RNA–Protein interactions for RNA: YJL192C

SOP4, Transcript of ER-membrane protein, yeastyeast

Gene SOP4, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOP4YJL192C CLN2P20438 545 aa4.45□□□□□ -1.7
SOP4YJL192C MPE1P35728 441 aaKnown RBP4.45□□□□□ -1.7
SOP4YJL192C POA1P38218 177 aa4.45□□□□□ -1.7
SOP4YJL192C STU2P46675 888 aa4.45□□□□□ -1.7
SOP4YJL192C PHO23P50947 330 aa4.45□□□□□ -1.7
SOP4YJL192C RRP46P53256 223 aaPredicted RBP4.45□□□□□ -1.7
SOP4YJL192C SRT1Q03175 343 aa4.45□□□□□ -1.7
SOP4YJL192C NUP145P49687 1317 aa4.45□□□□□ -1.7
SOP4YJL192C HCM1P25364 564 aa4.44□□□□□ -1.7
SOP4YJL192C SPC110P32380 944 aa4.44□□□□□ -1.7
SOP4YJL192C PIN4P34217 668 aaKnown RBP RIP-Chip data4.44□□□□□ -1.7not detected
SOP4YJL192C KRI1P42846 591 aaKnown RBP4.44□□□□□ -1.7
SOP4YJL192C CIR1P42940 261 aa4.44□□□□□ -1.7
SOP4YJL192C SFB2P53953 876 aa4.44□□□□□ -1.7
SOP4YJL192C COG8Q04632 607 aa4.44□□□□□ -1.7
SOP4YJL192C CDA1Q06702 301 aa4.44□□□□□ -1.7
SOP4YJL192C ADY3Q07732 790 aa4.44□□□□□ -1.7
SOP4YJL192C NOP12Q08208 459 aaKnown RBP4.44□□□□□ -1.7
SOP4YJL192C YRF1-2P40105 1681 aa4.44□□□□□ -1.7
SOP4YJL192C LYS2P07702 1392 aa4.43□□□□□ -1.7
SOP4YJL192C URB1P34241 1764 aaKnown RBP4.43□□□□□ -1.7
SOP4YJL192C STE11P23561 717 aa4.43□□□□□ -1.7
SOP4YJL192C AGP1P25376 633 aa4.43□□□□□ -1.7
SOP4YJL192C SBA1P28707 216 aaKnown RBP4.43□□□□□ -1.7
SOP4YJL192C VBA5P36172 582 aa4.43□□□□□ -1.7
SOP4YJL192C PBY1P38254 753 aa4.43□□□□□ -1.7
SOP4YJL192C PLB1P39105 664 aa4.43□□□□□ -1.7
SOP4YJL192C RAD26P40352 1085 aa4.43□□□□□ -1.7
SOP4YJL192C MNN10P50108 393 aaKnown RBP4.43□□□□□ -1.7
SOP4YJL192C YGR012WP53206 393 aa4.43□□□□□ -1.7
SOP4YJL192C HST1P53685 503 aa4.43□□□□□ -1.7
SOP4YJL192C DUS3Q06053 668 aaKnown RBP4.43□□□□□ -1.7
SOP4YJL192C OPI10Q08202 246 aa4.43□□□□□ -1.7
SOP4YJL192C CDC12P32468 407 aaKnown RBP4.42□□□□□ -1.7
SOP4YJL192C RPN12P32496 274 aa4.42□□□□□ -1.7
SOP4YJL192C LTV1P34078 463 aa4.42□□□□□ -1.7
SOP4YJL192C ECM21P38167 1117 aaKnown RBP4.42□□□□□ -1.7
SOP4YJL192C VAC8P39968 578 aa4.42□□□□□ -1.7
SOP4YJL192C MET12P46151 657 aa4.42□□□□□ -1.7
SOP4YJL192C RSC1P53236 928 aa4.42□□□□□ -1.7
SOP4YJL192C ALD6P54115 500 aaKnown RBP4.42□□□□□ -1.7
SOP4YJL192C RAD50P12753 1312 aa4.42□□□□□ -1.7
SOP4YJL192C PSK1P31374 1356 aa4.41□□□□□ -1.7
SOP4YJL192C SPE1P08432 466 aa4.41□□□□□ -1.7
SOP4YJL192C PRD1P25375 712 aa4.41□□□□□ -1.7
SOP4YJL192C FUN30P31380 1131 aa4.41□□□□□ -1.7
SOP4YJL192C BYE1P36106 594 aa4.41□□□□□ -1.7
SOP4YJL192C YAP3P38749 330 aa4.41□□□□□ -1.7
SOP4YJL192C CEP3P40969 608 aa4.41□□□□□ -1.7
SOP4YJL192C VPS60Q03390 229 aa4.41□□□□□ -1.7
SOP4YJL192C FPR4Q06205 392 aaPredicted RBP4.41□□□□□ -1.7
SOP4YJL192C THI22Q06490 572 aa4.41□□□□□ -1.7
SOP4YJL192C WHI4Q07655 649 aaKnown RBP4.41□□□□□ -1.7
SOP4YJL192C YLL058WQ12198 575 aa4.41□□□□□ -1.7
SOP4YJL192C NTO1Q12311 748 aa4.41□□□□□ -1.7
SOP4YJL192C RPP2AP05319 106 aaKnown RBP4.4□□□□□ -1.71
SOP4YJL192C HIS5P07172 385 aa4.4□□□□□ -1.71
SOP4YJL192C TRM2P33753 639 aa4.4□□□□□ -1.71
SOP4YJL192C CCC2P38995 1004 aa4.4□□□□□ -1.71
SOP4YJL192C RTR1P40084 226 aaPredicted RBP4.4□□□□□ -1.71
SOP4YJL192C SUN4P53616 420 aa4.4□□□□□ -1.71
SOP4YJL192C YDR306CQ06640 478 aa4.4□□□□□ -1.71
SOP4YJL192C YOL087CQ99247 1116 aa4.4□□□□□ -1.71
SOP4YJL192C RNA1P11745 407 aaKnown RBP4.39□□□□□ -1.71
SOP4YJL192C DAL5P15365 543 aa4.39□□□□□ -1.71
SOP4YJL192C SRP54P20424 541 aaKnown RBP4.39□□□□□ -1.71
SOP4YJL192C ERT1P38140 529 aa4.39□□□□□ -1.71
SOP4YJL192C MED8P38304 223 aa4.39□□□□□ -1.71
SOP4YJL192C NMD2P38798 1089 aaKnown RBP4.39□□□□□ -1.71
SOP4YJL192C MSE1P48525 536 aa4.39□□□□□ -1.71
SOP4YJL192C CWC22P53333 577 aaKnown RBP4.39□□□□□ -1.71
SOP4YJL192C TAP42Q04372 366 aa4.39□□□□□ -1.71
SOP4YJL192C SVF1Q05515 481 aa4.39□□□□□ -1.71
SOP4YJL192C KCS1Q12494 1050 aa4.39□□□□□ -1.71
SOP4YJL192C NPP1P25353 742 aa4.38□□□□□ -1.71
SOP4YJL192C MSH1P25846 959 aa4.38□□□□□ -1.71
SOP4YJL192C PPH3P32345 308 aa4.38□□□□□ -1.71
SOP4YJL192C YER158CP40095 573 aa4.38□□□□□ -1.71
SOP4YJL192C RSM25P40496 264 aa4.38□□□□□ -1.71
SOP4YJL192C GUS1P46655 708 aaKnown RBP RIP-Chip data4.38□□□□□ -1.71not detected
SOP4YJL192C NPA3P47122 385 aa4.38□□□□□ -1.71
SOP4YJL192C KIN4Q01919 800 aa4.38□□□□□ -1.71
SOP4YJL192C RNT1Q02555 471 aa4.38□□□□□ -1.71
SOP4YJL192C SRP1Q02821 542 aaKnown RBP4.38□□□□□ -1.71
SOP4YJL192C YPR196WQ06595 470 aa4.38□□□□□ -1.71
SOP4YJL192C PUS9Q12069 462 aa4.38□□□□□ -1.71
SOP4YJL192C NPC2Q12408 173 aa4.38□□□□□ -1.71
SOP4YJL192C PMA1P05030 918 aaKnown RBP4.37□□□□□ -1.71
SOP4YJL192C HSF1P10961 833 aa4.37□□□□□ -1.71
SOP4YJL192C STE5P32917 917 aa4.37□□□□□ -1.71
SOP4YJL192C MIC60P36112 540 aa4.37□□□□□ -1.71
SOP4YJL192C TSL1P38427 1098 aaKnown RBP4.37□□□□□ -1.71
SOP4YJL192C SIC1P38634 284 aa4.37□□□□□ -1.71
SOP4YJL192C ECM1P39715 212 aa4.37□□□□□ -1.71
SOP4YJL192C AIM21P40563 679 aa4.37□□□□□ -1.71
SOP4YJL192C SLI1P53304 468 aa4.37□□□□□ -1.71
SOP4YJL192C MRS2Q01926 470 aa4.37□□□□□ -1.71
SOP4YJL192C VPS72Q03388 795 aa4.37□□□□□ -1.71
SOP4YJL192C SHE9Q04172 456 aa4.37□□□□□ -1.71
SOP4YJL192C PNS1Q12412 539 aa4.37□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms