RNA–Protein interactions for RNA: YLR277C

YSH1, Transcript of Putative endoribonuclease, yeast

Gene YSH1, Length 2,340 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YSH1	YLR277C	RPC53	P25441	422 aa		4.35	□□□□□ -1.71
YSH1	YLR277C	RPC19	P28000	142 aa	Known RBP	4.35	□□□□□ -1.71
YSH1	YLR277C	SEC21	P32074	935 aa	Known RBP	4.35	□□□□□ -1.71
YSH1	YLR277C	PPQ1	P32945	549 aa		4.35	□□□□□ -1.71
YSH1	YLR277C	YKL063C	P35725	167 aa		4.35	□□□□□ -1.71
YSH1	YLR277C	SRL3	P36167	246 aa		4.35	□□□□□ -1.71
YSH1	YLR277C	IFA38	P38286	347 aa		4.35	□□□□□ -1.71
YSH1	YLR277C	SWC5	P38326	303 aa		4.35	□□□□□ -1.71
YSH1	YLR277C	YHI9	P38765	294 aa		4.35	□□□□□ -1.71
YSH1	YLR277C	NUP60	P39705	539 aa		4.35	□□□□□ -1.71
YSH1	YLR277C	AIM10	P39965	576 aa	Known RBP	4.35	□□□□□ -1.71
YSH1	YLR277C	STB4	P50104	949 aa		4.35	□□□□□ -1.71
YSH1	YLR277C	COG2	P53271	262 aa		4.35	□□□□□ -1.71
YSH1	YLR277C	SFB2	P53953	876 aa		4.35	□□□□□ -1.71
YSH1	YLR277C	YPL109C	Q02981	657 aa		4.35	□□□□□ -1.71
YSH1	YLR277C	IVY1	Q04934	453 aa		4.35	□□□□□ -1.71
YSH1	YLR277C	RSA3	Q05942	220 aa	Known RBP	4.35	□□□□□ -1.71
YSH1	YLR277C	OPY2	Q06810	360 aa		4.35	□□□□□ -1.71
YSH1	YLR277C	YPR204W	Q08995	1032 aa		4.35	□□□□□ -1.71
YSH1	YLR277C	TRM8	Q12009	286 aa		4.35	□□□□□ -1.71
YSH1	YLR277C	MPD2	Q99316	277 aa		4.35	□□□□□ -1.71
YSH1	YLR277C	SPP41	P38904	1435 aa		4.35	□□□□□ -1.71
YSH1	YLR277C	KSS1	P14681	368 aa		4.35	□□□□□ -1.71
YSH1	YLR277C	RAD4	P14736	754 aa		4.35	□□□□□ -1.71
YSH1	YLR277C	ALG1	P16661	449 aa		4.35	□□□□□ -1.71
YSH1	YLR277C	SUI2	P20459	304 aa	Known RBP	4.35	□□□□□ -1.71
YSH1	YLR277C	SSO1	P32867	290 aa		4.35	□□□□□ -1.71
YSH1	YLR277C	YKL050C	P35736	922 aa		4.35	□□□□□ -1.71
YSH1	YLR277C	YKT6	P36015	200 aa	Known RBP	4.35	□□□□□ -1.71
YSH1	YLR277C	DYS1	P38791	387 aa		4.35	□□□□□ -1.71
YSH1	YLR277C	BDH2	P39713	417 aa		4.35	□□□□□ -1.71
YSH1	YLR277C	YIL092W	P40497	633 aa		4.35	□□□□□ -1.71
YSH1	YLR277C	AGE2	P40529	298 aa		4.35	□□□□□ -1.71
YSH1	YLR277C	CLA4	P48562	842 aa		4.35	□□□□□ -1.71
YSH1	YLR277C	ZIP2	P53061	704 aa		4.35	□□□□□ -1.71
YSH1	YLR277C	FYV6	P53913	173 aa		4.35	□□□□□ -1.71
YSH1	YLR277C	CWC15	Q03772	175 aa	Known RBP	4.35	□□□□□ -1.71
YSH1	YLR277C	MRX10	Q05648	414 aa		4.35	□□□□□ -1.71
YSH1	YLR277C	LCB5	Q06147	687 aa	Known RBP	4.35	□□□□□ -1.71
YSH1	YLR277C	REX3	Q12090	404 aa		4.35	□□□□□ -1.71
YSH1	YLR277C	SMC6	Q12749	1114 aa		4.35	□□□□□ -1.71
YSH1	YLR277C	PWP1	P21304	576 aa	Known RBP	4.34	□□□□□ -1.71
YSH1	YLR277C	SRP40	P32583	406 aa	Predicted RBP	4.34	□□□□□ -1.71
YSH1	YLR277C	VMA8	P32610	256 aa	Known RBP	4.34	□□□□□ -1.71
YSH1	YLR277C	CNS1	P33313	385 aa		4.34	□□□□□ -1.71
YSH1	YLR277C	CUE2	P36075	443 aa	Known RBP	4.34	□□□□□ -1.71
YSH1	YLR277C	RFC5	P38251	354 aa		4.34	□□□□□ -1.71
YSH1	YLR277C	AIR1	P40507	360 aa	Known RBP	4.34	□□□□□ -1.71
YSH1	YLR277C	PKP1	P40530	394 aa		4.34	□□□□□ -1.71
YSH1	YLR277C	ROK1	P45818	564 aa	Predicted RBP	4.34	□□□□□ -1.71
YSH1	YLR277C	VMA10	P48836	114 aa	Known RBP	4.34	□□□□□ -1.71
YSH1	YLR277C	MNP1	P53163	194 aa	Predicted RBP	4.34	□□□□□ -1.71
YSH1	YLR277C	YNL193W	P53870	558 aa		4.34	□□□□□ -1.71
YSH1	YLR277C	GIM3	P53900	129 aa		4.34	□□□□□ -1.71
YSH1	YLR277C	YNL108C	P53929	270 aa		4.34	□□□□□ -1.71
YSH1	YLR277C	RRN5	Q02983	363 aa		4.34	□□□□□ -1.71
YSH1	YLR277C	DYN3	Q04949	312 aa		4.34	□□□□□ -1.71
YSH1	YLR277C	YGR161W-C	Q3E744	92 aa		4.34	□□□□□ -1.71
YSH1	YLR277C	SRN2	Q99176	213 aa		4.34	□□□□□ -1.71
YSH1	YLR277C	PDE2	P06776	526 aa		4.34	□□□□□ -1.72
YSH1	YLR277C	SPE2	P21182	396 aa		4.34	□□□□□ -1.72
YSH1	YLR277C	PUP1	P25043	261 aa		4.34	□□□□□ -1.72
YSH1	YLR277C	YKL091C	P33324	310 aa	Known RBP	4.34	□□□□□ -1.72
YSH1	YLR277C	HEL1	P36113	551 aa		4.34	□□□□□ -1.72
YSH1	YLR277C	STV1	P37296	890 aa		4.34	□□□□□ -1.72
YSH1	YLR277C	YHL012W	P38709	493 aa		4.34	□□□□□ -1.72
YSH1	YLR277C	RTC3	P38804	111 aa	Predicted RBP	4.34	□□□□□ -1.72
YSH1	YLR277C	MNN1	P39106	762 aa		4.34	□□□□□ -1.72
YSH1	YLR277C	PCL7	P40186	285 aa		4.34	□□□□□ -1.72
YSH1	YLR277C	JEM1	P40358	645 aa		4.34	□□□□□ -1.72
YSH1	YLR277C	SIW14	P53965	281 aa		4.34	□□□□□ -1.72
YSH1	YLR277C	NSE5	Q03718	556 aa		4.34	□□□□□ -1.72
YSH1	YLR277C	GMC2	Q06201	188 aa		4.34	□□□□□ -1.72
YSH1	YLR277C	ATG13	Q06628	738 aa		4.34	□□□□□ -1.72
YSH1	YLR277C	SYO1	Q07395	620 aa		4.34	□□□□□ -1.72
YSH1	YLR277C	CMS1	Q07897	291 aa	Known RBP	4.34	□□□□□ -1.72
YSH1	YLR277C	SOG2	Q08817	791 aa		4.34	□□□□□ -1.72
YSH1	YLR277C	YOR289W	Q12012	251 aa	Predicted RBP	4.34	□□□□□ -1.72
YSH1	YLR277C	XRN1	P22147	1528 aa	Known RBP	4.34	□□□□□ -1.72
YSH1	YLR277C	MOD5	P07884	428 aa		4.33	□□□□□ -1.72
YSH1	YLR277C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.33	□□□□□ -1.72	not detected
YSH1	YLR277C	MRPL8	P22353	238 aa		4.33	□□□□□ -1.72
YSH1	YLR277C	ICL1	P28240	557 aa	Predicted RBP	4.33	□□□□□ -1.72
YSH1	YLR277C	RPT1	P33299	467 aa	Known RBP	4.33	□□□□□ -1.72
YSH1	YLR277C	SMF2	P38778	549 aa		4.33	□□□□□ -1.72
YSH1	YLR277C	YHR219W	P38900	624 aa		4.33	□□□□□ -1.72
YSH1	YLR277C	DSS1	P39112	969 aa		4.33	□□□□□ -1.72
YSH1	YLR277C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	4.33	□□□□□ -1.72	not detected
YSH1	YLR277C	MDE1	P47095	244 aa		4.33	□□□□□ -1.72
YSH1	YLR277C	DSE4	P53753	1117 aa		4.33	□□□□□ -1.72
YSH1	YLR277C	PTA1	Q01329	785 aa	Predicted RBP	4.33	□□□□□ -1.72
YSH1	YLR277C	ARP10	Q04549	284 aa		4.33	□□□□□ -1.72
YSH1	YLR277C	GAD1	Q04792	585 aa		4.33	□□□□□ -1.72
YSH1	YLR277C	YLR287C	Q05881	355 aa		4.33	□□□□□ -1.72
YSH1	YLR277C	ATG17	Q06410	417 aa		4.33	□□□□□ -1.72
YSH1	YLR277C	LAP2	Q10740	671 aa		4.33	□□□□□ -1.72
YSH1	YLR277C	ENO2	P00925	437 aa	Known RBP	4.33	□□□□□ -1.72
YSH1	YLR277C	PRP5	P21372	849 aa	Predicted RBP	4.33	□□□□□ -1.72
YSH1	YLR277C	SPB1	P25582	841 aa	Predicted RBP	4.33	□□□□□ -1.72
YSH1	YLR277C	MRC1	P25588	1096 aa		4.33	□□□□□ -1.72

Retrieved 100 of 5,963 RNA–protein pairs in 89.1 ms