RNA–Protein interactions for RNA: YOR227W

HER1, Transcript of Protein of unknown function, yeastyeast

Gene HER1, Length 3,741 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HER1YOR227W RVS167P39743 482 aaKnown RBP2.2□□□□□ -2.06
HER1YOR227W LSM5P40089 93 aaKnown RBP2.2□□□□□ -2.06
HER1YOR227W GYP8P43570 497 aa2.2□□□□□ -2.06
HER1YOR227W TAF1P46677 1066 aa2.2□□□□□ -2.06
HER1YOR227W RAT1Q02792 1006 aaKnown RBP2.2□□□□□ -2.06
HER1YOR227W PHM6Q05637 104 aa2.2□□□□□ -2.06
HER1YOR227W Q0182Q9ZZW1 134 aa2.2□□□□□ -2.06
HER1YOR227W COQ4O13525 335 aa2.2□□□□□ -2.06
HER1YOR227W RGP1P16664 663 aa2.2□□□□□ -2.06
HER1YOR227W MSH3P25336 1018 aa2.2□□□□□ -2.06
HER1YOR227W GCD11P32481 527 aaKnown RBP2.2□□□□□ -2.06
HER1YOR227W UTR2P32623 467 aa2.2□□□□□ -2.06
HER1YOR227W SHM2P37291 469 aaKnown RBP2.2□□□□□ -2.06
HER1YOR227W EXO5P38289 585 aa2.2□□□□□ -2.06
HER1YOR227W DPH1P40487 425 aaKnown RBP2.2□□□□□ -2.06
HER1YOR227W MPH1P40562 993 aa2.2□□□□□ -2.06
HER1YOR227W RET2P43621 546 aa2.2□□□□□ -2.06
HER1YOR227W TAD1P53065 400 aa2.2□□□□□ -2.06
HER1YOR227W ARE2P53629 642 aaKnown RBP2.2□□□□□ -2.06
HER1YOR227W GTR1Q00582 310 aa2.2□□□□□ -2.06
HER1YOR227W PDS5Q04264 1277 aa2.2□□□□□ -2.06
HER1YOR227W RVB2Q12464 471 aaKnown RBP2.2□□□□□ -2.06
HER1YOR227W INO1P11986 533 aa2.19□□□□□ -2.06
HER1YOR227W AAC3P18238 307 aa2.19□□□□□ -2.06
HER1YOR227W GFD2P25370 566 aaKnown RBP2.19□□□□□ -2.06
HER1YOR227W AAD3P25612 363 aa2.19□□□□□ -2.06
HER1YOR227W CHS3P29465 1165 aa2.19□□□□□ -2.06
HER1YOR227W AFG2P32794 780 aa2.19□□□□□ -2.06
HER1YOR227W MCD4P36051 919 aa2.19□□□□□ -2.06
HER1YOR227W PET10P36139 283 aa2.19□□□□□ -2.06
HER1YOR227W LDH1P38139 375 aa2.19□□□□□ -2.06
HER1YOR227W CKB2P38930 258 aa2.19□□□□□ -2.06
HER1YOR227W SIT1P39980 628 aa2.19□□□□□ -2.06
HER1YOR227W IRC6P43615 237 aa2.19□□□□□ -2.06
HER1YOR227W SUM1P46676 1062 aa2.19□□□□□ -2.06
HER1YOR227W BFA1P47113 574 aa2.19□□□□□ -2.06
HER1YOR227W TIM10P87108 93 aa2.19□□□□□ -2.06
HER1YOR227W TDA9Q04545 1251 aa2.19□□□□□ -2.06
HER1YOR227W WTM2Q12206 467 aa2.19□□□□□ -2.06
HER1YOR227W DPH6Q12429 685 aa2.19□□□□□ -2.06
HER1YOR227W RPS19AP07280 144 aaKnown RBP2.19□□□□□ -2.06
HER1YOR227W RPS19BP07281 144 aaPredicted RBP2.19□□□□□ -2.06
HER1YOR227W HSF1P10961 833 aa2.19□□□□□ -2.06
HER1YOR227W AEP2P22136 580 aa2.19□□□□□ -2.06
HER1YOR227W RAD16P31244 790 aa2.19□□□□□ -2.06
HER1YOR227W VMA8P32610 256 aaKnown RBP2.19□□□□□ -2.06
HER1YOR227W EAP1P36041 632 aaKnown RBP2.19□□□□□ -2.06
HER1YOR227W BIT2P38346 545 aa2.19□□□□□ -2.06
HER1YOR227W LTP1P40347 161 aa2.19□□□□□ -2.06
HER1YOR227W GZF3P42944 551 aaKnown RBP2.19□□□□□ -2.06
HER1YOR227W CAF16P43569 289 aa2.19□□□□□ -2.06
HER1YOR227W YGL176CP46945 554 aa2.19□□□□□ -2.06
HER1YOR227W HXT16P47185 567 aa2.19□□□□□ -2.06
HER1YOR227W TIM11P81449 96 aaPredicted RBP2.19□□□□□ -2.06
HER1YOR227W SPP1Q03012 353 aa2.19□□□□□ -2.06
HER1YOR227W NSE5Q03718 556 aa2.19□□□□□ -2.06
HER1YOR227W YLR352WQ06479 807 aa2.19□□□□□ -2.06
HER1YOR227W ATG33Q06485 197 aa2.19□□□□□ -2.06
HER1YOR227W RSC58Q07979 502 aa2.19□□□□□ -2.06
HER1YOR227W TY1A-LR4P0C2I8 440 aaKnown RBP2.19□□□□□ -2.06
HER1YOR227W TY1A-DR6P0CX70 440 aa2.19□□□□□ -2.06
HER1YOR227W TY1A-ER1P0CX71 440 aa2.19□□□□□ -2.06
HER1YOR227W TY1A-LR2P0CX72 440 aa2.19□□□□□ -2.06
HER1YOR227W TY1A-PLP0CX73 440 aa2.19□□□□□ -2.06
HER1YOR227W TY1A-JR1P0CX74 440 aa2.19□□□□□ -2.06
HER1YOR227W TY1A-LR3P0CX75 440 aa2.19□□□□□ -2.06
HER1YOR227W TY1A-ML2P0CX76 440 aa2.19□□□□□ -2.06
HER1YOR227W RAD18P10862 487 aa2.19□□□□□ -2.06
HER1YOR227W CBP3P21560 335 aa2.19□□□□□ -2.06
HER1YOR227W DBP2P24783 546 aaKnown RBP2.19□□□□□ -2.06
HER1YOR227W BRF1P29056 596 aa2.19□□□□□ -2.06
HER1YOR227W VPH1P32563 840 aaKnown RBP2.19□□□□□ -2.06
HER1YOR227W SMY2P32909 740 aaKnown RBP2.19□□□□□ -2.06
HER1YOR227W SSN3P39073 555 aa2.19□□□□□ -2.06
HER1YOR227W DSS1P39112 969 aa2.19□□□□□ -2.06
HER1YOR227W SPC72P39723 622 aa2.19□□□□□ -2.06
HER1YOR227W DOT6P40059 670 aaKnown RBP2.19□□□□□ -2.06
HER1YOR227W RIC1P40395 1056 aa2.19□□□□□ -2.06
HER1YOR227W RRN7P40992 514 aa2.19□□□□□ -2.06
HER1YOR227W VNX1P42839 908 aa2.19□□□□□ -2.06
HER1YOR227W GUS1P46655 708 aaKnown RBP RIP-Chip data2.19□□□□□ -2.06not detected
HER1YOR227W PUS4P48567 403 aaKnown RBP2.19□□□□□ -2.06
HER1YOR227W YDR131CQ03899 556 aa2.19□□□□□ -2.06
HER1YOR227W YLR345WQ06137 509 aa2.19□□□□□ -2.06
HER1YOR227W SPP382Q06411 708 aaPredicted RBP2.19□□□□□ -2.06
HER1YOR227W AOS1Q06624 347 aa2.19□□□□□ -2.06
HER1YOR227W TY1A-GR1Q12085 440 aa2.19□□□□□ -2.06
HER1YOR227W YOL114CQ12322 202 aa2.19□□□□□ -2.06
HER1YOR227W TY1A-DR3Q12441 440 aa2.19□□□□□ -2.06
HER1YOR227W TY1A-PR3Q6Q5H1 440 aaKnown RBP2.19□□□□□ -2.06
HER1YOR227W TY1A-OLQ92392 440 aaKnown RBP2.19□□□□□ -2.06
HER1YOR227W KAR2P16474 682 aaKnown RBP2.18□□□□□ -2.06
HER1YOR227W NCP1P16603 691 aaKnown RBP2.18□□□□□ -2.06
HER1YOR227W MSM1P22438 575 aa2.18□□□□□ -2.06
HER1YOR227W NPP1P25353 742 aa2.18□□□□□ -2.06
HER1YOR227W YEL1P34225 687 aa2.18□□□□□ -2.06
HER1YOR227W FAT1P38225 669 aa2.18□□□□□ -2.06
HER1YOR227W CAJ1P39101 391 aa2.18□□□□□ -2.06
HER1YOR227W YIL165CP40446 119 aa2.18□□□□□ -2.06
HER1YOR227W IMA5P40884 581 aa2.18□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 60.3 ms