RNA–Protein interactions for RNA: YMR298W

LIP1, Transcript of Ceramide synthase subunit, yeastyeast

Gene LIP1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LIP1YMR298W RAD54P32863 898 aa10.23□□□□□ -0.77
LIP1YMR298W TIM23P32897 222 aa10.23□□□□□ -0.77
LIP1YMR298W LTV1P34078 463 aa10.23□□□□□ -0.77
LIP1YMR298W BYE1P36106 594 aa10.23□□□□□ -0.77
LIP1YMR298W SET5P38890 526 aaKnown RBP10.23□□□□□ -0.77
LIP1YMR298W NPP2P39997 493 aa10.23□□□□□ -0.77
LIP1YMR298W RPS7BP48164 190 aaKnown RBP10.23□□□□□ -0.77
LIP1YMR298W SHE10P53075 577 aa10.23□□□□□ -0.77
LIP1YMR298W YGR021WP53212 290 aa10.23□□□□□ -0.77
LIP1YMR298W ENV11P53246 860 aa10.23□□□□□ -0.77
LIP1YMR298W UBP3Q01477 912 aaKnown RBP RIP-Chip data10.23□□□□□ -0.77not detected
LIP1YMR298W YLR001CQ07895 862 aa10.23□□□□□ -0.77
LIP1YMR298W SNF1P06782 633 aaKnown RBP10.22□□□□□ -0.77
LIP1YMR298W YUR1P26725 428 aa10.22□□□□□ -0.77
LIP1YMR298W PIN4P34217 668 aaKnown RBP RIP-Chip data10.22□□□□□ -0.77not detected
LIP1YMR298W SMF1P38925 575 aa10.22□□□□□ -0.77
LIP1YMR298W MXR1P40029 184 aa10.22□□□□□ -0.77
LIP1YMR298W SGM1P47166 707 aa10.22□□□□□ -0.77
LIP1YMR298W PSP2P50109 593 aaKnown RBP10.22□□□□□ -0.77
LIP1YMR298W ATG1P53104 897 aa10.22□□□□□ -0.77
LIP1YMR298W BTN2P53286 410 aa10.22□□□□□ -0.77
LIP1YMR298W YNL146WP53906 100 aa10.22□□□□□ -0.77
LIP1YMR298W SYH1Q02875 849 aaKnown RBP10.22□□□□□ -0.77
LIP1YMR298W YDL206WQ12424 762 aa10.22□□□□□ -0.77
LIP1YMR298W OSH2Q12451 1283 aa10.22□□□□□ -0.77
LIP1YMR298W DPH2P32461 534 aa10.21□□□□□ -0.77
LIP1YMR298W MOT2P34909 587 aaKnown RBP10.21□□□□□ -0.77
LIP1YMR298W KIC1P38692 1080 aa10.21□□□□□ -0.77
LIP1YMR298W UTP14Q04500 899 aaKnown RBP10.21□□□□□ -0.77
LIP1YMR298W YML082WQ04533 649 aaKnown RBP10.21□□□□□ -0.77
LIP1YMR298W POB3Q04636 552 aaKnown RBP10.21□□□□□ -0.77
LIP1YMR298W SIL1Q08199 421 aa10.21□□□□□ -0.77
LIP1YMR298W MET7Q08645 548 aa10.21□□□□□ -0.77
LIP1YMR298W SLX4Q12098 748 aa10.21□□□□□ -0.77
LIP1YMR298W CCT4P39078 528 aaKnown RBP10.2□□□□□ -0.78
LIP1YMR298W HSH155P49955 971 aaKnown RBP10.2□□□□□ -0.78
LIP1YMR298W CUL3P53202 744 aa10.2□□□□□ -0.78
LIP1YMR298W RRB1Q04225 511 aaKnown RBP10.2□□□□□ -0.78
LIP1YMR298W HIF1Q12373 385 aa10.2□□□□□ -0.78
LIP1YMR298W YDR461C-AQ2V2P7 80 aa10.2□□□□□ -0.78
LIP1YMR298W RPO26P20435 155 aa10.19□□□□□ -0.78
LIP1YMR298W PRE10P21242 288 aaKnown RBP RIP-Chip data10.19□□□□□ -0.78not detected
LIP1YMR298W KIN82P25341 720 aa10.19□□□□□ -0.78
LIP1YMR298W SEC21P32074 935 aaKnown RBP10.19□□□□□ -0.78
LIP1YMR298W CNS1P33313 385 aa10.19□□□□□ -0.78
LIP1YMR298W GUA1P38625 525 aaKnown RBP10.19□□□□□ -0.78
LIP1YMR298W MAD1P40957 749 aa10.19□□□□□ -0.78
LIP1YMR298W KAP114P53067 1004 aa10.19□□□□□ -0.78
LIP1YMR298W RPA49Q01080 415 aaPredicted RBP10.19□□□□□ -0.78
LIP1YMR298W YMR018WQ04364 514 aa10.19□□□□□ -0.78
LIP1YMR298W YMR114CQ04471 368 aaKnown RBP10.19□□□□□ -0.78
LIP1YMR298W ATG23Q06671 453 aa10.19□□□□□ -0.78
LIP1YMR298W HFI1Q12060 488 aa10.19□□□□□ -0.78
LIP1YMR298W CDC33P07260 213 aaKnown RBP10.18□□□□□ -0.78
LIP1YMR298W ERG11P10614 530 aa10.18□□□□□ -0.78
LIP1YMR298W POX1P13711 748 aa10.18□□□□□ -0.78
LIP1YMR298W SWI3P32591 825 aa10.18□□□□□ -0.78
LIP1YMR298W BLI1P35727 113 aa10.18□□□□□ -0.78
LIP1YMR298W YKL050CP35736 922 aa10.18□□□□□ -0.78
LIP1YMR298W CAB3P36076 571 aa10.18□□□□□ -0.78
LIP1YMR298W TRZ1P36159 838 aaPredicted RBP10.18□□□□□ -0.78
LIP1YMR298W FTR1P40088 404 aa10.18□□□□□ -0.78
LIP1YMR298W PSY2P40164 858 aa10.18□□□□□ -0.78
LIP1YMR298W SCD6P45978 349 aaKnown RBP RIP-Chip data10.18□□□□□ -0.78not detected
LIP1YMR298W JJJ3P47138 172 aa10.18□□□□□ -0.78
LIP1YMR298W ASN1P49089 572 aaKnown RBP10.18□□□□□ -0.78
LIP1YMR298W ORC5P50874 479 aa10.18□□□□□ -0.78
LIP1YMR298W CWC22P53333 577 aaKnown RBP10.18□□□□□ -0.78
LIP1YMR298W YDR090CQ03193 310 aa10.18□□□□□ -0.78
LIP1YMR298W YLR225CQ05948 407 aaKnown RBP10.18□□□□□ -0.78
LIP1YMR298W ECM7Q06200 448 aa10.18□□□□□ -0.78
LIP1YMR298W NAT1P12945 854 aaKnown RBP10.17□□□□□ -0.78
LIP1YMR298W GFA1P14742 717 aaKnown RBP10.17□□□□□ -0.78
LIP1YMR298W PAP1P29468 568 aaKnown RBP10.17□□□□□ -0.78
LIP1YMR298W SMY2P32909 740 aaKnown RBP10.17□□□□□ -0.78
LIP1YMR298W ACF4P47129 309 aa10.17□□□□□ -0.78
LIP1YMR298W VPS70P47161 811 aa10.17□□□□□ -0.78
LIP1YMR298W ARH1P48360 493 aa10.17□□□□□ -0.78
LIP1YMR298W SCS3P53012 380 aa10.17□□□□□ -0.78
LIP1YMR298W JJJ1P53863 590 aa10.17□□□□□ -0.78
LIP1YMR298W YML020WQ03722 664 aa10.17□□□□□ -0.78
LIP1YMR298W RGA2Q06407 1009 aa10.17□□□□□ -0.78
LIP1YMR298W IWR1Q07532 353 aaPredicted RBP10.17□□□□□ -0.78
LIP1YMR298W MAS2P11914 482 aa10.16□□□□□ -0.78
LIP1YMR298W UBP14P38237 781 aaKnown RBP10.16□□□□□ -0.78
LIP1YMR298W VID24P38263 362 aa10.16□□□□□ -0.78
LIP1YMR298W EXO5P38289 585 aa10.16□□□□□ -0.78
LIP1YMR298W CPR7P47103 393 aa10.16□□□□□ -0.78
LIP1YMR298W CLA4P48562 842 aa10.16□□□□□ -0.78
LIP1YMR298W TBF1Q02457 562 aa10.16□□□□□ -0.78
LIP1YMR298W GIS3Q12418 502 aa10.16□□□□□ -0.78
LIP1YMR298W TIF6Q12522 245 aaKnown RBP10.16□□□□□ -0.78
LIP1YMR298W ECM29P38737 1868 aa10.15□□□□□ -0.78
LIP1YMR298W TMT1P32643 299 aa10.15□□□□□ -0.78
LIP1YMR298W NFU1P32860 256 aa10.15□□□□□ -0.78
LIP1YMR298W SKG6P32900 734 aaPredicted RBP10.15□□□□□ -0.78
LIP1YMR298W CSG2P35206 410 aa10.15□□□□□ -0.78
LIP1YMR298W GPT2P36148 743 aa10.15□□□□□ -0.78
LIP1YMR298W FLR1P38124 548 aa10.15□□□□□ -0.78
LIP1YMR298W MMS4P38257 691 aa10.15□□□□□ -0.78
Retrieved 100 of 5,963 RNA–protein pairs in 8.2 ms