RNA–Protein interactions for RNA: YMR128W

ECM16, Transcript of Essential DEAH-box ATP-dependent RNA helicase specific to U3 snoRNP, yeastyeast

Gene ECM16, Length 3,804 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM16YMR128W YFL034WP43564 1073 aa4.1□□□□□ -1.75
ECM16YMR128W GDE1Q02979 1223 aa4.1□□□□□ -1.75
ECM16YMR128W SAS4Q04003 481 aa4.1□□□□□ -1.75
ECM16YMR128W OSW1Q08692 278 aa4.1□□□□□ -1.75
ECM16YMR128W SEC39Q12745 709 aa4.1□□□□□ -1.75
ECM16YMR128W RAS1P01119 309 aa4.09□□□□□ -1.75
ECM16YMR128W NAM7P30771 971 aaKnown RBP4.09□□□□□ -1.75
ECM16YMR128W LOS1P33418 1100 aaPredicted RBP4.09□□□□□ -1.75
ECM16YMR128W VID27P40157 782 aa4.09□□□□□ -1.75
ECM16YMR128W CIT3P43635 486 aa4.09□□□□□ -1.75
ECM16YMR128W TFB2Q02939 513 aa4.09□□□□□ -1.75
ECM16YMR128W YDR341CQ05506 607 aaKnown RBP4.09□□□□□ -1.75
ECM16YMR128W RLP24Q07915 199 aaKnown RBP4.09□□□□□ -1.75
ECM16YMR128W SCP160P06105 1222 aaKnown RBP RIP-Chip data4.09□□□□□ -1.75 RIP-Chip
ECM16YMR128W SEC14P24280 304 aaKnown RBP4.09□□□□□ -1.75
ECM16YMR128W LCB1P25045 558 aaKnown RBP4.09□□□□□ -1.75
ECM16YMR128W RDH54P38086 958 aa4.09□□□□□ -1.75
ECM16YMR128W AMN1P38285 549 aaPredicted RBP4.09□□□□□ -1.75
ECM16YMR128W SMX2P40204 77 aaKnown RBP4.09□□□□□ -1.75
ECM16YMR128W NTA1P40354 457 aa4.09□□□□□ -1.75
ECM16YMR128W SEC26P41810 973 aaKnown RBP4.09□□□□□ -1.75
ECM16YMR128W ENP2P48234 707 aaKnown RBP4.09□□□□□ -1.75
ECM16YMR128W MAL11P53048 616 aa4.09□□□□□ -1.75
ECM16YMR128W BTN2P53286 410 aa4.09□□□□□ -1.75
ECM16YMR128W IRC4Q03036 179 aa4.09□□□□□ -1.75
ECM16YMR128W MRD1Q06106 887 aaKnown RBP4.09□□□□□ -1.75
ECM16YMR128W PRP4P20053 465 aaKnown RBP4.09□□□□□ -1.76
ECM16YMR128W UBP9P39967 754 aa4.09□□□□□ -1.76
ECM16YMR128W RIM8P53179 542 aa4.09□□□□□ -1.76
ECM16YMR128W UBX2Q04228 584 aa4.09□□□□□ -1.76
ECM16YMR128W SMD2Q06217 110 aaKnown RBP4.09□□□□□ -1.76
ECM16YMR128W UTP4Q06679 776 aaKnown RBP4.09□□□□□ -1.76
ECM16YMR128W BDF2Q07442 638 aa4.09□□□□□ -1.76
ECM16YMR128W ACM1Q08981 209 aa4.09□□□□□ -1.76
ECM16YMR128W GRX1P25373 110 aaKnown RBP4.08□□□□□ -1.76
ECM16YMR128W TRK2P28584 889 aa4.08□□□□□ -1.76
ECM16YMR128W YME2P32843 850 aa4.08□□□□□ -1.76
ECM16YMR128W NFU1P32860 256 aa4.08□□□□□ -1.76
ECM16YMR128W SPP381P38282 291 aaPredicted RBP4.08□□□□□ -1.76
ECM16YMR128W TOS3P43637 560 aa4.08□□□□□ -1.76
ECM16YMR128W SKP1P52286 194 aa4.08□□□□□ -1.76
ECM16YMR128W NCE103P53615 221 aa4.08□□□□□ -1.76
ECM16YMR128W FIG2P25653 1609 aa4.08□□□□□ -1.76
ECM16YMR128W ARG82P07250 355 aa4.08□□□□□ -1.76
ECM16YMR128W YMR085WP0CF18 432 aa4.08□□□□□ -1.76
ECM16YMR128W YEL076C-AP0CX16 216 aa4.08□□□□□ -1.76
ECM16YMR128W YLR464WP0CX17 216 aa4.08□□□□□ -1.76
ECM16YMR128W KAR3P17119 729 aa4.08□□□□□ -1.76
ECM16YMR128W BAS1P22035 811 aa4.08□□□□□ -1.76
ECM16YMR128W YEL076CP39971 216 aa4.08□□□□□ -1.76
ECM16YMR128W ICP55P40051 511 aa4.08□□□□□ -1.76
ECM16YMR128W UTP7P40055 554 aaKnown RBP4.08□□□□□ -1.76
ECM16YMR128W URB2P47108 1174 aa4.08□□□□□ -1.76
ECM16YMR128W HUL5P53119 910 aa4.08□□□□□ -1.76
ECM16YMR128W SDA1P53313 767 aaKnown RBP4.08□□□□□ -1.76
ECM16YMR128W YNR040WP53736 256 aa4.08□□□□□ -1.76
ECM16YMR128W NCS2P53923 493 aaPredicted RBP4.08□□□□□ -1.76
ECM16YMR128W CUS1Q02554 436 aaPredicted RBP4.08□□□□□ -1.76
ECM16YMR128W YDL057WQ07379 328 aa4.08□□□□□ -1.76
ECM16YMR128W ASF1P32447 279 aa4.08□□□□□ -1.76
ECM16YMR128W VPS35P34110 944 aa4.08□□□□□ -1.76
ECM16YMR128W THI6P41835 540 aa4.08□□□□□ -1.76
ECM16YMR128W RPT4P53549 437 aaKnown RBP4.08□□□□□ -1.76
ECM16YMR128W LCB5Q06147 687 aaKnown RBP4.08□□□□□ -1.76
ECM16YMR128W CIT1P00890 479 aa4.07□□□□□ -1.76
ECM16YMR128W FLP1P03870 423 aa4.07□□□□□ -1.76
ECM16YMR128W OM45P16547 393 aa4.07□□□□□ -1.76
ECM16YMR128W APL1P27351 700 aa4.07□□□□□ -1.76
ECM16YMR128W GCD6P32501 712 aaKnown RBP4.07□□□□□ -1.76
ECM16YMR128W SWI3P32591 825 aa4.07□□□□□ -1.76
ECM16YMR128W PEX2P32800 271 aa4.07□□□□□ -1.76
ECM16YMR128W MDL2P33311 773 aa4.07□□□□□ -1.76
ECM16YMR128W JNM1P36224 373 aa4.07□□□□□ -1.76
ECM16YMR128W RIM11P38615 370 aa4.07□□□□□ -1.76
ECM16YMR128W MSC7P38694 644 aa4.07□□□□□ -1.76
ECM16YMR128W ASE1P50275 885 aa4.07□□□□□ -1.76
ECM16YMR128W SLK19Q08581 821 aaKnown RBP4.07□□□□□ -1.76
ECM16YMR128W DAS2Q12084 232 aa4.07□□□□□ -1.76
ECM16YMR128W TIP41Q12199 356 aa4.07□□□□□ -1.76
ECM16YMR128W MRP10O75012 95 aa4.07□□□□□ -1.76
ECM16YMR128W DPH5P32469 300 aaPredicted RBP4.07□□□□□ -1.76
ECM16YMR128W SMC1P32908 1225 aa4.07□□□□□ -1.76
ECM16YMR128W PBP2P38151 413 aaKnown RBP RIP-Chip data4.07□□□□□ -1.76not detected
ECM16YMR128W FZO1P38297 855 aa4.07□□□□□ -1.76
ECM16YMR128W YBP1P38315 674 aa4.07□□□□□ -1.76
ECM16YMR128W TDA3P38758 523 aa4.07□□□□□ -1.76
ECM16YMR128W HXT8P40886 569 aa4.07□□□□□ -1.76
ECM16YMR128W MAD1P40957 749 aa4.07□□□□□ -1.76
ECM16YMR128W VTC2P43585 828 aa4.07□□□□□ -1.76
ECM16YMR128W PFD1P46988 109 aa4.07□□□□□ -1.76
ECM16YMR128W TMA22P47089 198 aaPredicted RBP4.07□□□□□ -1.76
ECM16YMR128W GRX3Q03835 250 aa4.07□□□□□ -1.76
ECM16YMR128W REC8Q12188 680 aa4.07□□□□□ -1.76
ECM16YMR128W Q0182Q9ZZW1 134 aa4.07□□□□□ -1.76
ECM16YMR128W HKR1P41809 1802 aa4.07□□□□□ -1.76
ECM16YMR128W RAD3P06839 778 aa4.07□□□□□ -1.76
ECM16YMR128W CLN3P13365 580 aa4.07□□□□□ -1.76
ECM16YMR128W PPS1P38148 807 aa4.07□□□□□ -1.76
ECM16YMR128W OLA1P38219 394 aaKnown RBP4.07□□□□□ -1.76
ECM16YMR128W JJJ2P46997 583 aa4.07□□□□□ -1.76
Retrieved 100 of 5,963 RNA–protein pairs in 25.8 ms