RNA–Protein interactions for RNA: YLR262C

YPT6, Transcript of Rab family GTPase, yeast

Gene YPT6, Length 648 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPT6	YLR262C	ERG5	P54781	538 aa		5.01	□□□□□ -1.61
YPT6	YLR262C	LRS4	Q04087	347 aa	Known RBP	5.01	□□□□□ -1.61
YPT6	YLR262C	TRM13	Q12383	476 aa		5.01	□□□□□ -1.61
YPT6	YLR262C	MET3	P08536	511 aa		5	□□□□□ -1.61
YPT6	YLR262C	PER1	P25625	357 aa		5	□□□□□ -1.61
YPT6	YLR262C	YGR283C	P53336	341 aa	Predicted RBP	5	□□□□□ -1.61
YPT6	YLR262C	MUK1	Q02866	612 aa		5	□□□□□ -1.61
YPT6	YLR262C	IRC10	Q08118	586 aa		5	□□□□□ -1.61
YPT6	YLR262C	HAL9	Q12180	1030 aa		5	□□□□□ -1.61
YPT6	YLR262C	YOR022C	Q12204	715 aa		5	□□□□□ -1.61
YPT6	YLR262C	TRM11	Q12463	433 aa		5	□□□□□ -1.61
YPT6	YLR262C	PHO8	P11491	566 aa		4.99	□□□□□ -1.61
YPT6	YLR262C	CYS3	P31373	394 aa	Known RBP	4.99	□□□□□ -1.61
YPT6	YLR262C	SCT1	P32784	759 aa		4.99	□□□□□ -1.61
YPT6	YLR262C	CTF13	P35203	478 aa		4.99	□□□□□ -1.61
YPT6	YLR262C	CTF8	P38877	133 aa		4.99	□□□□□ -1.61
YPT6	YLR262C	GDH3	P39708	457 aa		4.99	□□□□□ -1.61
YPT6	YLR262C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.99	□□□□□ -1.61	not detected
YPT6	YLR262C	DLT1	Q04216	342 aa		4.99	□□□□□ -1.61
YPT6	YLR262C	MET7	Q08645	548 aa		4.99	□□□□□ -1.61
YPT6	YLR262C	FRE5	Q08908	694 aa		4.99	□□□□□ -1.61
YPT6	YLR262C	SPC29	P33419	253 aa		4.98	□□□□□ -1.61
YPT6	YLR262C	SAP190	P36123	1033 aa		4.98	□□□□□ -1.61
YPT6	YLR262C	MAL11	P53048	616 aa		4.98	□□□□□ -1.61
YPT6	YLR262C	PRC1	P00729	532 aa		4.97	□□□□□ -1.61
YPT6	YLR262C	MTH1	P35198	433 aa		4.97	□□□□□ -1.61
YPT6	YLR262C	SPC42	P36094	363 aa		4.97	□□□□□ -1.61
YPT6	YLR262C	ATF1	P40353	525 aa		4.97	□□□□□ -1.61
YPT6	YLR262C	DAM1	P53267	343 aa		4.97	□□□□□ -1.61
YPT6	YLR262C	GND2	P53319	492 aa		4.97	□□□□□ -1.61
YPT6	YLR262C	NOG2	P53742	486 aa	Known RBP	4.97	□□□□□ -1.61
YPT6	YLR262C	YDR514C	Q04408	483 aa		4.97	□□□□□ -1.61
YPT6	YLR262C	HBT1	Q07653	1046 aa	Known RBP	4.97	□□□□□ -1.61
YPT6	YLR262C	YLR125W	Q12138	136 aa		4.97	□□□□□ -1.61
YPT6	YLR262C	TUB3	P09734	445 aa	Known RBP	4.96	□□□□□ -1.62
YPT6	YLR262C	THI4	P32318	326 aa		4.96	□□□□□ -1.62
YPT6	YLR262C	ELO3	P40319	345 aa		4.96	□□□□□ -1.62
YPT6	YLR262C	DAS1	P47005	663 aa		4.96	□□□□□ -1.62
YPT6	YLR262C	DUS1	P53759	423 aa	Known RBP	4.96	□□□□□ -1.62
YPT6	YLR262C	CAF20	P12962	161 aa	Known RBP	4.95	□□□□□ -1.62
YPT6	YLR262C	MEF1	P25039	761 aa		4.95	□□□□□ -1.62
YPT6	YLR262C	PPS1	P38148	807 aa		4.95	□□□□□ -1.62
YPT6	YLR262C	YHR078W	P38799	552 aa		4.95	□□□□□ -1.62
YPT6	YLR262C	DSS1	P39112	969 aa		4.95	□□□□□ -1.62
YPT6	YLR262C	TY4A-J	P47023	414 aa		4.95	□□□□□ -1.62
YPT6	YLR262C	YHL017W	P38745	532 aa		4.94	□□□□□ -1.62
YPT6	YLR262C	RPP1	P38786	293 aa		4.94	□□□□□ -1.62
YPT6	YLR262C	FKH2	P41813	862 aa		4.94	□□□□□ -1.62
YPT6	YLR262C	SHR5	P41912	237 aa		4.94	□□□□□ -1.62
YPT6	YLR262C	ORC1	P54784	914 aa	Predicted RBP	4.94	□□□□□ -1.62
YPT6	YLR262C	FPR4	Q06205	392 aa	Predicted RBP	4.94	□□□□□ -1.62
YPT6	YLR262C	RSC3	Q06639	885 aa		4.94	□□□□□ -1.62
YPT6	YLR262C	REH1	Q06709	432 aa		4.94	□□□□□ -1.62
YPT6	YLR262C	PPG1	P32838	368 aa		4.93	□□□□□ -1.62
YPT6	YLR262C	CUE2	P36075	443 aa	Known RBP	4.93	□□□□□ -1.62
YPT6	YLR262C	SDS3	P40505	327 aa		4.93	□□□□□ -1.62
YPT6	YLR262C	OSW7	P43611	510 aa		4.93	□□□□□ -1.62
YPT6	YLR262C	LGE1	Q02796	332 aa	Known RBP	4.93	□□□□□ -1.62
YPT6	YLR262C	ATP25	Q03153	612 aa		4.93	□□□□□ -1.62
YPT6	YLR262C	CRR1	Q05790	422 aa		4.93	□□□□□ -1.62
YPT6	YLR262C	ADY4	Q05955	493 aa		4.93	□□□□□ -1.62
YPT6	YLR262C	VBA3	P25594	458 aa		4.92	□□□□□ -1.62
YPT6	YLR262C	SET5	P38890	526 aa	Known RBP	4.92	□□□□□ -1.62
YPT6	YLR262C	VHR1	P40522	640 aa		4.92	□□□□□ -1.62
YPT6	YLR262C	ALY2	P47029	1046 aa		4.92	□□□□□ -1.62
YPT6	YLR262C	RNH70	P53331	553 aa		4.92	□□□□□ -1.62
YPT6	YLR262C	DIF1	O13577	133 aa		4.91	□□□□□ -1.62
YPT6	YLR262C	CDC9	P04819	755 aa		4.91	□□□□□ -1.62
YPT6	YLR262C	MET6	P05694	767 aa	Known RBP	4.91	□□□□□ -1.62
YPT6	YLR262C	PRP4	P20053	465 aa	Known RBP	4.91	□□□□□ -1.62
YPT6	YLR262C	SAK1	P38990	1142 aa		4.91	□□□□□ -1.62
YPT6	YLR262C	RLP7	P40693	322 aa	Known RBP	4.91	□□□□□ -1.62
YPT6	YLR262C	SSY5	P47002	699 aa		4.91	□□□□□ -1.62
YPT6	YLR262C	HXT16	P47185	567 aa		4.91	□□□□□ -1.62
YPT6	YLR262C	MUP1	P50276	574 aa		4.91	□□□□□ -1.62
YPT6	YLR262C	PKH1	Q03407	766 aa		4.91	□□□□□ -1.62
YPT6	YLR262C	YBR182C-A	Q8TGU6	64 aa		4.91	□□□□□ -1.62
YPT6	YLR262C	MSH2	P25847	964 aa		4.9	□□□□□ -1.63
YPT6	YLR262C	NGG1	P32494	702 aa		4.9	□□□□□ -1.63
YPT6	YLR262C	ALG12	P53730	551 aa		4.9	□□□□□ -1.63
YPT6	YLR262C	ASM4	Q05166	528 aa		4.9	□□□□□ -1.63
YPT6	YLR262C	YDR338C	Q05497	695 aa		4.9	□□□□□ -1.63
YPT6	YLR262C	MRH1	Q12117	320 aa	Predicted RBP	4.9	□□□□□ -1.63
YPT6	YLR262C	PZF1	P39933	429 aa		4.89	□□□□□ -1.63
YPT6	YLR262C	AMA1	P50082	593 aa		4.89	□□□□□ -1.63
YPT6	YLR262C	MRPS35	P53292	345 aa		4.89	□□□□□ -1.63
YPT6	YLR262C	MUS81	Q04149	632 aa	Predicted RBP	4.89	□□□□□ -1.63
YPT6	YLR262C	NTG2	Q08214	380 aa		4.89	□□□□□ -1.63
YPT6	YLR262C	THI21	Q08975	551 aa		4.89	□□□□□ -1.63
YPT6	YLR262C	MDM12	Q92328	271 aa		4.89	□□□□□ -1.63
YPT6	YLR262C	RAD18	P10862	487 aa		4.88	□□□□□ -1.63
YPT6	YLR262C	GSY1	P23337	708 aa		4.88	□□□□□ -1.63
YPT6	YLR262C	MTC2	P34246	357 aa		4.88	□□□□□ -1.63
YPT6	YLR262C	MCD4	P36051	919 aa		4.88	□□□□□ -1.63
YPT6	YLR262C	PFA3	P42836	336 aa		4.88	□□□□□ -1.63
YPT6	YLR262C	ASI2	P53895	289 aa		4.88	□□□□□ -1.63
YPT6	YLR262C	PEX6	P33760	1030 aa		4.87	□□□□□ -1.63
YPT6	YLR262C	YJL163C	P46996	555 aa		4.87	□□□□□ -1.63
YPT6	YLR262C	ZDS1	P50111	915 aa	Known RBP	4.87	□□□□□ -1.63
YPT6	YLR262C	POB3	Q04636	552 aa	Known RBP	4.87	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 48.9 ms