RNA–Protein interactions for RNA: YLR039C

RIC1, Transcript of Protein involved in retrograde transport to the cis-Golgi network, yeast

Gene RIC1, Length 3,171 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RIC1	YLR039C	DOT6	P40059	670 aa	Known RBP	2.62	□□□□□ -1.99
RIC1	YLR039C	GPP2	P40106	250 aa	Known RBP	2.62	□□□□□ -1.99
RIC1	YLR039C	LEE1	Q02799	301 aa	Known RBP	2.62	□□□□□ -1.99
RIC1	YLR039C	DCS2	Q12123	353 aa		2.62	□□□□□ -1.99
RIC1	YLR039C	KIN2	P13186	1147 aa	Known RBP	2.61	□□□□□ -1.99
RIC1	YLR039C	HSP78	P33416	811 aa		2.61	□□□□□ -1.99
RIC1	YLR039C	HSL7	P38274	827 aa		2.61	□□□□□ -1.99
RIC1	YLR039C	GZF3	P42944	551 aa	Known RBP	2.61	□□□□□ -1.99
RIC1	YLR039C	CCT8	P47079	568 aa	Known RBP	2.61	□□□□□ -1.99
RIC1	YLR039C	YGR153W	P48238	217 aa		2.61	□□□□□ -1.99
RIC1	YLR039C	NPY1	P53164	384 aa		2.61	□□□□□ -1.99
RIC1	YLR039C	DUS1	P53759	423 aa	Known RBP	2.61	□□□□□ -1.99
RIC1	YLR039C	TRE2	Q08693	809 aa		2.61	□□□□□ -1.99
RIC1	YLR039C	SLX4	Q12098	748 aa		2.61	□□□□□ -1.99
RIC1	YLR039C	HSF1	P10961	833 aa		2.61	□□□□□ -1.99
RIC1	YLR039C	CCT5	P40413	562 aa	Known RBP	2.61	□□□□□ -1.99
RIC1	YLR039C	MND2	P40577	368 aa		2.61	□□□□□ -1.99
RIC1	YLR039C	NIT2	P47016	307 aa		2.61	□□□□□ -1.99
RIC1	YLR039C	CTH1	P47976	325 aa		2.61	□□□□□ -1.99
RIC1	YLR039C	GTF1	P53260	183 aa	Predicted RBP	2.61	□□□□□ -1.99
RIC1	YLR039C	ROT1	Q03691	256 aa		2.61	□□□□□ -1.99
RIC1	YLR039C	COG8	Q04632	607 aa		2.61	□□□□□ -1.99
RIC1	YLR039C	FAT1	P38225	669 aa		2.61	□□□□□ -1.99
RIC1	YLR039C	TDA3	P38758	523 aa		2.61	□□□□□ -1.99
RIC1	YLR039C	MNN11	P46985	422 aa	Known RBP	2.61	□□□□□ -1.99
RIC1	YLR039C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	2.61	□□□□□ -1.99	not detected
RIC1	YLR039C	ZIP2	P53061	704 aa		2.61	□□□□□ -1.99
RIC1	YLR039C	ENV11	P53246	860 aa		2.61	□□□□□ -1.99
RIC1	YLR039C	RPN7	Q06103	429 aa	Known RBP	2.61	□□□□□ -1.99
RIC1	YLR039C	GPR1	Q12361	961 aa		2.61	□□□□□ -1.99
RIC1	YLR039C	SPE1	P08432	466 aa		2.6	□□□□□ -1.99
RIC1	YLR039C	HIR1	P32479	840 aa		2.6	□□□□□ -1.99
RIC1	YLR039C	SCT1	P32784	759 aa		2.6	□□□□□ -1.99
RIC1	YLR039C	FLR1	P38124	548 aa		2.6	□□□□□ -1.99
RIC1	YLR039C	TOS1	P38288	455 aa		2.6	□□□□□ -1.99
RIC1	YLR039C	RET2	P43621	546 aa		2.6	□□□□□ -1.99
RIC1	YLR039C	BNA2	P47125	453 aa		2.6	□□□□□ -1.99
RIC1	YLR039C	PUS2	P53167	370 aa		2.6	□□□□□ -1.99
RIC1	YLR039C	PIF1	P07271	859 aa		2.6	□□□□□ -1.99
RIC1	YLR039C	PRP4	P20053	465 aa	Known RBP	2.6	□□□□□ -1.99
RIC1	YLR039C	YFL052W	P43551	465 aa		2.6	□□□□□ -1.99
RIC1	YLR039C	TPO1	Q07824	586 aa		2.6	□□□□□ -1.99
RIC1	YLR039C	NSI1	Q12457	570 aa		2.6	□□□□□ -1.99
RIC1	YLR039C	TMA7	Q3E764	64 aa	Known RBP	2.6	□□□□□ -1.99
RIC1	YLR039C	YKR018C	P36114	725 aa		2.59	□□□□□ -1.99
RIC1	YLR039C	DUG1	P43616	481 aa	Known RBP	2.59	□□□□□ -1.99
RIC1	YLR039C	SSY5	P47002	699 aa		2.59	□□□□□ -1.99
RIC1	YLR039C	BRE5	P53741	515 aa	Known RBP	2.59	□□□□□ -1.99
RIC1	YLR039C	ORC3	P54790	616 aa		2.59	□□□□□ -1.99
RIC1	YLR039C	ECM38	Q05902	660 aa	Predicted RBP	2.59	□□□□□ -1.99
RIC1	YLR039C	PUS1	Q12211	544 aa	Known RBP	2.59	□□□□□ -1.99
RIC1	YLR039C	ATP12	P22135	325 aa		2.59	□□□□□ -1.99
RIC1	YLR039C	POA1	P38218	177 aa		2.59	□□□□□ -1.99
RIC1	YLR039C	MSS4	P38994	779 aa		2.59	□□□□□ -1.99
RIC1	YLR039C	ADY3	Q07732	790 aa		2.59	□□□□□ -1.99
RIC1	YLR039C	CDC6	P09119	513 aa		2.59	□□□□□ -2
RIC1	YLR039C	AEP2	P22136	580 aa		2.59	□□□□□ -2
RIC1	YLR039C	STE14	P32584	239 aa		2.59	□□□□□ -2
RIC1	YLR039C	MAL31	P38156	614 aa		2.59	□□□□□ -2
RIC1	YLR039C	CTF8	P38877	133 aa		2.59	□□□□□ -2
RIC1	YLR039C	DAS1	P47005	663 aa		2.59	□□□□□ -2
RIC1	YLR039C	SLU7	Q02775	382 aa	Known RBP	2.59	□□□□□ -2
RIC1	YLR039C	VPS30	Q02948	557 aa		2.59	□□□□□ -2
RIC1	YLR039C	YHM2	Q04013	314 aa		2.59	□□□□□ -2
RIC1	YLR039C	MED7	Q08278	222 aa		2.59	□□□□□ -2
RIC1	YLR039C	UPC2	Q12151	913 aa		2.59	□□□□□ -2
RIC1	YLR039C	SST2	P11972	698 aa	Known RBP	2.58	□□□□□ -2
RIC1	YLR039C	HEM12	P32347	362 aa	Predicted RBP	2.58	□□□□□ -2
RIC1	YLR039C	OAF3	P36023	863 aa		2.58	□□□□□ -2
RIC1	YLR039C	SSZ1	P38788	538 aa	Known RBP	2.58	□□□□□ -2
RIC1	YLR039C	SAK1	P38990	1142 aa		2.58	□□□□□ -2
RIC1	YLR039C	PEA2	P40091	420 aa		2.58	□□□□□ -2
RIC1	YLR039C	SDP1	P40479	209 aa		2.58	□□□□□ -2
RIC1	YLR039C	PCL10	P53124	433 aa		2.58	□□□□□ -2
RIC1	YLR039C	HFI1	Q12060	488 aa		2.58	□□□□□ -2
RIC1	YLR039C	RMP1	Q12530	201 aa		2.58	□□□□□ -2
RIC1	YLR039C	LRG1	P35688	1017 aa		2.58	□□□□□ -2
RIC1	YLR039C	BIT2	P38346	545 aa		2.58	□□□□□ -2
RIC1	YLR039C	YHR078W	P38799	552 aa		2.58	□□□□□ -2
RIC1	YLR039C	FOL2	P51601	243 aa	Known RBP	2.58	□□□□□ -2
RIC1	YLR039C	BRE4	Q07660	1125 aa		2.58	□□□□□ -2
RIC1	YLR039C	TOP1	P04786	769 aa		2.57	□□□□□ -2
RIC1	YLR039C	TUB3	P09734	445 aa	Known RBP	2.57	□□□□□ -2
RIC1	YLR039C	SEC65	P29478	273 aa		2.57	□□□□□ -2
RIC1	YLR039C	PFA3	P42836	336 aa		2.57	□□□□□ -2
RIC1	YLR039C	MET14	Q02196	202 aa		2.57	□□□□□ -2
RIC1	YLR039C	MUS81	Q04149	632 aa	Predicted RBP	2.57	□□□□□ -2
RIC1	YLR039C	DUS4	Q06063	367 aa		2.57	□□□□□ -2
RIC1	YLR039C	HMI1	Q12039	706 aa		2.57	□□□□□ -2
RIC1	YLR039C	GAL1	P04385	528 aa		2.57	□□□□□ -2
RIC1	YLR039C	GLN4	P13188	809 aa	Known RBP	2.57	□□□□□ -2
RIC1	YLR039C	YEF3	P16521	1044 aa	Known RBP	2.57	□□□□□ -2
RIC1	YLR039C	EMC1	P25574	760 aa		2.57	□□□□□ -2
RIC1	YLR039C	DID4	P36108	232 aa		2.57	□□□□□ -2
RIC1	YLR039C	FUI1	P38196	639 aa		2.57	□□□□□ -2
RIC1	YLR039C	URM1	P40554	99 aa	Predicted RBP	2.57	□□□□□ -2
RIC1	YLR039C	MET12	P46151	657 aa		2.57	□□□□□ -2
RIC1	YLR039C	COX11	P19516	300 aa	Known RBP	2.57	□□□□□ -2
RIC1	YLR039C	SEC21	P32074	935 aa	Known RBP	2.57	□□□□□ -2
RIC1	YLR039C	PUB1	P32588	453 aa	Known RBP RIP-Chip data	2.57	□□□□□ -2	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 17 ms