RNA–Protein interactions for RNA: YOR260W

GCD1, Transcript of Gamma subunit of the translation initiation factor eIF2B, yeast

Gene GCD1, Length 1,737 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GCD1	YOR260W	MSE1	P48525	536 aa		4.69	□□□□□ -1.66
GCD1	YOR260W	NCS6	P53088	359 aa		4.69	□□□□□ -1.66
GCD1	YOR260W	PPM2	Q08282	695 aa		4.69	□□□□□ -1.66
GCD1	YOR260W	PUS9	Q12069	462 aa		4.69	□□□□□ -1.66
GCD1	YOR260W	CAN1	P04817	590 aa		4.68	□□□□□ -1.66
GCD1	YOR260W	YKL091C	P33324	310 aa	Known RBP	4.68	□□□□□ -1.66
GCD1	YOR260W	RAI1	P53063	387 aa	Known RBP	4.68	□□□□□ -1.66
GCD1	YOR260W	RPN4	Q03465	531 aa		4.68	□□□□□ -1.66
GCD1	YOR260W	POB3	Q04636	552 aa	Known RBP	4.68	□□□□□ -1.66
GCD1	YOR260W	WHI4	Q07655	649 aa	Known RBP	4.68	□□□□□ -1.66
GCD1	YOR260W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.67	□□□□□ -1.66	not detected
GCD1	YOR260W	MUM2	P38236	366 aa		4.67	□□□□□ -1.66
GCD1	YOR260W	ERR1	P0CX10	437 aa		4.66	□□□□□ -1.66
GCD1	YOR260W	ERR2	P0CX11	437 aa		4.66	□□□□□ -1.66
GCD1	YOR260W	RPN12	P32496	274 aa		4.66	□□□□□ -1.66
GCD1	YOR260W	CEF1	Q03654	590 aa	Predicted RBP	4.66	□□□□□ -1.66
GCD1	YOR260W	LCD1	Q04377	747 aa		4.66	□□□□□ -1.66
GCD1	YOR260W	PNS1	Q12412	539 aa		4.66	□□□□□ -1.66
GCD1	YOR260W	HSL1	P34244	1518 aa		4.66	□□□□□ -1.66
GCD1	YOR260W	PET10	P36139	283 aa		4.66	□□□□□ -1.66
GCD1	YOR260W	SUN4	P53616	420 aa		4.66	□□□□□ -1.66
GCD1	YOR260W	MDM1	Q01846	1127 aa		4.66	□□□□□ -1.66
GCD1	YOR260W	NOT3	P06102	836 aa	Known RBP	4.65	□□□□□ -1.67
GCD1	YOR260W	CDC11	P32458	415 aa		4.65	□□□□□ -1.67
GCD1	YOR260W	GRX7	P38068	203 aa		4.65	□□□□□ -1.67
GCD1	YOR260W	HUL4	P40985	892 aa		4.65	□□□□□ -1.67
GCD1	YOR260W	UPC2	Q12151	913 aa		4.65	□□□□□ -1.67
GCD1	YOR260W	PFK1	P16861	987 aa	Known RBP	4.64	□□□□□ -1.67
GCD1	YOR260W	TIM23	P32897	222 aa		4.64	□□□□□ -1.67
GCD1	YOR260W	MSS4	P38994	779 aa		4.64	□□□□□ -1.67
GCD1	YOR260W	MNN1	P39106	762 aa		4.64	□□□□□ -1.67
GCD1	YOR260W	YEN1	P40028	759 aa		4.64	□□□□□ -1.67
GCD1	YOR260W	CCM1	P48237	864 aa	Predicted RBP	4.64	□□□□□ -1.67
GCD1	YOR260W	KIN4	Q01919	800 aa		4.64	□□□□□ -1.67
GCD1	YOR260W	YDL124W	Q07551	312 aa	Known RBP	4.64	□□□□□ -1.67
GCD1	YOR260W	ENB1	Q08299	606 aa		4.64	□□□□□ -1.67
GCD1	YOR260W	LAS17	Q12446	633 aa		4.64	□□□□□ -1.67
GCD1	YOR260W	SPT6	P23615	1451 aa	Known RBP	4.64	□□□□□ -1.67
GCD1	YOR260W	REC104	P33323	182 aa		4.63	□□□□□ -1.67
GCD1	YOR260W	UBP6	P43593	499 aa	Known RBP	4.63	□□□□□ -1.67
GCD1	YOR260W	YGL081W	P53156	320 aa		4.63	□□□□□ -1.67
GCD1	YOR260W	SLI1	P53304	468 aa		4.63	□□□□□ -1.67
GCD1	YOR260W	CTF4	Q01454	927 aa		4.63	□□□□□ -1.67
GCD1	YOR260W	IMH1	Q06704	911 aa	Known RBP	4.63	□□□□□ -1.67
GCD1	YOR260W	YOR378W	Q08902	515 aa		4.63	□□□□□ -1.67
GCD1	YOR260W	GUP2	Q08929	609 aa		4.63	□□□□□ -1.67
GCD1	YOR260W	YOR131C	Q12486	218 aa		4.63	□□□□□ -1.67
GCD1	YOR260W	KAR4	P25583	335 aa		4.63	□□□□□ -1.67
GCD1	YOR260W	STE13	P33894	931 aa		4.63	□□□□□ -1.67
GCD1	YOR260W	HOS2	P53096	452 aa	Predicted RBP	4.63	□□□□□ -1.67
GCD1	YOR260W	MPH2	P0CD99	609 aa		4.62	□□□□□ -1.67
GCD1	YOR260W	RPD3	P32561	433 aa		4.62	□□□□□ -1.67
GCD1	YOR260W	STE14	P32584	239 aa		4.62	□□□□□ -1.67
GCD1	YOR260W	IES5	P40060	125 aa		4.62	□□□□□ -1.67
GCD1	YOR260W	PEX8	P53248	589 aa		4.62	□□□□□ -1.67
GCD1	YOR260W	FOL1	P53848	824 aa		4.62	□□□□□ -1.67
GCD1	YOR260W	SSL1	Q04673	461 aa	Predicted RBP	4.62	□□□□□ -1.67
GCD1	YOR260W	YGR161W-C	Q3E744	92 aa		4.62	□□□□□ -1.67
GCD1	YOR260W	TOM70	P07213	617 aa	Known RBP	4.61	□□□□□ -1.67
GCD1	YOR260W	PIF1	P07271	859 aa		4.61	□□□□□ -1.67
GCD1	YOR260W	SED4	P25365	1065 aa		4.61	□□□□□ -1.67
GCD1	YOR260W	HRR25	P29295	494 aa	Known RBP	4.61	□□□□□ -1.67
GCD1	YOR260W	SWI3	P32591	825 aa		4.61	□□□□□ -1.67
GCD1	YOR260W	GGA2	P38817	585 aa	Known RBP	4.61	□□□□□ -1.67
GCD1	YOR260W	CHS7	P38843	316 aa		4.61	□□□□□ -1.67
GCD1	YOR260W	MEP1	P40260	492 aa		4.61	□□□□□ -1.67
GCD1	YOR260W	YDR341C	Q05506	607 aa	Known RBP	4.61	□□□□□ -1.67
GCD1	YOR260W	ENV7	Q12003	364 aa		4.61	□□□□□ -1.67
GCD1	YOR260W	FBP1	P09201	348 aa		4.6	□□□□□ -1.67
GCD1	YOR260W	SCT1	P32784	759 aa		4.6	□□□□□ -1.67
GCD1	YOR260W	NUP82	P40368	713 aa		4.6	□□□□□ -1.67
GCD1	YOR260W	DJP1	P40564	432 aa		4.6	□□□□□ -1.67
GCD1	YOR260W	GYP8	P43570	497 aa		4.6	□□□□□ -1.67
GCD1	YOR260W	BUL1	P48524	976 aa		4.6	□□□□□ -1.67
GCD1	YOR260W	YGR021W	P53212	290 aa		4.6	□□□□□ -1.67
GCD1	YOR260W	VPS30	Q02948	557 aa		4.6	□□□□□ -1.67
GCD1	YOR260W	IRC3	Q06683	689 aa		4.6	□□□□□ -1.67
GCD1	YOR260W	PSR1	Q07800	427 aa		4.6	□□□□□ -1.67
GCD1	YOR260W	CDC45	Q08032	650 aa		4.6	□□□□□ -1.67
GCD1	YOR260W	AIM39	Q08223	395 aa		4.6	□□□□□ -1.67
GCD1	YOR260W	RKM3	P38222	552 aa		4.6	□□□□□ -1.67
GCD1	YOR260W	CHZ1	P40019	153 aa	Predicted RBP	4.6	□□□□□ -1.67
GCD1	YOR260W	VID27	P40157	782 aa		4.6	□□□□□ -1.67
GCD1	YOR260W	MAL11	P53048	616 aa		4.6	□□□□□ -1.67
GCD1	YOR260W	YNL058C	P53947	316 aa		4.6	□□□□□ -1.67
GCD1	YOR260W	HDA1	P53973	706 aa		4.6	□□□□□ -1.67
GCD1	YOR260W	FOB1	O13329	566 aa		4.59	□□□□□ -1.67
GCD1	YOR260W	RFA1	P22336	621 aa	Known RBP	4.59	□□□□□ -1.67
GCD1	YOR260W	CAD1	P24813	409 aa	Known RBP	4.59	□□□□□ -1.67
GCD1	YOR260W	GPI8	P49018	411 aa		4.59	□□□□□ -1.67
GCD1	YOR260W	SLU7	Q02775	382 aa	Known RBP	4.59	□□□□□ -1.67
GCD1	YOR260W	HIR3	P47171	1648 aa		4.59	□□□□□ -1.68
GCD1	YOR260W	URA1	P28272	314 aa	Predicted RBP	4.58	□□□□□ -1.68
GCD1	YOR260W	TYE7	P33122	291 aa	Predicted RBP	4.58	□□□□□ -1.68
GCD1	YOR260W	PAF1	P38351	445 aa		4.58	□□□□□ -1.68
GCD1	YOR260W	GDH3	P39708	457 aa		4.58	□□□□□ -1.68
GCD1	YOR260W	SDP1	P40479	209 aa		4.58	□□□□□ -1.68
GCD1	YOR260W	CEP3	P40969	608 aa		4.58	□□□□□ -1.68
GCD1	YOR260W	YKR011C	Q02209	353 aa		4.58	□□□□□ -1.68
GCD1	YOR260W	ATG16	Q03818	150 aa		4.58	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms