RNA–Protein interactions for RNA: YGR253C

PUP2, Transcript of Alpha 5 subunit of the 20S proteasome, yeastyeast

Gene PUP2, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP2YGR253C UBP5P39944 805 aa7.99□□□□□ -1.13
PUP2YGR253C ASN1P49089 572 aaKnown RBP7.99□□□□□ -1.13
PUP2YGR253C SFB2P53953 876 aa7.99□□□□□ -1.13
PUP2YGR253C SEC5P89102 971 aa7.99□□□□□ -1.13
PUP2YGR253C SNU56Q03782 492 aaKnown RBP7.99□□□□□ -1.13
PUP2YGR253C YDL057WQ07379 328 aa7.99□□□□□ -1.13
PUP2YGR253C NSE1Q07913 336 aa7.99□□□□□ -1.13
PUP2YGR253C CTF3Q12748 733 aa7.99□□□□□ -1.13
PUP2YGR253C SEN1Q00416 2231 aaKnown RBP7.98□□□□□ -1.13
PUP2YGR253C CPA2P03965 1118 aaKnown RBP7.98□□□□□ -1.13
PUP2YGR253C RPS14AP06367 137 aaKnown RBP7.98□□□□□ -1.13
PUP2YGR253C PCK1P10963 549 aa7.98□□□□□ -1.13
PUP2YGR253C SSB1P11484 613 aaKnown RBP7.98□□□□□ -1.13
PUP2YGR253C VPS3P23643 1011 aa7.98□□□□□ -1.13
PUP2YGR253C RGD1P38339 666 aa7.98□□□□□ -1.13
PUP2YGR253C RPS14BP39516 138 aaKnown RBP7.98□□□□□ -1.13
PUP2YGR253C SSB2P40150 613 aaKnown RBP7.98□□□□□ -1.13
PUP2YGR253C VTC2P43585 828 aa7.98□□□□□ -1.13
PUP2YGR253C POL31P46957 487 aa7.98□□□□□ -1.13
PUP2YGR253C ZAP1P47043 880 aa7.98□□□□□ -1.13
PUP2YGR253C BFA1P47113 574 aa7.98□□□□□ -1.13
PUP2YGR253C YHM2Q04013 314 aa7.98□□□□□ -1.13
PUP2YGR253C UTP14Q04500 899 aaKnown RBP7.98□□□□□ -1.13
PUP2YGR253C LEA1Q08963 238 aaPredicted RBP7.98□□□□□ -1.13
PUP2YGR253C APM4Q99186 491 aa7.98□□□□□ -1.13
PUP2YGR253C FOB1O13329 566 aa7.97□□□□□ -1.13
PUP2YGR253C MST1P07236 462 aa7.97□□□□□ -1.13
PUP2YGR253C PGI1P12709 554 aaKnown RBP7.97□□□□□ -1.13
PUP2YGR253C RGP1P16664 663 aa7.97□□□□□ -1.13
PUP2YGR253C TTI1P36097 1038 aa7.97□□□□□ -1.13
PUP2YGR253C DAK2P43550 591 aa7.97□□□□□ -1.13
PUP2YGR253C FYV8P46949 817 aaKnown RBP7.97□□□□□ -1.13
PUP2YGR253C FAA4P47912 694 aaKnown RBP7.97□□□□□ -1.13
PUP2YGR253C FAR11P53917 953 aa7.97□□□□□ -1.13
PUP2YGR253C MFB1Q04922 465 aa7.97□□□□□ -1.13
PUP2YGR253C CDD1Q06549 142 aa7.97□□□□□ -1.13
PUP2YGR253C YPL277CQ08989 487 aa7.97□□□□□ -1.13
PUP2YGR253C CDC53Q12018 815 aaKnown RBP7.97□□□□□ -1.13
PUP2YGR253C YPL150WQ12152 901 aa7.97□□□□□ -1.13
PUP2YGR253C MEX67Q99257 599 aaKnown RBP7.97□□□□□ -1.13
PUP2YGR253C LAA1P39526 2014 aa7.96□□□□□ -1.13
PUP2YGR253C ASP3-2P0CX77 362 aa7.96□□□□□ -1.14
PUP2YGR253C ASP3-3P0CX78 362 aa7.96□□□□□ -1.14
PUP2YGR253C ASP3-4P0CX79 362 aa7.96□□□□□ -1.14
PUP2YGR253C ASP3-1P0CZ17 362 aa7.96□□□□□ -1.14
PUP2YGR253C PHO8P11491 566 aa7.96□□□□□ -1.14
PUP2YGR253C FUS1P11710 512 aa7.96□□□□□ -1.14
PUP2YGR253C URA1P28272 314 aaPredicted RBP7.96□□□□□ -1.14
PUP2YGR253C YHR054CP38780 354 aa7.96□□□□□ -1.14
PUP2YGR253C YFL034WP43564 1073 aa7.96□□□□□ -1.14
PUP2YGR253C TAF1P46677 1066 aa7.96□□□□□ -1.14
PUP2YGR253C CUE3P53137 624 aaKnown RBP7.96□□□□□ -1.14
PUP2YGR253C PEX19Q07418 342 aa7.96□□□□□ -1.14
PUP2YGR253C HIS4P00815 799 aaKnown RBP7.95□□□□□ -1.14
PUP2YGR253C PEP7P32609 515 aa7.95□□□□□ -1.14
PUP2YGR253C YEL1P34225 687 aa7.95□□□□□ -1.14
PUP2YGR253C POL12P38121 705 aaPredicted RBP7.95□□□□□ -1.14
PUP2YGR253C ATH1P48016 1211 aa7.95□□□□□ -1.14
PUP2YGR253C COG8Q04632 607 aa7.95□□□□□ -1.14
PUP2YGR253C HRT3Q12347 344 aa7.95□□□□□ -1.14
PUP2YGR253C PDH1Q12428 516 aaKnown RBP7.95□□□□□ -1.14
PUP2YGR253C RPL40AP0CH08 128 aaKnown RBP7.94□□□□□ -1.14
PUP2YGR253C RPL40BP0CH09 128 aaKnown RBP7.94□□□□□ -1.14
PUP2YGR253C DAL7P21826 554 aa7.94□□□□□ -1.14
PUP2YGR253C MCM3P24279 971 aaKnown RBP7.94□□□□□ -1.14
PUP2YGR253C ECM32P32644 1121 aaKnown RBP7.94□□□□□ -1.14
PUP2YGR253C SLA2P33338 968 aa7.94□□□□□ -1.14
PUP2YGR253C TBS1P38114 1094 aa7.94□□□□□ -1.14
PUP2YGR253C DUG2P38149 878 aa7.94□□□□□ -1.14
PUP2YGR253C MED6P38782 295 aa7.94□□□□□ -1.14
PUP2YGR253C HSH155P49955 971 aaKnown RBP7.94□□□□□ -1.14
PUP2YGR253C PSP1P50896 841 aaKnown RBP7.94□□□□□ -1.14
PUP2YGR253C YNR061CP53747 219 aa7.94□□□□□ -1.14
PUP2YGR253C CAF120P53836 1060 aa7.94□□□□□ -1.14
PUP2YGR253C TIF35Q04067 274 aaKnown RBP7.94□□□□□ -1.14
PUP2YGR253C YML053CQ04978 212 aa7.94□□□□□ -1.14
PUP2YGR253C SPE3Q12074 293 aaKnown RBP7.94□□□□□ -1.14
PUP2YGR253C SGT2Q12118 346 aaKnown RBP7.94□□□□□ -1.14
PUP2YGR253C FMP27Q06179 2628 aa7.93□□□□□ -1.14
PUP2YGR253C MUD1P32605 298 aaKnown RBP7.93□□□□□ -1.14
PUP2YGR253C MAL33P38157 468 aa7.93□□□□□ -1.14
PUP2YGR253C SIF2P38262 535 aa7.93□□□□□ -1.14
PUP2YGR253C SFB3P38810 929 aa7.93□□□□□ -1.14
PUP2YGR253C NPP2P39997 493 aa7.93□□□□□ -1.14
PUP2YGR253C VPS25P47142 202 aa7.93□□□□□ -1.14
PUP2YGR253C CCM1P48237 864 aaPredicted RBP7.93□□□□□ -1.14
PUP2YGR253C NOP13P53883 403 aaKnown RBP RIP-Chip data7.93□□□□□ -1.14not detected
PUP2YGR253C PSR2Q07949 397 aa7.93□□□□□ -1.14
PUP2YGR253C RPS9AO13516 197 aaKnown RBP7.92□□□□□ -1.14
PUP2YGR253C HOM2P13663 365 aaKnown RBP7.92□□□□□ -1.14
PUP2YGR253C VMA1P17255 1071 aaKnown RBP7.92□□□□□ -1.14
PUP2YGR253C SIR1P21691 654 aa7.92□□□□□ -1.14
PUP2YGR253C STE11P23561 717 aa7.92□□□□□ -1.14
PUP2YGR253C FMO1P38866 432 aa7.92□□□□□ -1.14
PUP2YGR253C BIM1P40013 344 aa7.92□□□□□ -1.14
PUP2YGR253C NBP1P52919 319 aaPredicted RBP7.92□□□□□ -1.14
PUP2YGR253C HER2Q03557 464 aa7.92□□□□□ -1.14
PUP2YGR253C TAF10Q12030 206 aa7.92□□□□□ -1.14
PUP2YGR253C TPK1P06244 397 aa7.91□□□□□ -1.14
PUP2YGR253C MRM1P25270 412 aa7.91□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 45.9 ms