RNA–Protein interactions for RNA: YNL293W

MSB3, Transcript of Rab GTPase-activating protein, yeast

Gene MSB3, Length 1,902 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSB3	YNL293W	KAP114	P53067	1004 aa		7.5	□□□□□ -1.21
MSB3	YNL293W	LIF1	P53150	421 aa		7.5	□□□□□ -1.21
MSB3	YNL293W	RBG2	P53295	368 aa	Known RBP	7.5	□□□□□ -1.21
MSB3	YNL293W	VPS75	P53853	264 aa		7.5	□□□□□ -1.21
MSB3	YNL293W	ALF1	P53904	254 aa		7.5	□□□□□ -1.21
MSB3	YNL293W	HEF3	P53978	1044 aa	Known RBP	7.5	□□□□□ -1.21
MSB3	YNL293W	INA17	Q02888	182 aa		7.5	□□□□□ -1.21
MSB3	YNL293W	VPS16	Q03308	798 aa		7.5	□□□□□ -1.21
MSB3	YNL293W	CWC21	Q03375	135 aa	Known RBP	7.5	□□□□□ -1.21
MSB3	YNL293W	HFD1	Q04458	532 aa		7.5	□□□□□ -1.21
MSB3	YNL293W	SSF2	Q12153	453 aa	Predicted RBP	7.5	□□□□□ -1.21
MSB3	YNL293W	RPB2	P08518	1224 aa	Known RBP	7.5	□□□□□ -1.21
MSB3	YNL293W	SUP45	P12385	437 aa	Known RBP	7.5	□□□□□ -1.21
MSB3	YNL293W	SNA3	P14359	133 aa		7.5	□□□□□ -1.21
MSB3	YNL293W	VMA2	P16140	517 aa	Known RBP	7.5	□□□□□ -1.21
MSB3	YNL293W	CKI1	P20485	582 aa		7.5	□□□□□ -1.21
MSB3	YNL293W	ADY2	P25613	283 aa		7.5	□□□□□ -1.21
MSB3	YNL293W	CSE4	P36012	229 aa		7.5	□□□□□ -1.21
MSB3	YNL293W	SDH8	P38345	138 aa		7.5	□□□□□ -1.21
MSB3	YNL293W	TIF5	P38431	405 aa	Known RBP	7.5	□□□□□ -1.21
MSB3	YNL293W	RRF1	P38771	230 aa		7.5	□□□□□ -1.21
MSB3	YNL293W	PCI8	P40512	444 aa		7.5	□□□□□ -1.21
MSB3	YNL293W	XKS1	P42826	600 aa		7.5	□□□□□ -1.21
MSB3	YNL293W	BRE2	P43132	505 aa		7.5	□□□□□ -1.21
MSB3	YNL293W	MIG2	P53035	382 aa		7.5	□□□□□ -1.21
MSB3	YNL293W	RRP46	P53256	223 aa	Predicted RBP	7.5	□□□□□ -1.21
MSB3	YNL293W	BOP3	P53958	396 aa		7.5	□□□□□ -1.21
MSB3	YNL293W	SLT2	Q00772	484 aa		7.5	□□□□□ -1.21
MSB3	YNL293W	MEC3	Q02574	474 aa		7.5	□□□□□ -1.21
MSB3	YNL293W	DXO1	Q06349	442 aa		7.5	□□□□□ -1.21
MSB3	YNL293W	THI22	Q06490	572 aa		7.5	□□□□□ -1.21
MSB3	YNL293W	ISA1	Q07821	250 aa	Predicted RBP	7.5	□□□□□ -1.21
MSB3	YNL293W	RPO41	P13433	1351 aa	Known RBP	7.49	□□□□□ -1.21
MSB3	YNL293W	PRI1	P10363	409 aa		7.49	□□□□□ -1.21
MSB3	YNL293W	RED1	P14291	827 aa		7.49	□□□□□ -1.21
MSB3	YNL293W	DBF2	P22204	572 aa		7.49	□□□□□ -1.21
MSB3	YNL293W	SIN4	P32259	974 aa		7.49	□□□□□ -1.21
MSB3	YNL293W	GYP6	P32806	458 aa		7.49	□□□□□ -1.21
MSB3	YNL293W	RPT1	P33299	467 aa	Known RBP	7.49	□□□□□ -1.21
MSB3	YNL293W	TOM20	P35180	183 aa		7.49	□□□□□ -1.21
MSB3	YNL293W	MRPL17	P36528	281 aa		7.49	□□□□□ -1.21
MSB3	YNL293W	DLD3	P39976	496 aa	Known RBP	7.49	□□□□□ -1.21
MSB3	YNL293W	YJR039W	P47107	1121 aa		7.49	□□□□□ -1.21
MSB3	YNL293W	IMD3	P50095	523 aa	Known RBP	7.49	□□□□□ -1.21
MSB3	YNL293W	PTA1	Q01329	785 aa	Predicted RBP	7.49	□□□□□ -1.21
MSB3	YNL293W	MMT1	Q03218	510 aa		7.49	□□□□□ -1.21
MSB3	YNL293W	MTC5	Q03897	1148 aa		7.49	□□□□□ -1.21
MSB3	YNL293W	YDR179W-A	Q03983	463 aa		7.49	□□□□□ -1.21
MSB3	YNL293W	SMC5	Q08204	1093 aa		7.49	□□□□□ -1.21
MSB3	YNL293W	ALR1	Q08269	859 aa		7.49	□□□□□ -1.21
MSB3	YNL293W	COQ4	O13525	335 aa		7.48	□□□□□ -1.21
MSB3	YNL293W	CMD1	P06787	147 aa	Known RBP	7.48	□□□□□ -1.21
MSB3	YNL293W	GPA2	P10823	449 aa		7.48	□□□□□ -1.21
MSB3	YNL293W	REC107	P21651	314 aa		7.48	□□□□□ -1.21
MSB3	YNL293W	KIN3	P22209	435 aa		7.48	□□□□□ -1.21
MSB3	YNL293W	MEF1	P25039	761 aa		7.48	□□□□□ -1.21
MSB3	YNL293W	SCT1	P32784	759 aa		7.48	□□□□□ -1.21
MSB3	YNL293W	CPR5	P35176	225 aa		7.48	□□□□□ -1.21
MSB3	YNL293W	BAP2	P38084	609 aa		7.48	□□□□□ -1.21
MSB3	YNL293W	AST2	P39945	430 aa	Known RBP	7.48	□□□□□ -1.21
MSB3	YNL293W	RPH1	P39956	796 aa		7.48	□□□□□ -1.21
MSB3	YNL293W	YER130C	P39959	443 aa		7.48	□□□□□ -1.21
MSB3	YNL293W	FMP10	P40098	244 aa		7.48	□□□□□ -1.21
MSB3	YNL293W	LYS4	P49367	693 aa	Predicted RBP	7.48	□□□□□ -1.21
MSB3	YNL293W	YGR054W	P53235	642 aa	Known RBP	7.48	□□□□□ -1.21
MSB3	YNL293W	PEF1	P53238	335 aa		7.48	□□□□□ -1.21
MSB3	YNL293W	USA1	Q03714	838 aa		7.48	□□□□□ -1.21
MSB3	YNL293W	YLR287C	Q05881	355 aa		7.48	□□□□□ -1.21
MSB3	YNL293W	RGC1	Q06108	1083 aa	Known RBP	7.48	□□□□□ -1.21
MSB3	YNL293W	YCS4	Q06156	1176 aa		7.48	□□□□□ -1.21
MSB3	YNL293W	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	7.48	□□□□□ -1.21	not detected
MSB3	YNL293W	MLH2	Q07980	695 aa		7.48	□□□□□ -1.21
MSB3	YNL293W	TIP41	Q12199	356 aa		7.48	□□□□□ -1.21
MSB3	YNL293W	PDR12	Q02785	1511 aa		7.48	□□□□□ -1.21
MSB3	YNL293W	ALG1	P16661	449 aa		7.48	□□□□□ -1.21
MSB3	YNL293W	DBP3	P20447	523 aa	Known RBP	7.48	□□□□□ -1.21
MSB3	YNL293W	MSB1	P21339	1137 aa	Known RBP	7.48	□□□□□ -1.21
MSB3	YNL293W	GSY2	P27472	705 aa		7.48	□□□□□ -1.21
MSB3	YNL293W	OXP1	P28273	1286 aa		7.48	□□□□□ -1.21
MSB3	YNL293W	RTG2	P32608	588 aa	Known RBP	7.48	□□□□□ -1.21
MSB3	YNL293W	SQT1	P35184	431 aa		7.48	□□□□□ -1.21
MSB3	YNL293W	MAL33	P38157	468 aa		7.48	□□□□□ -1.21
MSB3	YNL293W	GIP1	P38229	639 aa		7.48	□□□□□ -1.21
MSB3	YNL293W	CCC2	P38995	1004 aa		7.48	□□□□□ -1.21
MSB3	YNL293W	JLP2	P40206	208 aa		7.48	□□□□□ -1.21
MSB3	YNL293W	PDS1	P40316	373 aa	Predicted RBP	7.48	□□□□□ -1.21
MSB3	YNL293W	LYS14	P40971	790 aa		7.48	□□□□□ -1.21
MSB3	YNL293W	SBE2	P42223	864 aa	Known RBP	7.48	□□□□□ -1.21
MSB3	YNL293W	FCP1	Q03254	732 aa		7.48	□□□□□ -1.21
MSB3	YNL293W	VPS64	Q03944	604 aa		7.48	□□□□□ -1.21
MSB3	YNL293W	ADE13	Q05911	482 aa	Known RBP	7.48	□□□□□ -1.21
MSB3	YNL293W	RIB2	Q12362	591 aa	Known RBP	7.48	□□□□□ -1.21
MSB3	YNL293W	RMP1	Q12530	201 aa		7.48	□□□□□ -1.21
MSB3	YNL293W	LPD1	P09624	499 aa	Known RBP	7.47	□□□□□ -1.21
MSB3	YNL293W	EUG1	P32474	517 aa		7.47	□□□□□ -1.21
MSB3	YNL293W	SRP40	P32583	406 aa	Predicted RBP	7.47	□□□□□ -1.21
MSB3	YNL293W	ANP1	P32629	500 aa		7.47	□□□□□ -1.21
MSB3	YNL293W	CCL1	P37366	393 aa		7.47	□□□□□ -1.21
MSB3	YNL293W	YBL028C	P38202	106 aa		7.47	□□□□□ -1.21
MSB3	YNL293W	SWC5	P38326	303 aa		7.47	□□□□□ -1.21

Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms