RNA–Protein interactions for RNA: YML001W

YPT7, Transcript of Rab family GTPase, yeast

Gene YPT7, Length 627 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPT7	YML001W	HSF1	P10961	833 aa		4.5	□□□□□ -1.69
YPT7	YML001W	TRM2	P33753	639 aa		4.5	□□□□□ -1.69
YPT7	YML001W	MRP8	P35719	219 aa		4.5	□□□□□ -1.69
YPT7	YML001W	YKR078W	P36158	585 aa	Known RBP	4.5	□□□□□ -1.69
YPT7	YML001W	VAC8	P39968	578 aa		4.5	□□□□□ -1.69
YPT7	YML001W	SPF1	P39986	1215 aa	Known RBP	4.5	□□□□□ -1.69
YPT7	YML001W	URM1	P40554	99 aa	Predicted RBP	4.5	□□□□□ -1.69
YPT7	YML001W	SFB2	P53953	876 aa		4.5	□□□□□ -1.69
YPT7	YML001W	USO1	P25386	1790 aa		4.5	□□□□□ -1.69
YPT7	YML001W	PMI40	P29952	429 aa	Known RBP	4.49	□□□□□ -1.69
YPT7	YML001W	AFR1	P33304	620 aa		4.49	□□□□□ -1.69
YPT7	YML001W	YBR238C	P38330	731 aa	Known RBP	4.49	□□□□□ -1.69
YPT7	YML001W	TSL1	P38427	1098 aa	Known RBP	4.49	□□□□□ -1.69
YPT7	YML001W	YER158C	P40095	573 aa		4.49	□□□□□ -1.69
YPT7	YML001W	EXG2	P52911	562 aa		4.49	□□□□□ -1.69
YPT7	YML001W	PUS9	Q12069	462 aa		4.49	□□□□□ -1.69
YPT7	YML001W	KCS1	Q12494	1050 aa		4.49	□□□□□ -1.69
YPT7	YML001W	LEU2	P04173	364 aa	Predicted RBP	4.48	□□□□□ -1.69
YPT7	YML001W	RPS24A	P0CX31	135 aa	Known RBP	4.48	□□□□□ -1.69
YPT7	YML001W	RPS24B	P0CX32	135 aa	Known RBP	4.48	□□□□□ -1.69
YPT7	YML001W	NPP1	P25353	742 aa		4.48	□□□□□ -1.69
YPT7	YML001W	STE5	P32917	917 aa		4.48	□□□□□ -1.69
YPT7	YML001W	PBY1	P38254	753 aa		4.48	□□□□□ -1.69
YPT7	YML001W	CCC2	P38995	1004 aa		4.48	□□□□□ -1.69
YPT7	YML001W	SIT1	P39980	628 aa		4.48	□□□□□ -1.69
YPT7	YML001W	PHO23	P50947	330 aa		4.48	□□□□□ -1.69
YPT7	YML001W	YKE2	P52553	114 aa		4.48	□□□□□ -1.69
YPT7	YML001W	RRP46	P53256	223 aa	Predicted RBP	4.48	□□□□□ -1.69
YPT7	YML001W	EAF7	P53911	425 aa	Known RBP	4.48	□□□□□ -1.69
YPT7	YML001W	ATG19	P35193	415 aa		4.47	□□□□□ -1.69
YPT7	YML001W	IRR1	P40541	1150 aa		4.47	□□□□□ -1.69
YPT7	YML001W	MSE1	P48525	536 aa		4.47	□□□□□ -1.69
YPT7	YML001W	PSP2	P50109	593 aa	Known RBP	4.47	□□□□□ -1.69
YPT7	YML001W	NCS6	P53088	359 aa		4.47	□□□□□ -1.69
YPT7	YML001W	MAK10	Q02197	733 aa		4.47	□□□□□ -1.69
YPT7	YML001W	THI22	Q06490	572 aa		4.47	□□□□□ -1.69
YPT7	YML001W	YDR306C	Q06640	478 aa		4.47	□□□□□ -1.69
YPT7	YML001W	PSK1	P31374	1356 aa		4.47	□□□□□ -1.69
YPT7	YML001W	PRD1	P25375	712 aa		4.46	□□□□□ -1.7
YPT7	YML001W	DEF1	P35732	738 aa	Known RBP	4.46	□□□□□ -1.7
YPT7	YML001W	PFD1	P46988	109 aa		4.46	□□□□□ -1.7
YPT7	YML001W	SLI1	P53304	468 aa		4.46	□□□□□ -1.7
YPT7	YML001W	BUL2	Q03758	920 aa	Known RBP	4.46	□□□□□ -1.7
YPT7	YML001W	IOC4	Q04213	475 aa		4.46	□□□□□ -1.7
YPT7	YML001W	TDA5	Q06417	326 aa	Known RBP	4.46	□□□□□ -1.7
YPT7	YML001W	RTT109	Q07794	436 aa		4.46	□□□□□ -1.7
YPT7	YML001W	NPC2	Q12408	173 aa		4.46	□□□□□ -1.7
YPT7	YML001W	TY1B-NL2	Q99337	1749 aa	Known RBP	4.46	□□□□□ -1.7
YPT7	YML001W	TOP1	P04786	769 aa		4.45	□□□□□ -1.7
YPT7	YML001W	HBS1	P32769	611 aa	Known RBP	4.45	□□□□□ -1.7
YPT7	YML001W	AIM21	P40563	679 aa		4.45	□□□□□ -1.7
YPT7	YML001W	IOC3	P43596	787 aa		4.45	□□□□□ -1.7
YPT7	YML001W	SUN4	P53616	420 aa		4.45	□□□□□ -1.7
YPT7	YML001W	YNR029C	P53729	429 aa	Known RBP	4.45	□□□□□ -1.7
YPT7	YML001W	WHI4	Q07655	649 aa	Known RBP	4.45	□□□□□ -1.7
YPT7	YML001W	SSF2	Q12153	453 aa	Predicted RBP	4.45	□□□□□ -1.7
YPT7	YML001W	PNS1	Q12412	539 aa		4.45	□□□□□ -1.7
YPT7	YML001W	LAS17	Q12446	633 aa		4.45	□□□□□ -1.7
YPT7	YML001W	CDC48	P25694	835 aa	Known RBP	4.44	□□□□□ -1.7
YPT7	YML001W	CHS7	P38843	316 aa		4.44	□□□□□ -1.7
YPT7	YML001W	MSS4	P38994	779 aa		4.44	□□□□□ -1.7
YPT7	YML001W	YIL092W	P40497	633 aa		4.44	□□□□□ -1.7
YPT7	YML001W	RAI1	P53063	387 aa	Known RBP	4.44	□□□□□ -1.7
YPT7	YML001W	KIN4	Q01919	800 aa		4.44	□□□□□ -1.7
YPT7	YML001W	AUS1	Q08409	1394 aa		4.43	□□□□□ -1.7
YPT7	YML001W	AAR2	P32357	355 aa	Predicted RBP	4.43	□□□□□ -1.7
YPT7	YML001W	STE14	P32584	239 aa		4.43	□□□□□ -1.7
YPT7	YML001W	GRX4	P32642	244 aa		4.43	□□□□□ -1.7
YPT7	YML001W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.43	□□□□□ -1.7	not detected
YPT7	YML001W	TAP42	Q04372	366 aa		4.43	□□□□□ -1.7
YPT7	YML001W	YPR196W	Q06595	470 aa		4.43	□□□□□ -1.7
YPT7	YML001W	FMP25	Q08023	583 aa		4.43	□□□□□ -1.7
YPT7	YML001W	ENB1	Q08299	606 aa		4.43	□□□□□ -1.7
YPT7	YML001W	UPC2	Q12151	913 aa		4.43	□□□□□ -1.7
YPT7	YML001W	PRP9	P19736	530 aa	Known RBP	4.42	□□□□□ -1.7
YPT7	YML001W	ERT1	P38140	529 aa		4.42	□□□□□ -1.7
YPT7	YML001W	YBR184W	P38299	523 aa		4.42	□□□□□ -1.7
YPT7	YML001W	DJP1	P40564	432 aa		4.42	□□□□□ -1.7
YPT7	YML001W	BUL1	P48524	976 aa		4.42	□□□□□ -1.7
YPT7	YML001W	TPO2	P53283	614 aa		4.42	□□□□□ -1.7
YPT7	YML001W	HEF3	P53978	1044 aa	Known RBP	4.42	□□□□□ -1.7
YPT7	YML001W	GUP2	Q08929	609 aa		4.42	□□□□□ -1.7
YPT7	YML001W	HAP1	P0CE41	1502 aa		4.41	□□□□□ -1.7
YPT7	YML001W	ADE8	P04161	214 aa		4.41	□□□□□ -1.7
YPT7	YML001W	PFK1	P16861	987 aa	Known RBP	4.41	□□□□□ -1.7
YPT7	YML001W	KAR4	P25583	335 aa		4.41	□□□□□ -1.7
YPT7	YML001W	IME2	P32581	645 aa		4.41	□□□□□ -1.7
YPT7	YML001W	YRO2	P38079	344 aa		4.41	□□□□□ -1.7
YPT7	YML001W	AKL1	P38080	1108 aa	Known RBP	4.41	□□□□□ -1.7
YPT7	YML001W	RPO41	P13433	1351 aa	Known RBP	4.4	□□□□□ -1.7
YPT7	YML001W	NOT3	P06102	836 aa	Known RBP	4.4	□□□□□ -1.71
YPT7	YML001W	FBP1	P09201	348 aa		4.4	□□□□□ -1.71
YPT7	YML001W	CLC1	P17891	233 aa		4.4	□□□□□ -1.71
YPT7	YML001W	HSP104	P31539	908 aa	Known RBP	4.4	□□□□□ -1.71
YPT7	YML001W	STE13	P33894	931 aa		4.4	□□□□□ -1.71
YPT7	YML001W	TOK1	P40310	691 aa		4.4	□□□□□ -1.71
YPT7	YML001W	DSD1	P53095	428 aa		4.4	□□□□□ -1.71
YPT7	YML001W	UTP8	P53276	713 aa	Known RBP	4.4	□□□□□ -1.71
YPT7	YML001W	TY4B-H	P0C2J7	1802 aa		4.39	□□□□□ -1.71
YPT7	YML001W	TY4B-J	P47024	1803 aa		4.39	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 48.8 ms