16YPL085W GOR1P53839 350 aa2.34□□□□□ -2.03
SEC16YPL085W RPL34AP87262 121 aaPredicted RBP2.34□□□□□ -2.03
SEC16YPL085W IRC15Q02733 499 aa2.34□□□□□ -2.03
SEC16YPL085W WAR1Q03631 944 aa2.34□□□□□ -2.03
SEC16YPL085W VPS38Q05919 439 aa2.34□□□□□ -2.03
SEC16YPL085W SNF3P10870 884 aa2.34□□□□□ -2.03
SEC16YPL085W MSD1P15179 658 aaKnown RBP2.34□□□□□ -2.03
SEC16YPL085W EFB1P32471 206 aaKnown RBP2.34□□□□□ -2.03
SEC16YPL085W COX13P32799 129 aa2.34□□□□□ -2.03
SEC16YPL085W KES1P35844 434 aaKnown RBP2.34□□□□□ -2.03
SEC16YPL085W SPT8P38915 602 aa2.34□□□□□ -2.03
SEC16YPL085W RPN3P40016 523 aaKnown RBP2.34□□□□□ -2.03
SEC16YPL085W MND1P53102 219 aa2.34□□□□□ -2.03
SEC16YPL085W HOS3Q02959 697 aaKnown RBP2.34□□□□□ -2.03
SEC16YPL085W NGL3Q03210 505 aa2.34□□□□□ -2.03
SEC16YPL085W RMD1Q03441 430 aa2.34□□□□□ -2.03
SEC16YPL085W AIM32Q04689 311 aa2.34□□□□□ -2.03
SEC16YPL085W RCN2Q12044 265 aa2.34□□□□□ -2.03
SEC16YPL085W DCS2Q12123 353 aa2.34□□□□□ -2.03
SEC16YPL085W TCA17P32613 152 aa2.34□□□□□ -2.03
SEC16YPL085W MUD2P36084 527 aaKnown RBP2.34□□□□□ -2.03
SEC16YPL085W YAP5P40574 245 aa2.34□□□□□ -2.03
SEC16YPL085W FRK1Q03002 865 aaPredicted RBP2.34□□□□□ -2.03
SEC16YPL085W BLS1Q06071 122 aa2.34□□□□□ -2.03
SEC16YPL085W TY4A-HQ6Q5P6 413 aa2.34□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 72.7 ms