RNA–Protein interactions for RNA: YGL248W

PDE1, Transcript of Low-affinity cyclic AMP phosphodiesterase, yeastyeast

Gene PDE1, Length 1,110 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDE1YGL248W GSF2Q04697 403 aaKnown RBP5.83□□□□□ -1.48
PDE1YGL248W GAD1Q04792 585 aa5.83□□□□□ -1.48
PDE1YGL248W BSC2Q05611 235 aa5.83□□□□□ -1.48
PDE1YGL248W ARV1Q06541 321 aa5.83□□□□□ -1.48
PDE1YGL248W PCL8Q08966 492 aa5.83□□□□□ -1.48
PDE1YGL248W MDM12Q92328 271 aa5.83□□□□□ -1.48
PDE1YGL248W GCR1P07261 785 aa5.82□□□□□ -1.48
PDE1YGL248W SAN1P22470 610 aa5.82□□□□□ -1.48
PDE1YGL248W MCM3P24279 971 aaKnown RBP5.82□□□□□ -1.48
PDE1YGL248W SRO9P25567 434 aaKnown RBP5.82□□□□□ -1.48
PDE1YGL248W SWC3P31376 625 aa5.82□□□□□ -1.48
PDE1YGL248W SMY1P32364 656 aaKnown RBP5.82□□□□□ -1.48
PDE1YGL248W ORC2P32833 620 aa5.82□□□□□ -1.48
PDE1YGL248W SMC1P32908 1225 aa5.82□□□□□ -1.48
PDE1YGL248W VBA5P36172 582 aa5.82□□□□□ -1.48
PDE1YGL248W OTU2P38747 307 aaKnown RBP5.82□□□□□ -1.48
PDE1YGL248W PAN5P38787 379 aa5.82□□□□□ -1.48
PDE1YGL248W NOP16P40007 231 aaKnown RBP5.82□□□□□ -1.48
PDE1YGL248W SPO74P45819 413 aa5.82□□□□□ -1.48
PDE1YGL248W PFD1P46988 109 aa5.82□□□□□ -1.48
PDE1YGL248W ENT3P47160 408 aa5.82□□□□□ -1.48
PDE1YGL248W RNR4P49723 345 aaKnown RBP5.82□□□□□ -1.48
PDE1YGL248W GUP1P53154 560 aa5.82□□□□□ -1.48
PDE1YGL248W EEB1Q02891 456 aa5.82□□□□□ -1.48
PDE1YGL248W TAF11Q04226 346 aa5.82□□□□□ -1.48
PDE1YGL248W ATG38Q05789 226 aaKnown RBP5.82□□□□□ -1.48
PDE1YGL248W YCS4Q06156 1176 aa5.82□□□□□ -1.48
PDE1YGL248W DBP9Q06218 594 aaKnown RBP5.82□□□□□ -1.48
PDE1YGL248W EMG1Q06287 252 aaKnown RBP5.82□□□□□ -1.48
PDE1YGL248W PRP9P19736 530 aaKnown RBP5.81□□□□□ -1.48
PDE1YGL248W POL4P25615 582 aa5.81□□□□□ -1.48
PDE1YGL248W NAM7P30771 971 aaKnown RBP5.81□□□□□ -1.48
PDE1YGL248W LYP1P32487 611 aa5.81□□□□□ -1.48
PDE1YGL248W PRP40P33203 583 aaKnown RBP5.81□□□□□ -1.48
PDE1YGL248W RIB7P33312 244 aa5.81□□□□□ -1.48
PDE1YGL248W SPC29P33419 253 aa5.81□□□□□ -1.48
PDE1YGL248W SKI2P35207 1287 aaKnown RBP RIP-Chip data5.81□□□□□ -1.48not detected
PDE1YGL248W PSY4P38193 441 aa5.81□□□□□ -1.48
PDE1YGL248W FUN12P39730 1002 aaKnown RBP5.81□□□□□ -1.48
PDE1YGL248W RAD26P40352 1085 aa5.81□□□□□ -1.48
PDE1YGL248W SEC26P41810 973 aaKnown RBP5.81□□□□□ -1.48
PDE1YGL248W ALR2P43553 858 aa5.81□□□□□ -1.48
PDE1YGL248W LAM5P43560 674 aa5.81□□□□□ -1.48
PDE1YGL248W NIT2P47016 307 aa5.81□□□□□ -1.48
PDE1YGL248W AVT1P47082 602 aa5.81□□□□□ -1.48
PDE1YGL248W SUT1P53032 299 aaKnown RBP5.81□□□□□ -1.48
PDE1YGL248W YKU80Q04437 629 aa5.81□□□□□ -1.48
PDE1YGL248W EIS1Q05050 843 aaKnown RBP5.81□□□□□ -1.48
PDE1YGL248W PUF3Q07807 879 aaKnown RBP RIP-Chip data5.81□□□□□ -1.48not detected
PDE1YGL248W APL4Q12028 832 aa5.81□□□□□ -1.48
PDE1YGL248W RRP36Q12481 300 aaPredicted RBP5.81□□□□□ -1.48
PDE1YGL248W YMR084WA2P2R3 262 aa5.8□□□□□ -1.48
PDE1YGL248W PDX1P16451 410 aa5.8□□□□□ -1.48
PDE1YGL248W RPB4P20433 221 aaPredicted RBP5.8□□□□□ -1.48
PDE1YGL248W RPL5P26321 297 aaKnown RBP5.8□□□□□ -1.48
PDE1YGL248W MKK2P32491 506 aa5.8□□□□□ -1.48
PDE1YGL248W RPN2P32565 945 aaKnown RBP5.8□□□□□ -1.48
PDE1YGL248W MCM7P38132 845 aa5.8□□□□□ -1.48
PDE1YGL248W ETP1P38748 585 aaKnown RBP5.8□□□□□ -1.48
PDE1YGL248W YHR131CP38835 850 aa5.8□□□□□ -1.48
PDE1YGL248W AIM46P38885 310 aa5.8□□□□□ -1.48
PDE1YGL248W SPC72P39723 622 aa5.8□□□□□ -1.48
PDE1YGL248W PSY2P40164 858 aa5.8□□□□□ -1.48
PDE1YGL248W AXL1P40851 1208 aa5.8□□□□□ -1.48
PDE1YGL248W GCD10P41814 478 aa5.8□□□□□ -1.48
PDE1YGL248W LEM3P42838 414 aa5.8□□□□□ -1.48
PDE1YGL248W IRC6P43615 237 aa5.8□□□□□ -1.48
PDE1YGL248W MNP1P53163 194 aaPredicted RBP5.8□□□□□ -1.48
PDE1YGL248W BIO5P53744 561 aaKnown RBP5.8□□□□□ -1.48
PDE1YGL248W ALF1P53904 254 aa5.8□□□□□ -1.48
PDE1YGL248W YPL109CQ02981 657 aa5.8□□□□□ -1.48
PDE1YGL248W EAR1Q03212 550 aa5.8□□□□□ -1.48
PDE1YGL248W BLS1Q06071 122 aa5.8□□□□□ -1.48
PDE1YGL248W BRE4Q07660 1125 aa5.8□□□□□ -1.48
PDE1YGL248W MLH2Q07980 695 aa5.8□□□□□ -1.48
PDE1YGL248W YTM1Q12024 460 aaPredicted RBP5.8□□□□□ -1.48
PDE1YGL248W REX3Q12090 404 aa5.8□□□□□ -1.48
PDE1YGL248W SFI1Q12369 946 aa5.8□□□□□ -1.48
PDE1YGL248W MSS18P08593 268 aa5.79□□□□□ -1.48
PDE1YGL248W RPC53P25441 422 aa5.79□□□□□ -1.48
PDE1YGL248W PUB1P32588 453 aaKnown RBP RIP-Chip data5.79□□□□□ -1.48not detected
PDE1YGL248W SEG2P34250 1132 aa5.79□□□□□ -1.48
PDE1YGL248W TFA2P36145 328 aa5.79□□□□□ -1.48
PDE1YGL248W FTH1P38310 465 aa5.79□□□□□ -1.48
PDE1YGL248W HSM3P38348 480 aa5.79□□□□□ -1.48
PDE1YGL248W EMP65P40085 556 aa5.79□□□□□ -1.48
PDE1YGL248W TOK1P40310 691 aa5.79□□□□□ -1.48
PDE1YGL248W ERR3P42222 437 aa5.79□□□□□ -1.48
PDE1YGL248W BUD27P43573 796 aaKnown RBP RIP-Chip data5.79□□□□□ -1.48not detected
PDE1YGL248W SPO1P53541 631 aa5.79□□□□□ -1.48
PDE1YGL248W RAT1Q02792 1006 aaKnown RBP5.79□□□□□ -1.48
PDE1YGL248W ADI1Q03677 179 aa5.79□□□□□ -1.48
PDE1YGL248W PRP42Q03776 544 aaKnown RBP5.79□□□□□ -1.48
PDE1YGL248W INP54Q08227 384 aaKnown RBP5.79□□□□□ -1.48
PDE1YGL248W SOG2Q08817 791 aa5.79□□□□□ -1.48
PDE1YGL248W RKM4Q12504 494 aa5.79□□□□□ -1.48
PDE1YGL248W FUS1P11710 512 aa5.78□□□□□ -1.48
PDE1YGL248W MRPL25P23369 157 aa5.78□□□□□ -1.48
PDE1YGL248W MSH3P25336 1018 aa5.78□□□□□ -1.48
PDE1YGL248W PRP19P32523 503 aaKnown RBP5.78□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms