RNA–Protein interactions for RNA: YKR001C

VPS1, Transcript of Dynamin-like GTPase required for vacuolar sorting, yeastyeast

Gene VPS1, Length 2,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS1YKR001C GLK1P17709 500 aaKnown RBP5.81□□□□□ -1.48
VPS1YKR001C TEF4P36008 412 aaKnown RBP5.81□□□□□ -1.48
VPS1YKR001C MIC60P36112 540 aa5.81□□□□□ -1.48
VPS1YKR001C ARL1P38116 183 aaKnown RBP5.81□□□□□ -1.48
VPS1YKR001C YSW1P38280 609 aa5.81□□□□□ -1.48
VPS1YKR001C PIH1P38768 344 aa5.81□□□□□ -1.48
VPS1YKR001C YJL007CP47080 104 aa5.81□□□□□ -1.48
VPS1YKR001C SSN8P47821 323 aa5.81□□□□□ -1.48
VPS1YKR001C LSG1P53145 640 aaKnown RBP5.81□□□□□ -1.48
VPS1YKR001C SEC5P89102 971 aa5.81□□□□□ -1.48
VPS1YKR001C UBP2Q01476 1272 aa5.81□□□□□ -1.48
VPS1YKR001C CRN1Q06440 651 aa5.81□□□□□ -1.48
VPS1YKR001C MET7Q08645 548 aa5.81□□□□□ -1.48
VPS1YKR001C IOC2Q12072 812 aa5.81□□□□□ -1.48
VPS1YKR001C TFC8Q12308 588 aa5.81□□□□□ -1.48
VPS1YKR001C TUS1Q06412 1307 aa5.81□□□□□ -1.48
VPS1YKR001C SSC1P0CS90 654 aaKnown RBP5.81□□□□□ -1.48
VPS1YKR001C SUI2P20459 304 aaKnown RBP5.81□□□□□ -1.48
VPS1YKR001C TRZ1P36159 838 aaPredicted RBP5.81□□□□□ -1.48
VPS1YKR001C AGX1P43567 385 aa5.81□□□□□ -1.48
VPS1YKR001C COP1P53622 1201 aaKnown RBP5.81□□□□□ -1.48
VPS1YKR001C BRE5P53741 515 aaKnown RBP5.81□□□□□ -1.48
VPS1YKR001C DON1Q05610 365 aa5.81□□□□□ -1.48
VPS1YKR001C HIS3P06633 220 aa5.8□□□□□ -1.48
VPS1YKR001C SEC18P18759 758 aaKnown RBP5.8□□□□□ -1.48
VPS1YKR001C PRE10P21242 288 aaKnown RBP RIP-Chip data5.8□□□□□ -1.48not detected
VPS1YKR001C MRPS28P21771 286 aa5.8□□□□□ -1.48
VPS1YKR001C PER1P25625 357 aa5.8□□□□□ -1.48
VPS1YKR001C BAP2P38084 609 aa5.8□□□□□ -1.48
VPS1YKR001C SAK1P38990 1142 aa5.8□□□□□ -1.48
VPS1YKR001C YHB1P39676 399 aaKnown RBP5.8□□□□□ -1.48
VPS1YKR001C MTW1P39731 289 aa5.8□□□□□ -1.48
VPS1YKR001C AFG3P39925 761 aa5.8□□□□□ -1.48
VPS1YKR001C ALD5P40047 520 aaKnown RBP5.8□□□□□ -1.48
VPS1YKR001C NUP85P46673 744 aa5.8□□□□□ -1.48
VPS1YKR001C MIG2P53035 382 aa5.8□□□□□ -1.48
VPS1YKR001C YGR067CP53243 804 aa5.8□□□□□ -1.48
VPS1YKR001C FDC1Q03034 503 aa5.8□□□□□ -1.48
VPS1YKR001C MLH2Q07980 695 aa5.8□□□□□ -1.48
VPS1YKR001C ACF2Q12168 779 aa5.8□□□□□ -1.48
VPS1YKR001C GYP5Q12344 894 aa5.8□□□□□ -1.48
VPS1YKR001C UBR2Q07963 1872 aa5.8□□□□□ -1.48
VPS1YKR001C PIF1P07271 859 aa5.8□□□□□ -1.48
VPS1YKR001C FUS1P11710 512 aa5.8□□□□□ -1.48
VPS1YKR001C VPH2P32341 215 aa5.8□□□□□ -1.48
VPS1YKR001C ASF2P32448 525 aaPredicted RBP5.8□□□□□ -1.48
VPS1YKR001C UBC6P33296 250 aaPredicted RBP5.8□□□□□ -1.48
VPS1YKR001C YKR018CP36114 725 aa5.8□□□□□ -1.48
VPS1YKR001C MSC7P38694 644 aa5.8□□□□□ -1.48
VPS1YKR001C HAL5P38970 855 aaKnown RBP5.8□□□□□ -1.48
VPS1YKR001C APS3P47064 194 aa5.8□□□□□ -1.48
VPS1YKR001C URB2P47108 1174 aa5.8□□□□□ -1.48
VPS1YKR001C YJR107WP47145 328 aa5.8□□□□□ -1.48
VPS1YKR001C UBA2P52488 636 aa5.8□□□□□ -1.48
VPS1YKR001C MDR1P53258 950 aa5.8□□□□□ -1.48
VPS1YKR001C RRP17Q04031 235 aaPredicted RBP5.8□□□□□ -1.48
VPS1YKR001C TSR1Q07381 788 aaKnown RBP5.8□□□□□ -1.48
VPS1YKR001C YDL124WQ07551 312 aaKnown RBP5.8□□□□□ -1.48
VPS1YKR001C PDR18P53756 1333 aa5.79□□□□□ -1.48
VPS1YKR001C ADE8P04161 214 aa5.79□□□□□ -1.48
VPS1YKR001C RAD27P26793 382 aa5.79□□□□□ -1.48
VPS1YKR001C SLX5P32828 619 aaKnown RBP5.79□□□□□ -1.48
VPS1YKR001C SLA2P33338 968 aa5.79□□□□□ -1.48
VPS1YKR001C TFC4P33339 1025 aa5.79□□□□□ -1.48
VPS1YKR001C DUR3P33413 735 aa5.79□□□□□ -1.48
VPS1YKR001C SEC66P33754 206 aa5.79□□□□□ -1.48
VPS1YKR001C YRO2P38079 344 aa5.79□□□□□ -1.48
VPS1YKR001C SAE2P46946 345 aa5.79□□□□□ -1.48
VPS1YKR001C PIP2P52960 996 aa5.79□□□□□ -1.48
VPS1YKR001C YGL242CP53066 181 aa5.79□□□□□ -1.48
VPS1YKR001C PLP1Q04004 230 aa5.79□□□□□ -1.48
VPS1YKR001C ESC2Q06340 456 aa5.79□□□□□ -1.48
VPS1YKR001C YOR378WQ08902 515 aa5.79□□□□□ -1.48
VPS1YKR001C ILS1P09436 1072 aaKnown RBP5.78□□□□□ -1.48
VPS1YKR001C DSF1P0CX08 502 aa5.78□□□□□ -1.48
VPS1YKR001C YNR073CP0CX09 502 aa5.78□□□□□ -1.48
VPS1YKR001C PCT1P13259 424 aa5.78□□□□□ -1.48
VPS1YKR001C KSS1P14681 368 aa5.78□□□□□ -1.48
VPS1YKR001C RGP1P16664 663 aa5.78□□□□□ -1.48
VPS1YKR001C MTC2P34246 357 aa5.78□□□□□ -1.48
VPS1YKR001C KAP123P40069 1113 aaKnown RBP5.78□□□□□ -1.48
VPS1YKR001C BUD6P41697 788 aa5.78□□□□□ -1.48
VPS1YKR001C DAK2P43550 591 aa5.78□□□□□ -1.48
VPS1YKR001C UBP15P50101 1230 aa5.78□□□□□ -1.48
VPS1YKR001C GCR2Q01722 534 aa5.78□□□□□ -1.48
VPS1YKR001C MUB1Q03162 620 aa5.78□□□□□ -1.48
VPS1YKR001C ESF1Q06344 628 aaKnown RBP5.78□□□□□ -1.48
VPS1YKR001C MAG2Q06436 670 aaKnown RBP5.78□□□□□ -1.48
VPS1YKR001C TRP2P00899 507 aaKnown RBP5.78□□□□□ -1.48
VPS1YKR001C SCP160P06105 1222 aaKnown RBP RIP-Chip data5.78□□□□□ -1.48 RIP-Chip
VPS1YKR001C CKA2P19454 339 aa5.78□□□□□ -1.48
VPS1YKR001C NTG1P31378 399 aa5.78□□□□□ -1.48
VPS1YKR001C SRP40P32583 406 aaPredicted RBP5.78□□□□□ -1.48
VPS1YKR001C SSE1P32589 693 aaKnown RBP5.78□□□□□ -1.48
VPS1YKR001C SSO1P32867 290 aa5.78□□□□□ -1.48
VPS1YKR001C DOM34P33309 386 aa5.78□□□□□ -1.48
VPS1YKR001C RIB7P33312 244 aa5.78□□□□□ -1.48
VPS1YKR001C BOI1P38041 980 aaKnown RBP5.78□□□□□ -1.48
VPS1YKR001C CST26P38226 397 aa5.78□□□□□ -1.48
VPS1YKR001C REI1P38344 393 aaPredicted RBP5.78□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 79.3 ms