RNA–Protein interactions for RNA: YJL104W

PAM16, Transcript of Subunit of the import motor (PAM complex), yeast

Gene PAM16, Length 450 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAM16	YJL104W	URA1	P28272	314 aa	Predicted RBP	2.69	□□□□□ -1.98
PAM16	YJL104W	ABD1	P32783	436 aa	Predicted RBP	2.69	□□□□□ -1.98
PAM16	YJL104W	GLG1	P36143	616 aa		2.69	□□□□□ -1.98
PAM16	YJL104W	MBP1	P39678	833 aa		2.69	□□□□□ -1.98
PAM16	YJL104W	PZF1	P39933	429 aa		2.69	□□□□□ -1.98
PAM16	YJL104W	RSP5	P39940	809 aa	Known RBP	2.69	□□□□□ -1.98
PAM16	YJL104W	ARG2	P40360	574 aa		2.69	□□□□□ -1.98
PAM16	YJL104W	MEP2	P41948	499 aa		2.69	□□□□□ -1.98
PAM16	YJL104W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	2.69	□□□□□ -1.98	not detected
PAM16	YJL104W	UBC11	P52492	156 aa		2.69	□□□□□ -1.98
PAM16	YJL104W	YDR306C	Q06640	478 aa		2.69	□□□□□ -1.98
PAM16	YJL104W	SLK19	Q08581	821 aa	Known RBP	2.69	□□□□□ -1.98
PAM16	YJL104W	PGK1	P00560	416 aa	Known RBP	2.68	□□□□□ -1.98
PAM16	YJL104W	STE4	P18851	423 aa		2.68	□□□□□ -1.98
PAM16	YJL104W	SBA1	P28707	216 aa	Known RBP	2.68	□□□□□ -1.98
PAM16	YJL104W	REV7	P38927	245 aa		2.68	□□□□□ -1.98
PAM16	YJL104W	CCM1	P48237	864 aa	Predicted RBP	2.68	□□□□□ -1.98
PAM16	YJL104W	TPO2	P53283	614 aa		2.68	□□□□□ -1.98
PAM16	YJL104W	VPS16	Q03308	798 aa		2.68	□□□□□ -1.98
PAM16	YJL104W	ATG11	Q12527	1178 aa		2.68	□□□□□ -1.98
PAM16	YJL104W	SPC29	P33419	253 aa		2.67	□□□□□ -1.98
PAM16	YJL104W	CTR1	P49573	406 aa		2.67	□□□□□ -1.98
PAM16	YJL104W	UBC9	P50623	157 aa	Predicted RBP	2.67	□□□□□ -1.98
PAM16	YJL104W	ASM4	Q05166	528 aa		2.67	□□□□□ -1.98
PAM16	YJL104W	CIR2	Q08822	631 aa		2.67	□□□□□ -1.98
PAM16	YJL104W	YLR415C	O13578	112 aa		2.66	□□□□□ -1.98
PAM16	YJL104W	PYC1	P11154	1178 aa	Known RBP	2.66	□□□□□ -1.98
PAM16	YJL104W	AAR2	P32357	355 aa	Predicted RBP	2.66	□□□□□ -1.98
PAM16	YJL104W	HIR1	P32479	840 aa		2.66	□□□□□ -1.98
PAM16	YJL104W	MNR2	P35724	969 aa		2.66	□□□□□ -1.98
PAM16	YJL104W	YRO2	P38079	344 aa		2.66	□□□□□ -1.98
PAM16	YJL104W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	2.66	□□□□□ -1.98	not detected
PAM16	YJL104W	HOS4	P40480	1083 aa		2.66	□□□□□ -1.98
PAM16	YJL104W	HDA1	P53973	706 aa		2.66	□□□□□ -1.98
PAM16	YJL104W	AGP1	P25376	633 aa		2.65	□□□□□ -1.99
PAM16	YJL104W	AFR1	P33304	620 aa		2.65	□□□□□ -1.99
PAM16	YJL104W	MUP3	P38734	546 aa		2.65	□□□□□ -1.99
PAM16	YJL104W	DUS1	P53759	423 aa	Known RBP	2.65	□□□□□ -1.99
PAM16	YJL104W	SEN54	Q02825	467 aa	Predicted RBP	2.65	□□□□□ -1.99
PAM16	YJL104W	MUS81	Q04149	632 aa	Predicted RBP	2.65	□□□□□ -1.99
PAM16	YJL104W	TGL5	Q12043	749 aa		2.65	□□□□□ -1.99
PAM16	YJL104W	NOP1	P15646	327 aa	Known RBP	2.64	□□□□□ -1.99
PAM16	YJL104W	ATE1	P16639	503 aa		2.64	□□□□□ -1.99
PAM16	YJL104W	NUP1	P20676	1076 aa		2.64	□□□□□ -1.99
PAM16	YJL104W	SIC1	P38634	284 aa		2.64	□□□□□ -1.99
PAM16	YJL104W	SIT1	P39980	628 aa		2.64	□□□□□ -1.99
PAM16	YJL104W	YKL033W-A	Q86ZR7	236 aa		2.64	□□□□□ -1.99
PAM16	YJL104W	SIR3	P06701	978 aa		2.63	□□□□□ -1.99
PAM16	YJL104W	CCR4	P31384	837 aa	Known RBP	2.63	□□□□□ -1.99
PAM16	YJL104W	SAK1	P38990	1142 aa		2.63	□□□□□ -1.99
PAM16	YJL104W	SCT1	P32784	759 aa		2.62	□□□□□ -1.99
PAM16	YJL104W	CCT3	P39077	534 aa	Known RBP	2.62	□□□□□ -1.99
PAM16	YJL104W	BAP3	P41815	604 aa		2.62	□□□□□ -1.99
PAM16	YJL104W	PFA3	P42836	336 aa		2.62	□□□□□ -1.99
PAM16	YJL104W	YPL068C	Q02749	293 aa		2.62	□□□□□ -1.99
PAM16	YJL104W	FAL1	Q12099	399 aa	Known RBP	2.62	□□□□□ -1.99
PAM16	YJL104W	HAL9	Q12180	1030 aa		2.62	□□□□□ -1.99
PAM16	YJL104W	ATG4	P53867	494 aa		2.61	□□□□□ -1.99
PAM16	YJL104W	STP1	Q00947	519 aa		2.61	□□□□□ -1.99
PAM16	YJL104W	LCD1	Q04377	747 aa		2.61	□□□□□ -1.99
PAM16	YJL104W	RPA135	P22138	1203 aa	Known RBP	2.6	□□□□□ -1.99
PAM16	YJL104W	REC104	P33323	182 aa		2.6	□□□□□ -1.99
PAM16	YJL104W	SSY5	P47002	699 aa		2.6	□□□□□ -1.99
PAM16	YJL104W	FAA4	P47912	694 aa	Known RBP	2.6	□□□□□ -1.99
PAM16	YJL104W	FMP30	Q02883	468 aa		2.6	□□□□□ -1.99
PAM16	YJL104W	GAD1	Q04792	585 aa		2.6	□□□□□ -1.99
PAM16	YJL104W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	2.59	□□□□□ -1.99	not detected
PAM16	YJL104W	APN1	P22936	367 aa		2.59	□□□□□ -1.99
PAM16	YJL104W	VBA5	P36172	582 aa		2.59	□□□□□ -1.99
PAM16	YJL104W	UBS1	P38290	277 aa		2.59	□□□□□ -1.99
PAM16	YJL104W	YBR259W	P38338	688 aa		2.59	□□□□□ -1.99
PAM16	YJL104W	PAN2	P53010	1115 aa	Predicted RBP	2.59	□□□□□ -1.99
PAM16	YJL104W	GIS2	P53849	153 aa	Known RBP RIP-Chip data	2.59	□□□□□ -1.99	not detected
PAM16	YJL104W	SHE9	Q04172	456 aa		2.59	□□□□□ -1.99
PAM16	YJL104W	RSC3	Q06639	885 aa		2.59	□□□□□ -1.99
PAM16	YJL104W	CYS3	P31373	394 aa	Known RBP	2.58	□□□□□ -2
PAM16	YJL104W	TOK1	P40310	691 aa		2.58	□□□□□ -2
PAM16	YJL104W	ULP2	P40537	1034 aa	Predicted RBP	2.58	□□□□□ -2
PAM16	YJL104W	GDE1	Q02979	1223 aa		2.58	□□□□□ -2
PAM16	YJL104W	BUL2	Q03758	920 aa	Known RBP	2.58	□□□□□ -2
PAM16	YJL104W	RRP15	Q06511	250 aa	Predicted RBP	2.58	□□□□□ -2
PAM16	YJL104W	GEP3	Q08622	556 aa		2.58	□□□□□ -2
PAM16	YJL104W	PRC1	P00729	532 aa		2.57	□□□□□ -2
PAM16	YJL104W	MVD1	P32377	396 aa	Known RBP	2.57	□□□□□ -2
PAM16	YJL104W	ERT1	P38140	529 aa		2.57	□□□□□ -2
PAM16	YJL104W	SFB3	P38810	929 aa		2.57	□□□□□ -2
PAM16	YJL104W	NOG2	P53742	486 aa	Known RBP	2.57	□□□□□ -2
PAM16	YJL104W	YOR022C	Q12204	715 aa		2.57	□□□□□ -2
PAM16	YJL104W	ECM1	P39715	212 aa		2.56	□□□□□ -2
PAM16	YJL104W	PSA1	P41940	361 aa	Known RBP	2.56	□□□□□ -2
PAM16	YJL104W	TEX1	P53851	422 aa	Known RBP	2.56	□□□□□ -2
PAM16	YJL104W	NEW1	Q08972	1196 aa	Known RBP	2.56	□□□□□ -2
PAM16	YJL104W	ADE5,7	P07244	802 aa	Known RBP	2.55	□□□□□ -2
PAM16	YJL104W	KCC4	P25389	1037 aa		2.55	□□□□□ -2
PAM16	YJL104W	ASF1	P32447	279 aa		2.55	□□□□□ -2
PAM16	YJL104W	MRP8	P35719	219 aa		2.55	□□□□□ -2
PAM16	YJL104W	GMH1	P36125	273 aa		2.55	□□□□□ -2
PAM16	YJL104W	PBY1	P38254	753 aa		2.55	□□□□□ -2
PAM16	YJL104W	NIT3	P49954	291 aa		2.55	□□□□□ -2
PAM16	YJL104W	FHN1	P53279	174 aa		2.55	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 19.9 ms