RNA–Protein interactions for RNA: YHR050W

SMF2, Transcript of Divalent metal ion transporter involved in manganese homeostasis, yeastyeast

Gene SMF2, Length 1,650 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMF2YHR050W SPH1Q06160 661 aa6.09□□□□□ -1.43
SMF2YHR050W CSR1Q06705 408 aaKnown RBP6.09□□□□□ -1.43
SMF2YHR050W YPR015CQ12531 247 aa6.09□□□□□ -1.43
SMF2YHR050W FBP1P09201 348 aa6.08□□□□□ -1.44
SMF2YHR050W DBP5P20449 482 aaKnown RBP6.08□□□□□ -1.44
SMF2YHR050W PER1P25625 357 aa6.08□□□□□ -1.44
SMF2YHR050W RTG2P32608 588 aaKnown RBP6.08□□□□□ -1.44
SMF2YHR050W GCG1P32656 232 aaKnown RBP6.08□□□□□ -1.44
SMF2YHR050W OLA1P38219 394 aaKnown RBP6.08□□□□□ -1.44
SMF2YHR050W ESBP6P53918 673 aa6.08□□□□□ -1.44
SMF2YHR050W ARK1P53974 638 aa6.08□□□□□ -1.44
SMF2YHR050W PTA1Q01329 785 aaPredicted RBP6.08□□□□□ -1.44
SMF2YHR050W SYH1Q02875 849 aaKnown RBP6.08□□□□□ -1.44
SMF2YHR050W YML082WQ04533 649 aaKnown RBP6.08□□□□□ -1.44
SMF2YHR050W CRD1Q07560 283 aa6.08□□□□□ -1.44
SMF2YHR050W TFB4Q12004 338 aa6.08□□□□□ -1.44
SMF2YHR050W ZRT2Q12436 422 aa6.08□□□□□ -1.44
SMF2YHR050W ERG11P10614 530 aa6.07□□□□□ -1.44
SMF2YHR050W YSC83P32792 385 aa6.07□□□□□ -1.44
SMF2YHR050W ATG19P35193 415 aa6.07□□□□□ -1.44
SMF2YHR050W MCR1P36060 302 aaKnown RBP6.07□□□□□ -1.44
SMF2YHR050W YKR018CP36114 725 aa6.07□□□□□ -1.44
SMF2YHR050W YSW1P38280 609 aa6.07□□□□□ -1.44
SMF2YHR050W RIO2P40160 425 aaKnown RBP6.07□□□□□ -1.44
SMF2YHR050W LCB2P40970 561 aa6.07□□□□□ -1.44
SMF2YHR050W PXA1P41909 870 aa6.07□□□□□ -1.44
SMF2YHR050W YJL007CP47080 104 aa6.07□□□□□ -1.44
SMF2YHR050W JJJ1P53863 590 aa6.07□□□□□ -1.44
SMF2YHR050W TIM8P57744 87 aa6.07□□□□□ -1.44
SMF2YHR050W URH1Q04179 340 aa6.07□□□□□ -1.44
SMF2YHR050W STE23Q06010 1027 aa6.07□□□□□ -1.44
SMF2YHR050W UBX5Q06682 500 aa6.07□□□□□ -1.44
SMF2YHR050W APL5Q08951 932 aaKnown RBP6.07□□□□□ -1.44
SMF2YHR050W YRR1Q12172 810 aa6.07□□□□□ -1.44
SMF2YHR050W SNF1P06782 633 aaKnown RBP6.07□□□□□ -1.44
SMF2YHR050W PRP16P15938 1071 aaPredicted RBP6.07□□□□□ -1.44
SMF2YHR050W VPS35P34110 944 aa6.07□□□□□ -1.44
SMF2YHR050W BLI1P35727 113 aa6.07□□□□□ -1.44
SMF2YHR050W MCD4P36051 919 aa6.07□□□□□ -1.44
SMF2YHR050W PTC2P39966 464 aaKnown RBP6.07□□□□□ -1.44
SMF2YHR050W VAB2P40003 282 aa6.07□□□□□ -1.44
SMF2YHR050W PSY2P40164 858 aa6.07□□□□□ -1.44
SMF2YHR050W RPC17P47076 161 aa6.07□□□□□ -1.44
SMF2YHR050W UBP3Q01477 912 aaKnown RBP RIP-Chip data6.07□□□□□ -1.44 RIP-Chip
SMF2YHR050W YMR018WQ04364 514 aa6.07□□□□□ -1.44
SMF2YHR050W SVF1Q05515 481 aa6.07□□□□□ -1.44
SMF2YHR050W DON1Q05610 365 aa6.07□□□□□ -1.44
SMF2YHR050W ECI1Q05871 280 aa6.07□□□□□ -1.44
SMF2YHR050W ISA1Q07821 250 aaPredicted RBP6.07□□□□□ -1.44
SMF2YHR050W SEC39Q12745 709 aa6.07□□□□□ -1.44
SMF2YHR050W YLR278CQ05854 1341 aa6.06□□□□□ -1.44
SMF2YHR050W THS1P04801 734 aaKnown RBP6.06□□□□□ -1.44
SMF2YHR050W RAD1P06777 1100 aa6.06□□□□□ -1.44
SMF2YHR050W UBC6P33296 250 aaPredicted RBP6.06□□□□□ -1.44
SMF2YHR050W BCK2P33306 851 aa6.06□□□□□ -1.44
SMF2YHR050W VRP1P37370 817 aa6.06□□□□□ -1.44
SMF2YHR050W SPP381P38282 291 aaPredicted RBP6.06□□□□□ -1.44
SMF2YHR050W TRS85P46944 698 aa6.06□□□□□ -1.44
SMF2YHR050W PEX21P50091 288 aa6.06□□□□□ -1.44
SMF2YHR050W DIG1Q03063 452 aaKnown RBP6.06□□□□□ -1.44
SMF2YHR050W YDR338CQ05497 695 aa6.06□□□□□ -1.44
SMF2YHR050W DUS3Q06053 668 aaKnown RBP6.06□□□□□ -1.44
SMF2YHR050W RIO1Q12196 484 aaKnown RBP6.06□□□□□ -1.44
SMF2YHR050W PUS1Q12211 544 aaKnown RBP6.06□□□□□ -1.44
SMF2YHR050W CDC48P25694 835 aaKnown RBP6.05□□□□□ -1.44
SMF2YHR050W KIP1P28742 1111 aa6.05□□□□□ -1.44
SMF2YHR050W NAM7P30771 971 aaKnown RBP6.05□□□□□ -1.44
SMF2YHR050W SHP1P34223 423 aa6.05□□□□□ -1.44
SMF2YHR050W YKL050CP35736 922 aa6.05□□□□□ -1.44
SMF2YHR050W LAS1P36146 502 aaPredicted RBP6.05□□□□□ -1.44
SMF2YHR050W RCK2P38623 610 aa6.05□□□□□ -1.44
SMF2YHR050W YGL039WP53183 348 aaKnown RBP6.05□□□□□ -1.44
SMF2YHR050W EEB1Q02891 456 aa6.05□□□□□ -1.44
SMF2YHR050W YPR109WQ06104 294 aa6.05□□□□□ -1.44
SMF2YHR050W CDC33P07260 213 aaKnown RBP6.04□□□□□ -1.44
SMF2YHR050W YDJ1P25491 409 aaKnown RBP6.04□□□□□ -1.44
SMF2YHR050W SEC21P32074 935 aaKnown RBP6.04□□□□□ -1.44
SMF2YHR050W MUD1P32605 298 aaKnown RBP6.04□□□□□ -1.44
SMF2YHR050W UTR4P32626 227 aa6.04□□□□□ -1.44
SMF2YHR050W COT1P32798 439 aa6.04□□□□□ -1.44
SMF2YHR050W SPC72P39723 622 aa6.04□□□□□ -1.44
SMF2YHR050W HMF1P40037 129 aaKnown RBP6.04□□□□□ -1.44
SMF2YHR050W CTR1P49573 406 aa6.04□□□□□ -1.44
SMF2YHR050W TAM41P53230 385 aa6.04□□□□□ -1.44
SMF2YHR050W SMC5Q08204 1093 aa6.04□□□□□ -1.44
SMF2YHR050W SPO21Q12411 609 aa6.04□□□□□ -1.44
SMF2YHR050W VMA2P16140 517 aaKnown RBP6.04□□□□□ -1.44
SMF2YHR050W PRE10P21242 288 aaKnown RBP RIP-Chip data6.04□□□□□ -1.44not detected
SMF2YHR050W SSD1P24276 1250 aaKnown RBP RIP-Chip data6.04□□□□□ -1.44not detected
SMF2YHR050W PDB1P32473 366 aaKnown RBP6.04□□□□□ -1.44
SMF2YHR050W TRZ1P36159 838 aaPredicted RBP6.04□□□□□ -1.44
SMF2YHR050W EXO5P38289 585 aa6.04□□□□□ -1.44
SMF2YHR050W ERC1P38767 581 aa6.04□□□□□ -1.44
SMF2YHR050W PEA2P40091 420 aa6.04□□□□□ -1.44
SMF2YHR050W VPS53P47061 822 aa6.04□□□□□ -1.44
SMF2YHR050W UBP15P50101 1230 aa6.04□□□□□ -1.44
SMF2YHR050W YAF9P53930 226 aa6.04□□□□□ -1.44
SMF2YHR050W CWC15Q03772 175 aaKnown RBP6.04□□□□□ -1.44
SMF2YHR050W NOC3Q07896 663 aaPredicted RBP6.04□□□□□ -1.44
SMF2YHR050W SDH5Q08230 162 aa6.04□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 79 ms