RNA–Protein interactions for RNA: YGL244W

RTF1, Transcript of Subunit of RNAPII-associated chromatin remodeling Paf1 complex, yeastyeast

Gene RTF1, Length 1,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTF1YGL244W CLN3P13365 580 aa12.1□□□□□ -0.47
RTF1YGL244W CAP1P28495 268 aaKnown RBP12.1□□□□□ -0.47
RTF1YGL244W GPI10P30777 616 aa12.1□□□□□ -0.47
RTF1YGL244W UBP6P43593 499 aaKnown RBP12.1□□□□□ -0.47
RTF1YGL244W LYS4P49367 693 aaPredicted RBP12.1□□□□□ -0.47
RTF1YGL244W YNL040WP53960 456 aaPredicted RBP12.1□□□□□ -0.47
RTF1YGL244W YDL124WQ07551 312 aaKnown RBP12.1□□□□□ -0.47
RTF1YGL244W RLP24Q07915 199 aaKnown RBP12.1□□□□□ -0.47
RTF1YGL244W GPN2Q08726 347 aaPredicted RBP12.1□□□□□ -0.47
RTF1YGL244W SPT2P06843 333 aaPredicted RBP12.1□□□□□ -0.47
RTF1YGL244W ILV2P07342 687 aaKnown RBP12.1□□□□□ -0.47
RTF1YGL244W PHO8P11491 566 aa12.1□□□□□ -0.47
RTF1YGL244W VMA4P22203 233 aaKnown RBP12.1□□□□□ -0.47
RTF1YGL244W TFC3P34111 1160 aa12.1□□□□□ -0.47
RTF1YGL244W PTC3P34221 468 aaKnown RBP12.1□□□□□ -0.47
RTF1YGL244W NCL1P38205 684 aaKnown RBP12.1□□□□□ -0.47
RTF1YGL244W LCB2P40970 561 aa12.1□□□□□ -0.47
RTF1YGL244W EMW1P42842 904 aaKnown RBP12.1□□□□□ -0.47
RTF1YGL244W PUF4P25339 888 aaKnown RBP RIP-Chip data12.09□□□□□ -0.47not detected
RTF1YGL244W KIP1P28742 1111 aa12.09□□□□□ -0.47
RTF1YGL244W DBF4P32325 704 aa12.09□□□□□ -0.47
RTF1YGL244W YBL055CP34220 418 aaPredicted RBP12.09□□□□□ -0.47
RTF1YGL244W PGM2P37012 569 aaKnown RBP12.09□□□□□ -0.47
RTF1YGL244W ORC4P54791 529 aa12.09□□□□□ -0.47
RTF1YGL244W PUF3Q07807 879 aaKnown RBP RIP-Chip data12.09□□□□□ -0.47not detected
RTF1YGL244W GAS5Q08193 484 aa12.09□□□□□ -0.47
RTF1YGL244W ABP140Q08641 628 aaKnown RBP12.09□□□□□ -0.47
RTF1YGL244W CDC33P07260 213 aaKnown RBP12.08□□□□□ -0.48
RTF1YGL244W SCJ1P25303 377 aa12.08□□□□□ -0.48
RTF1YGL244W YKU70P32807 602 aa12.08□□□□□ -0.48
RTF1YGL244W YBR032WP38223 100 aa12.08□□□□□ -0.48
RTF1YGL244W HSM3P38348 480 aa12.08□□□□□ -0.48
RTF1YGL244W HOS4P40480 1083 aa12.08□□□□□ -0.48
RTF1YGL244W PCL10P53124 433 aa12.08□□□□□ -0.48
RTF1YGL244W DIP5P53388 608 aa12.08□□□□□ -0.48
RTF1YGL244W TIM8P57744 87 aa12.08□□□□□ -0.48
RTF1YGL244W ATG16Q03818 150 aa12.08□□□□□ -0.48
RTF1YGL244W FKS1P38631 1876 aaKnown RBP12.08□□□□□ -0.48
RTF1YGL244W SRD1P09007 221 aa12.07□□□□□ -0.48
RTF1YGL244W CBF1P17106 351 aa12.07□□□□□ -0.48
RTF1YGL244W REC107P21651 314 aa12.07□□□□□ -0.48
RTF1YGL244W MRPL25P23369 157 aa12.07□□□□□ -0.48
RTF1YGL244W OXP1P28273 1286 aa12.07□□□□□ -0.48
RTF1YGL244W EFB1P32471 206 aaKnown RBP12.07□□□□□ -0.48
RTF1YGL244W UBP13P38187 747 aa12.07□□□□□ -0.48
RTF1YGL244W NDT80P38830 627 aa12.07□□□□□ -0.48
RTF1YGL244W FMS1P50264 508 aa12.07□□□□□ -0.48
RTF1YGL244W BET4Q00618 327 aa12.07□□□□□ -0.48
RTF1YGL244W CUR1Q06469 252 aa12.07□□□□□ -0.48
RTF1YGL244W GCR1P07261 785 aa12.06□□□□□ -0.48
RTF1YGL244W SUP45P12385 437 aaKnown RBP12.06□□□□□ -0.48
RTF1YGL244W HEM15P16622 393 aa12.06□□□□□ -0.48
RTF1YGL244W KIP2P28743 706 aa12.06□□□□□ -0.48
RTF1YGL244W DPH5P32469 300 aaPredicted RBP12.06□□□□□ -0.48
RTF1YGL244W RRN6P32786 894 aa12.06□□□□□ -0.48
RTF1YGL244W MRE11P32829 692 aa12.06□□□□□ -0.48
RTF1YGL244W PGM1P33401 570 aaKnown RBP12.06□□□□□ -0.48
RTF1YGL244W CCL1P37366 393 aa12.06□□□□□ -0.48
RTF1YGL244W CST26P38226 397 aa12.06□□□□□ -0.48
RTF1YGL244W YML002WP0CF17 737 aa12.06□□□□□ -0.48
RTF1YGL244W TRM2P33753 639 aa12.06□□□□□ -0.48
RTF1YGL244W SIP5P40210 489 aaKnown RBP12.06□□□□□ -0.48
RTF1YGL244W YGR111WP53265 400 aa12.06□□□□□ -0.48
RTF1YGL244W GTB1Q04924 702 aa12.06□□□□□ -0.48
RTF1YGL244W TDA5Q06417 326 aaKnown RBP12.06□□□□□ -0.48
RTF1YGL244W ARP6Q12509 438 aa12.06□□□□□ -0.48
RTF1YGL244W THS1P04801 734 aaKnown RBP12.05□□□□□ -0.48
RTF1YGL244W ERP5P38819 212 aa12.05□□□□□ -0.48
RTF1YGL244W RPN3P40016 523 aaKnown RBP12.05□□□□□ -0.48
RTF1YGL244W YMR134WP40207 237 aa12.05□□□□□ -0.48
RTF1YGL244W YTA12P40341 825 aa12.05□□□□□ -0.48
RTF1YGL244W VPS70P47161 811 aa12.05□□□□□ -0.48
RTF1YGL244W TAF6P53040 516 aa12.05□□□□□ -0.48
RTF1YGL244W YDL206WQ12424 762 aa12.05□□□□□ -0.48
RTF1YGL244W OCA6Q12454 224 aa12.05□□□□□ -0.48
RTF1YGL244W RKM4Q12504 494 aa12.05□□□□□ -0.48
RTF1YGL244W KIN1P13185 1064 aa12.04□□□□□ -0.48
RTF1YGL244W PRP22P24384 1145 aaKnown RBP12.04□□□□□ -0.48
RTF1YGL244W TOA1P32773 286 aa12.04□□□□□ -0.48
RTF1YGL244W HFD1Q04458 532 aa12.04□□□□□ -0.48
RTF1YGL244W SIN4P32259 974 aa12.03□□□□□ -0.48
RTF1YGL244W GVP36P40531 326 aaKnown RBP12.03□□□□□ -0.48
RTF1YGL244W GSC2P40989 1895 aa12.03□□□□□ -0.48
RTF1YGL244W CNM67P53865 581 aaKnown RBP12.03□□□□□ -0.48
RTF1YGL244W ARK1P53974 638 aa12.03□□□□□ -0.48
RTF1YGL244W ATP25Q03153 612 aa12.03□□□□□ -0.48
RTF1YGL244W YMR027WQ04371 470 aa12.03□□□□□ -0.48
RTF1YGL244W VHS3Q08438 674 aa12.03□□□□□ -0.48
RTF1YGL244W CDC53Q12018 815 aaKnown RBP12.03□□□□□ -0.48
RTF1YGL244W GRX6Q12438 231 aa12.03□□□□□ -0.48
RTF1YGL244W KEX2P13134 814 aa12.03□□□□□ -0.48
RTF1YGL244W POP4P38336 279 aa12.03□□□□□ -0.48
RTF1YGL244W VPS4P52917 437 aa12.03□□□□□ -0.48
RTF1YGL244W TAN1P53072 289 aaPredicted RBP12.03□□□□□ -0.48
RTF1YGL244W LGE1Q02796 332 aaKnown RBP12.03□□□□□ -0.48
RTF1YGL244W YDR222WQ04925 415 aa12.03□□□□□ -0.48
RTF1YGL244W DON1Q05610 365 aa12.03□□□□□ -0.48
RTF1YGL244W FLO11P08640 1367 aa12.02□□□□□ -0.49
RTF1YGL244W RAD51P25454 400 aa12.02□□□□□ -0.49
RTF1YGL244W YBL028CP38202 106 aa12.02□□□□□ -0.49
Retrieved 100 of 5,963 RNA–protein pairs in 45.1 ms