RNA–Protein interactions for RNA: YJL176C

SWI3, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SWI3, Length 2,478 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI3YJL176C PKH2Q12236 1081 aaKnown RBP5.03□□□□□ -1.6
SWI3YJL176C TFC8Q12308 588 aa5.03□□□□□ -1.6
SWI3YJL176C PRC1P00729 532 aa5.02□□□□□ -1.61
SWI3YJL176C POL3P15436 1097 aa5.02□□□□□ -1.61
SWI3YJL176C SEC21P32074 935 aaKnown RBP5.02□□□□□ -1.61
SWI3YJL176C SWI3P32591 825 aa5.02□□□□□ -1.61
SWI3YJL176C RAD54P32863 898 aa5.02□□□□□ -1.61
SWI3YJL176C YKL023WP36103 277 aaKnown RBP5.02□□□□□ -1.61
SWI3YJL176C CCL1P37366 393 aa5.02□□□□□ -1.61
SWI3YJL176C RKM3P38222 552 aa5.02□□□□□ -1.61
SWI3YJL176C EFM2P38347 419 aa5.02□□□□□ -1.61
SWI3YJL176C XDJ1P39102 459 aa5.02□□□□□ -1.61
SWI3YJL176C RSC1P53236 928 aa5.02□□□□□ -1.61
SWI3YJL176C PNG1Q02890 363 aa5.02□□□□□ -1.61
SWI3YJL176C RCR2Q03446 210 aaKnown RBP5.02□□□□□ -1.61
SWI3YJL176C YPR148CQ06523 435 aa5.02□□□□□ -1.61
SWI3YJL176C SPO75Q07798 868 aa5.02□□□□□ -1.61
SWI3YJL176C TMA16Q08687 178 aa5.02□□□□□ -1.61
SWI3YJL176C SLX4Q12098 748 aa5.02□□□□□ -1.61
SWI3YJL176C CYS3P31373 394 aaKnown RBP5.02□□□□□ -1.61
SWI3YJL176C MNR2P35724 969 aa5.02□□□□□ -1.61
SWI3YJL176C SPT8P38915 602 aa5.02□□□□□ -1.61
SWI3YJL176C MGA2P40578 1113 aa5.02□□□□□ -1.61
SWI3YJL176C TFG2P41896 400 aaPredicted RBP5.02□□□□□ -1.61
SWI3YJL176C SSL2Q00578 843 aa5.02□□□□□ -1.61
SWI3YJL176C RPA49Q01080 415 aaPredicted RBP5.02□□□□□ -1.61
SWI3YJL176C TBF1Q02457 562 aa5.02□□□□□ -1.61
SWI3YJL176C EEB1Q02891 456 aa5.02□□□□□ -1.61
SWI3YJL176C WAR1Q03631 944 aa5.02□□□□□ -1.61
SWI3YJL176C CEF1Q03654 590 aaPredicted RBP5.02□□□□□ -1.61
SWI3YJL176C RGA2Q06407 1009 aa5.02□□□□□ -1.61
SWI3YJL176C TAO3P40468 2376 aa5.02□□□□□ -1.61
SWI3YJL176C HAP2P06774 265 aa5.01□□□□□ -1.61
SWI3YJL176C URK1P27515 501 aa5.01□□□□□ -1.61
SWI3YJL176C MIP6P38760 659 aaKnown RBP5.01□□□□□ -1.61
SWI3YJL176C MMF1P40185 145 aaKnown RBP5.01□□□□□ -1.61
SWI3YJL176C YFL052WP43551 465 aa5.01□□□□□ -1.61
SWI3YJL176C SMC3P47037 1230 aa5.01□□□□□ -1.61
SWI3YJL176C NOP13P53883 403 aaKnown RBP RIP-Chip data5.01□□□□□ -1.61not detected
SWI3YJL176C SPO71Q03868 1245 aa5.01□□□□□ -1.61
SWI3YJL176C YLR297WQ05899 129 aa5.01□□□□□ -1.61
SWI3YJL176C IWR1Q07532 353 aaPredicted RBP5.01□□□□□ -1.61
SWI3YJL176C REC8Q12188 680 aa5.01□□□□□ -1.61
SWI3YJL176C GIS3Q12418 502 aa5.01□□□□□ -1.61
SWI3YJL176C YDL206WQ12424 762 aa5.01□□□□□ -1.61
SWI3YJL176C CIT2P08679 460 aa5.01□□□□□ -1.61
SWI3YJL176C SAP190P36123 1033 aa5.01□□□□□ -1.61
SWI3YJL176C MRPL10P36520 322 aa5.01□□□□□ -1.61
SWI3YJL176C YEL023CP39992 682 aa5.01□□□□□ -1.61
SWI3YJL176C KAP123P40069 1113 aaKnown RBP5.01□□□□□ -1.61
SWI3YJL176C STB4P50104 949 aa5.01□□□□□ -1.61
SWI3YJL176C INP52P50942 1183 aa5.01□□□□□ -1.61
SWI3YJL176C SPP1Q03012 353 aa5.01□□□□□ -1.61
SWI3YJL176C SNU56Q03782 492 aaKnown RBP5.01□□□□□ -1.61
SWI3YJL176C MRN1Q08925 612 aaKnown RBP RIP-Chip data5.01□□□□□ -1.61 RIP-Chip
SWI3YJL176C CTF3Q12748 733 aa5.01□□□□□ -1.61
SWI3YJL176C IME1P21190 360 aa5□□□□□ -1.61
SWI3YJL176C VPS3P23643 1011 aa5□□□□□ -1.61
SWI3YJL176C MSH3P25336 1018 aa5□□□□□ -1.61
SWI3YJL176C PTC4P38089 393 aa5□□□□□ -1.61
SWI3YJL176C RFS1P38234 210 aaKnown RBP5□□□□□ -1.61
SWI3YJL176C KIC1P38692 1080 aa5□□□□□ -1.61
SWI3YJL176C YCK3P39962 524 aa5□□□□□ -1.61
SWI3YJL176C FAF1P40546 346 aaPredicted RBP5□□□□□ -1.61
SWI3YJL176C FYV8P46949 817 aaKnown RBP5□□□□□ -1.61
SWI3YJL176C STP1Q00947 519 aa5□□□□□ -1.61
SWI3YJL176C MRI1Q06489 411 aaKnown RBP5□□□□□ -1.61
SWI3YJL176C COX11P19516 300 aaKnown RBP5□□□□□ -1.61
SWI3YJL176C SPO11P23179 398 aa5□□□□□ -1.61
SWI3YJL176C SYN8P31377 255 aa5□□□□□ -1.61
SWI3YJL176C CBF2P32504 956 aa5□□□□□ -1.61
SWI3YJL176C HMT1P38074 348 aa5□□□□□ -1.61
SWI3YJL176C TBS1P38114 1094 aa5□□□□□ -1.61
SWI3YJL176C CPR7P47103 393 aa5□□□□□ -1.61
SWI3YJL176C ALT1P52893 592 aa5□□□□□ -1.61
SWI3YJL176C SPC98P53540 846 aa5□□□□□ -1.61
SWI3YJL176C STE20Q03497 939 aaKnown RBP5□□□□□ -1.61
SWI3YJL176C TIF35Q04067 274 aaKnown RBP5□□□□□ -1.61
SWI3YJL176C LCD1Q04377 747 aa5□□□□□ -1.61
SWI3YJL176C YML083CQ04526 418 aa5□□□□□ -1.61
SWI3YJL176C CDD1Q06549 142 aa5□□□□□ -1.61
SWI3YJL176C CSR1Q06705 408 aaKnown RBP5□□□□□ -1.61
SWI3YJL176C ABP140Q08641 628 aaKnown RBP5□□□□□ -1.61
SWI3YJL176C GAL80P04387 435 aa4.99□□□□□ -1.61
SWI3YJL176C ATP1P07251 545 aaKnown RBP4.99□□□□□ -1.61
SWI3YJL176C KGD2P19262 463 aaPredicted RBP4.99□□□□□ -1.61
SWI3YJL176C RRT12P25381 491 aa4.99□□□□□ -1.61
SWI3YJL176C KNS1P32350 737 aaPredicted RBP4.99□□□□□ -1.61
SWI3YJL176C VPH1P32563 840 aaKnown RBP4.99□□□□□ -1.61
SWI3YJL176C SIP5P40210 489 aaKnown RBP4.99□□□□□ -1.61
SWI3YJL176C YNL034WP53963 612 aa4.99□□□□□ -1.61
SWI3YJL176C YNL018CP53976 612 aa4.99□□□□□ -1.61
SWI3YJL176C UBP3Q01477 912 aaKnown RBP RIP-Chip data4.99□□□□□ -1.61not detected
SWI3YJL176C PLP2Q12017 286 aa4.99□□□□□ -1.61
SWI3YJL176C VPS13Q07878 3144 aa4.99□□□□□ -1.61
SWI3YJL176C GAL10P04397 699 aa4.99□□□□□ -1.61
SWI3YJL176C CDC42P19073 191 aa4.99□□□□□ -1.61
SWI3YJL176C KIP1P28742 1111 aa4.99□□□□□ -1.61
SWI3YJL176C SEC65P29478 273 aa4.99□□□□□ -1.61
SWI3YJL176C NIP100P33420 868 aa4.99□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 23.5 ms