RNA–Protein interactions for RNA: YJL100W

LSB6, Transcript of Type II phosphatidylinositol 4-kinase, yeastyeast

Gene LSB6, Length 1,824 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSB6YJL100W BAS1P22035 811 aa9.58□□□□□ -0.88
LSB6YJL100W CDC11P32458 415 aa9.58□□□□□ -0.88
LSB6YJL100W PTC3P34221 468 aaKnown RBP9.58□□□□□ -0.88
LSB6YJL100W HEK2P38199 381 aaKnown RBP RIP-Chip data9.58□□□□□ -0.88not detected
LSB6YJL100W TMA22P47089 198 aaPredicted RBP9.58□□□□□ -0.88
LSB6YJL100W ESBP6P53918 673 aa9.58□□□□□ -0.88
LSB6YJL100W PRP3Q03338 469 aaPredicted RBP9.58□□□□□ -0.88
LSB6YJL100W TAF10Q12030 206 aa9.58□□□□□ -0.88
LSB6YJL100W RPB2P08518 1224 aaKnown RBP9.57□□□□□ -0.88
LSB6YJL100W HVG1P0CE11 249 aa9.57□□□□□ -0.88
LSB6YJL100W RAD18P10862 487 aa9.57□□□□□ -0.88
LSB6YJL100W CHS2P14180 963 aa9.57□□□□□ -0.88
LSB6YJL100W CAP1P28495 268 aaKnown RBP9.57□□□□□ -0.88
LSB6YJL100W RAD54P32863 898 aa9.57□□□□□ -0.88
LSB6YJL100W SQT1P35184 431 aa9.57□□□□□ -0.88
LSB6YJL100W NCL1P38205 684 aaKnown RBP9.57□□□□□ -0.88
LSB6YJL100W TDA10P42938 290 aa9.57□□□□□ -0.88
LSB6YJL100W FAR8Q05040 523 aa9.57□□□□□ -0.88
LSB6YJL100W CMS1Q07897 291 aaKnown RBP9.57□□□□□ -0.88
LSB6YJL100W PHR1P05066 565 aaKnown RBP RIP-Chip data9.56□□□□□ -0.88not detected
LSB6YJL100W SWI6P09959 803 aa9.56□□□□□ -0.88
LSB6YJL100W ESS1P22696 170 aa9.56□□□□□ -0.88
LSB6YJL100W VAN1P23642 535 aa9.56□□□□□ -0.88
LSB6YJL100W PUF4P25339 888 aaKnown RBP RIP-Chip data9.56□□□□□ -0.88not detected
LSB6YJL100W YDJ1P25491 409 aaKnown RBP9.56□□□□□ -0.88
LSB6YJL100W RRN6P32786 894 aa9.56□□□□□ -0.88
LSB6YJL100W INA22P40576 216 aa9.56□□□□□ -0.88
LSB6YJL100W FIG4P42837 879 aa9.56□□□□□ -0.88
LSB6YJL100W VID30P53076 958 aa9.56□□□□□ -0.88
LSB6YJL100W SUB1P54000 292 aaKnown RBP9.56□□□□□ -0.88
LSB6YJL100W TFB2Q02939 513 aa9.56□□□□□ -0.88
LSB6YJL100W SLX4Q12098 748 aa9.56□□□□□ -0.88
LSB6YJL100W SRD1P09007 221 aa9.56□□□□□ -0.88
LSB6YJL100W PCK1P10963 549 aa9.56□□□□□ -0.88
LSB6YJL100W YME1P32795 747 aa9.56□□□□□ -0.88
LSB6YJL100W UBP11P36026 717 aa9.56□□□□□ -0.88
LSB6YJL100W MMS21P38632 267 aa9.56□□□□□ -0.88
LSB6YJL100W SAK1P38990 1142 aa9.56□□□□□ -0.88
LSB6YJL100W END3P39013 349 aa9.56□□□□□ -0.88
LSB6YJL100W TIM8P57744 87 aa9.56□□□□□ -0.88
LSB6YJL100W JIP4Q03361 876 aa9.56□□□□□ -0.88
LSB6YJL100W VPS72Q03388 795 aa9.56□□□□□ -0.88
LSB6YJL100W MAG2Q06436 670 aaKnown RBP9.56□□□□□ -0.88
LSB6YJL100W WHI4Q07655 649 aaKnown RBP9.56□□□□□ -0.88
LSB6YJL100W SEC39Q12745 709 aa9.56□□□□□ -0.88
LSB6YJL100W CLN3P13365 580 aa9.55□□□□□ -0.88
LSB6YJL100W PRP22P24384 1145 aaKnown RBP9.55□□□□□ -0.88
LSB6YJL100W ERC1P38767 581 aa9.55□□□□□ -0.88
LSB6YJL100W RSC30P38781 883 aa9.55□□□□□ -0.88
LSB6YJL100W COS5P47187 383 aa9.55□□□□□ -0.88
LSB6YJL100W GTR1Q00582 310 aa9.55□□□□□ -0.88
LSB6YJL100W MTG1Q03151 367 aaPredicted RBP9.55□□□□□ -0.88
LSB6YJL100W UBX5Q06682 500 aa9.55□□□□□ -0.88
LSB6YJL100W OSW1Q08692 278 aa9.55□□□□□ -0.88
LSB6YJL100W CFT2Q12102 859 aaPredicted RBP9.55□□□□□ -0.88
LSB6YJL100W PHO8P11491 566 aa9.54□□□□□ -0.88
LSB6YJL100W CBF1P17106 351 aa9.54□□□□□ -0.88
LSB6YJL100W PEX2P32800 271 aa9.54□□□□□ -0.88
LSB6YJL100W PHO88P38264 188 aaPredicted RBP9.54□□□□□ -0.88
LSB6YJL100W VHC1P38329 1120 aa9.54□□□□□ -0.88
LSB6YJL100W MSG5P38590 489 aa9.54□□□□□ -0.88
LSB6YJL100W SSP1P38871 571 aa9.54□□□□□ -0.88
LSB6YJL100W RPN3P40016 523 aaKnown RBP9.54□□□□□ -0.88
LSB6YJL100W PSY2P40164 858 aa9.54□□□□□ -0.88
LSB6YJL100W GPD2P41911 440 aaKnown RBP9.54□□□□□ -0.88
LSB6YJL100W ZIP2P53061 704 aa9.54□□□□□ -0.88
LSB6YJL100W VPS16Q03308 798 aa9.54□□□□□ -0.88
LSB6YJL100W CST9Q06032 482 aa9.54□□□□□ -0.88
LSB6YJL100W VMA2P16140 517 aaKnown RBP9.54□□□□□ -0.88
LSB6YJL100W UGA4P32837 571 aa9.54□□□□□ -0.88
LSB6YJL100W RAD5P32849 1169 aaPredicted RBP9.54□□□□□ -0.88
LSB6YJL100W TFC4P33339 1025 aa9.54□□□□□ -0.88
LSB6YJL100W ILM1P47155 203 aa9.54□□□□□ -0.88
LSB6YJL100W YGL039WP53183 348 aaKnown RBP9.54□□□□□ -0.88
LSB6YJL100W YAF9P53930 226 aa9.54□□□□□ -0.88
LSB6YJL100W SPC24Q04477 213 aa9.54□□□□□ -0.88
LSB6YJL100W ALR1Q08269 859 aa9.54□□□□□ -0.88
LSB6YJL100W HIF1Q12373 385 aa9.54□□□□□ -0.88
LSB6YJL100W YDL206WQ12424 762 aa9.54□□□□□ -0.88
LSB6YJL100W PEP5P12868 1029 aa9.53□□□□□ -0.88
LSB6YJL100W KIP1P28742 1111 aa9.53□□□□□ -0.88
LSB6YJL100W PGM1P33401 570 aaKnown RBP9.53□□□□□ -0.88
LSB6YJL100W APE3P37302 537 aaKnown RBP9.53□□□□□ -0.88
LSB6YJL100W YBP1P38315 674 aa9.53□□□□□ -0.88
LSB6YJL100W CLA4P48562 842 aa9.53□□□□□ -0.88
LSB6YJL100W CTR1P49573 406 aa9.53□□□□□ -0.88
LSB6YJL100W ALD6P54115 500 aaKnown RBP9.53□□□□□ -0.88
LSB6YJL100W CDC33P07260 213 aaKnown RBP9.52□□□□□ -0.89
LSB6YJL100W YMR085WP0CF18 432 aa9.52□□□□□ -0.89
LSB6YJL100W SPO16P17122 198 aa9.52□□□□□ -0.89
LSB6YJL100W MVD1P32377 396 aaKnown RBP9.52□□□□□ -0.89
LSB6YJL100W EUG1P32474 517 aa9.52□□□□□ -0.89
LSB6YJL100W RIO2P40160 425 aaKnown RBP9.52□□□□□ -0.89
LSB6YJL100W VPS70P47161 811 aa9.52□□□□□ -0.89
LSB6YJL100W YNL040WP53960 456 aaPredicted RBP9.52□□□□□ -0.89
LSB6YJL100W LCB5Q06147 687 aaKnown RBP9.52□□□□□ -0.89
LSB6YJL100W RLP24Q07915 199 aaKnown RBP9.52□□□□□ -0.89
LSB6YJL100W NCR1Q12200 1170 aa9.52□□□□□ -0.89
LSB6YJL100W SNF1P06782 633 aaKnown RBP9.52□□□□□ -0.89
LSB6YJL100W SAM1P10659 382 aaKnown RBP9.52□□□□□ -0.89
Retrieved 100 of 5,963 RNA–protein pairs in 8.6 ms