RNA–Protein interactions for RNA: YHR003C

TCD1, Transcript of tRNA threonylcarbamoyladenosine dehydratase, yeastyeast

Gene TCD1, Length 1,290 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TCD1YHR003C BET3P36149 193 aa3.7□□□□□ -1.82
TCD1YHR003C PUS2P53167 370 aa3.7□□□□□ -1.82
TCD1YHR003C RTS3P53289 263 aa3.7□□□□□ -1.82
TCD1YHR003C YOL098CQ12496 1037 aa3.7□□□□□ -1.82
TCD1YHR003C TRP4P07285 380 aaPredicted RBP3.69□□□□□ -1.82
TCD1YHR003C CYS3P31373 394 aaKnown RBP3.69□□□□□ -1.82
TCD1YHR003C SEC21P32074 935 aaKnown RBP3.69□□□□□ -1.82
TCD1YHR003C EFT1P32324 842 aaKnown RBP3.69□□□□□ -1.82
TCD1YHR003C YHR078WP38799 552 aa3.69□□□□□ -1.82
TCD1YHR003C ALG2P43636 503 aa3.69□□□□□ -1.82
TCD1YHR003C YGR283CP53336 341 aaPredicted RBP3.69□□□□□ -1.82
TCD1YHR003C SUB1P54000 292 aaKnown RBP3.69□□□□□ -1.82
TCD1YHR003C CTF4Q01454 927 aa3.69□□□□□ -1.82
TCD1YHR003C KIN4Q01919 800 aa3.69□□□□□ -1.82
TCD1YHR003C PEX19Q07418 342 aa3.69□□□□□ -1.82
TCD1YHR003C SWM1Q12379 170 aa3.69□□□□□ -1.82
TCD1YHR003C YOR131CQ12486 218 aa3.69□□□□□ -1.82
TCD1YHR003C DAL7P21826 554 aa3.68□□□□□ -1.82
TCD1YHR003C SWE1P32944 819 aa3.68□□□□□ -1.82
TCD1YHR003C KTR4P38131 464 aa3.68□□□□□ -1.82
TCD1YHR003C CHS7P38843 316 aa3.68□□□□□ -1.82
TCD1YHR003C CHZ1P40019 153 aaPredicted RBP3.68□□□□□ -1.82
TCD1YHR003C BUL1P48524 976 aa3.68□□□□□ -1.82
TCD1YHR003C RTA1P53047 317 aa3.68□□□□□ -1.82
TCD1YHR003C SLI1P53304 468 aa3.68□□□□□ -1.82
TCD1YHR003C SLU7Q02775 382 aaKnown RBP3.68□□□□□ -1.82
TCD1YHR003C REH1Q06709 432 aa3.68□□□□□ -1.82
TCD1YHR003C YRF1-1P0CX20 1796 aa3.68□□□□□ -1.82
TCD1YHR003C YRF1-5P0CX21 1796 aa3.68□□□□□ -1.82
TCD1YHR003C YRF1-8P0CX22 1796 aa3.68□□□□□ -1.82
TCD1YHR003C ERG4P25340 473 aa3.67□□□□□ -1.82
TCD1YHR003C SRP40P32583 406 aaPredicted RBP3.67□□□□□ -1.82
TCD1YHR003C CTF13P35203 478 aa3.67□□□□□ -1.82
TCD1YHR003C GYP8P43570 497 aa3.67□□□□□ -1.82
TCD1YHR003C OSW7P43611 510 aa3.67□□□□□ -1.82
TCD1YHR003C TAD1P53065 400 aa3.67□□□□□ -1.82
TCD1YHR003C DUS1P53759 423 aaKnown RBP3.67□□□□□ -1.82
TCD1YHR003C ATP25Q03153 612 aa3.67□□□□□ -1.82
TCD1YHR003C YDR514CQ04408 483 aa3.67□□□□□ -1.82
TCD1YHR003C TRM11Q12463 433 aa3.67□□□□□ -1.82
TCD1YHR003C NTE1Q04958 1679 aa3.67□□□□□ -1.82
TCD1YHR003C TY1B-BRQ12193 1756 aa3.66□□□□□ -1.82
TCD1YHR003C TY1B-GR3Q12316 1755 aa3.66□□□□□ -1.82
TCD1YHR003C TY1B-ORQ92393 1755 aa3.66□□□□□ -1.82
TCD1YHR003C PHR1P05066 565 aaKnown RBP RIP-Chip data3.66□□□□□ -1.82not detected
TCD1YHR003C TUB3P09734 445 aaKnown RBP3.66□□□□□ -1.82
TCD1YHR003C SUL1P38359 859 aa3.66□□□□□ -1.82
TCD1YHR003C ERG5P54781 538 aa3.66□□□□□ -1.82
TCD1YHR003C VPS72Q03388 795 aa3.66□□□□□ -1.82
TCD1YHR003C RPN4Q03465 531 aa3.66□□□□□ -1.82
TCD1YHR003C YLR040CQ07988 224 aa3.66□□□□□ -1.82
TCD1YHR003C HAL9Q12180 1030 aa3.66□□□□□ -1.82
TCD1YHR003C YOR022CQ12204 715 aa3.66□□□□□ -1.82
TCD1YHR003C PDR15Q04182 1529 aaKnown RBP3.65□□□□□ -1.82
TCD1YHR003C PRC1P00729 532 aa3.65□□□□□ -1.83
TCD1YHR003C NGG1P32494 702 aa3.65□□□□□ -1.83
TCD1YHR003C SPC29P33419 253 aa3.65□□□□□ -1.83
TCD1YHR003C SAP190P36123 1033 aa3.65□□□□□ -1.83
TCD1YHR003C PZF1P39933 429 aa3.65□□□□□ -1.83
TCD1YHR003C RNH70P53331 553 aa3.65□□□□□ -1.83
TCD1YHR003C ASI2P53895 289 aa3.65□□□□□ -1.83
TCD1YHR003C LRS4Q04087 347 aaKnown RBP3.65□□□□□ -1.83
TCD1YHR003C YOL073CQ08232 322 aa3.65□□□□□ -1.83
TCD1YHR003C PPM2Q08282 695 aa3.65□□□□□ -1.83
TCD1YHR003C PAN1P32521 1480 aa3.65□□□□□ -1.83
TCD1YHR003C YPK9Q12697 1472 aa3.65□□□□□ -1.83
TCD1YHR003C YCL002CP25565 263 aa3.64□□□□□ -1.83
TCD1YHR003C YKL091CP33324 310 aaKnown RBP3.64□□□□□ -1.83
TCD1YHR003C TOM20P35180 183 aa3.64□□□□□ -1.83
TCD1YHR003C SET5P38890 526 aaKnown RBP3.64□□□□□ -1.83
TCD1YHR003C VHR1P40522 640 aa3.64□□□□□ -1.83
TCD1YHR003C SSY5P47002 699 aa3.64□□□□□ -1.83
TCD1YHR003C ZDS1P50111 915 aaKnown RBP3.64□□□□□ -1.83
TCD1YHR003C RNT1Q02555 471 aa3.64□□□□□ -1.83
TCD1YHR003C PKH1Q03407 766 aa3.64□□□□□ -1.83
TCD1YHR003C MET7Q08645 548 aa3.64□□□□□ -1.83
TCD1YHR003C VPS15P22219 1454 aa3.64□□□□□ -1.83
TCD1YHR003C MET3P08536 511 aa3.63□□□□□ -1.83
TCD1YHR003C RAD53P22216 821 aa3.63□□□□□ -1.83
TCD1YHR003C OAR1P35731 278 aa3.63□□□□□ -1.83
TCD1YHR003C RPP1P38786 293 aa3.63□□□□□ -1.83
TCD1YHR003C FPR3P38911 411 aaKnown RBP3.63□□□□□ -1.83
TCD1YHR003C GDH3P39708 457 aa3.63□□□□□ -1.83
TCD1YHR003C YJR008WP47085 338 aa3.63□□□□□ -1.83
TCD1YHR003C MUS81Q04149 632 aaPredicted RBP3.63□□□□□ -1.83
TCD1YHR003C DLT1Q04216 342 aa3.63□□□□□ -1.83
TCD1YHR003C RSC3Q06639 885 aa3.63□□□□□ -1.83
TCD1YHR003C THI21Q08975 551 aa3.63□□□□□ -1.83
TCD1YHR003C DIF1O13577 133 aa3.62□□□□□ -1.83
TCD1YHR003C PPR1P07272 904 aaPredicted RBP3.62□□□□□ -1.83
TCD1YHR003C ALG7P07286 448 aa3.62□□□□□ -1.83
TCD1YHR003C PRP4P20053 465 aaKnown RBP3.62□□□□□ -1.83
TCD1YHR003C RRP14P36080 434 aaKnown RBP3.62□□□□□ -1.83
TCD1YHR003C SAK1P38990 1142 aa3.62□□□□□ -1.83
TCD1YHR003C RLP7P40693 322 aaKnown RBP3.62□□□□□ -1.83
TCD1YHR003C BUD6P41697 788 aa3.62□□□□□ -1.83
TCD1YHR003C SHR5P41912 237 aa3.62□□□□□ -1.83
TCD1YHR003C HXT16P47185 567 aa3.62□□□□□ -1.83
TCD1YHR003C HSV2P50079 448 aaPredicted RBP3.62□□□□□ -1.83
TCD1YHR003C YBR182C-AQ8TGU6 64 aa3.62□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 130.6 ms