RNA–Protein interactions for RNA: YEL065W

SIT1, Transcript of Ferrioxamine B transporter, yeast

Gene SIT1, Length 1,887 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIT1	YEL065W	XRS2	P33301	854 aa		6.29	□□□□□ -1.4
SIT1	YEL065W	RIB7	P33312	244 aa		6.29	□□□□□ -1.4
SIT1	YEL065W	YBR238C	P38330	731 aa	Known RBP	6.29	□□□□□ -1.4
SIT1	YEL065W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	6.29	□□□□□ -1.4	not detected
SIT1	YEL065W	ARE2	P53629	642 aa	Known RBP	6.29	□□□□□ -1.4
SIT1	YEL065W	ENA2	Q01896	1091 aa		6.29	□□□□□ -1.4
SIT1	YEL065W	YMR155W	Q03795	547 aa		6.29	□□□□□ -1.4
SIT1	YEL065W	YDR131C	Q03899	556 aa		6.29	□□□□□ -1.4
SIT1	YEL065W	ARP9	Q05123	467 aa		6.29	□□□□□ -1.4
SIT1	YEL065W	RIX7	Q07844	837 aa	Known RBP	6.29	□□□□□ -1.4
SIT1	YEL065W	ARP7	Q12406	477 aa		6.29	□□□□□ -1.4
SIT1	YEL065W	ENA5	Q12691	1091 aa		6.29	□□□□□ -1.4
SIT1	YEL065W	CDC16	P09798	840 aa		6.28	□□□□□ -1.4
SIT1	YEL065W	MLS1	P30952	554 aa		6.28	□□□□□ -1.4
SIT1	YEL065W	PYC2	P32327	1180 aa	Known RBP	6.28	□□□□□ -1.4
SIT1	YEL065W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	6.28	□□□□□ -1.4	not detected
SIT1	YEL065W	FBP26	P32604	452 aa		6.28	□□□□□ -1.4
SIT1	YEL065W	NIP100	P33420	868 aa		6.28	□□□□□ -1.4
SIT1	YEL065W	YLF2	P38746	405 aa		6.28	□□□□□ -1.4
SIT1	YEL065W	HXT6	P39003	570 aa	Known RBP	6.28	□□□□□ -1.4
SIT1	YEL065W	HXT7	P39004	570 aa		6.28	□□□□□ -1.4
SIT1	YEL065W	DUN1	P39009	513 aa		6.28	□□□□□ -1.4
SIT1	YEL065W	SIP5	P40210	489 aa	Known RBP	6.28	□□□□□ -1.4
SIT1	YEL065W	TAD1	P53065	400 aa		6.28	□□□□□ -1.4
SIT1	YEL065W	SEC5	P89102	971 aa		6.28	□□□□□ -1.4
SIT1	YEL065W	YDR306C	Q06640	478 aa		6.28	□□□□□ -1.4
SIT1	YEL065W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	6.28	□□□□□ -1.4	not detected
SIT1	YEL065W	WTM2	Q12206	467 aa		6.28	□□□□□ -1.4
SIT1	YEL065W	TCB3	Q03640	1545 aa	Known RBP	6.28	□□□□□ -1.4
SIT1	YEL065W	HVG1	P0CE11	249 aa		6.28	□□□□□ -1.4
SIT1	YEL065W	HSF1	P10961	833 aa		6.28	□□□□□ -1.4
SIT1	YEL065W	GUK1	P15454	187 aa	Known RBP	6.28	□□□□□ -1.4
SIT1	YEL065W	SEC21	P32074	935 aa	Known RBP	6.28	□□□□□ -1.4
SIT1	YEL065W	HOG1	P32485	435 aa		6.28	□□□□□ -1.4
SIT1	YEL065W	YBR225W	P38321	900 aa		6.28	□□□□□ -1.4
SIT1	YEL065W	AIM46	P38885	310 aa		6.28	□□□□□ -1.4
SIT1	YEL065W	SPC72	P39723	622 aa		6.28	□□□□□ -1.4
SIT1	YEL065W	POL31	P46957	487 aa		6.28	□□□□□ -1.4
SIT1	YEL065W	ASK10	P48361	1146 aa		6.28	□□□□□ -1.4
SIT1	YEL065W	SHE10	P53075	577 aa		6.28	□□□□□ -1.4
SIT1	YEL065W	VTC3	Q02725	835 aa		6.28	□□□□□ -1.4
SIT1	YEL065W	YLR345W	Q06137	509 aa		6.28	□□□□□ -1.4
SIT1	YEL065W	EMG1	Q06287	252 aa	Known RBP	6.28	□□□□□ -1.4
SIT1	YEL065W	AOS1	Q06624	347 aa		6.28	□□□□□ -1.4
SIT1	YEL065W	RSC3	Q06639	885 aa		6.28	□□□□□ -1.4
SIT1	YEL065W	YCG1	Q06680	1035 aa		6.28	□□□□□ -1.4
SIT1	YEL065W	AVO1	Q08236	1176 aa		6.28	□□□□□ -1.4
SIT1	YEL065W	CKA1	P15790	372 aa		6.27	□□□□□ -1.41
SIT1	YEL065W	PET123	P17558	318 aa		6.27	□□□□□ -1.41
SIT1	YEL065W	SYP1	P25623	870 aa	Known RBP	6.27	□□□□□ -1.41
SIT1	YEL065W	SWC3	P31376	625 aa		6.27	□□□□□ -1.41
SIT1	YEL065W	GIP1	P38229	639 aa		6.27	□□□□□ -1.41
SIT1	YEL065W	LTP1	P40347	161 aa		6.27	□□□□□ -1.41
SIT1	YEL065W	YJL068C	P40363	299 aa		6.27	□□□□□ -1.41
SIT1	YEL065W	GYP8	P43570	497 aa		6.27	□□□□□ -1.41
SIT1	YEL065W	HST1	P53685	503 aa		6.27	□□□□□ -1.41
SIT1	YEL065W	VPS9	P54787	451 aa		6.27	□□□□□ -1.41
SIT1	YEL065W	YMR111C	Q04461	462 aa	Predicted RBP	6.27	□□□□□ -1.41
SIT1	YEL065W	MFB1	Q04922	465 aa		6.27	□□□□□ -1.41
SIT1	YEL065W	VID22	Q05934	901 aa		6.27	□□□□□ -1.41
SIT1	YEL065W	YSH1	Q06224	779 aa	Predicted RBP	6.27	□□□□□ -1.41
SIT1	YEL065W	GUP2	Q08929	609 aa		6.27	□□□□□ -1.41
SIT1	YEL065W	NFI1	Q12216	726 aa		6.27	□□□□□ -1.41
SIT1	YEL065W	MTF2	P10849	440 aa		6.26	□□□□□ -1.41
SIT1	YEL065W	MNE1	P24720	663 aa		6.26	□□□□□ -1.41
SIT1	YEL065W	AAR2	P32357	355 aa	Predicted RBP	6.26	□□□□□ -1.41
SIT1	YEL065W	MDL1	P33310	695 aa		6.26	□□□□□ -1.41
SIT1	YEL065W	HSL7	P38274	827 aa		6.26	□□□□□ -1.41
SIT1	YEL065W	FTH1	P38310	465 aa		6.26	□□□□□ -1.41
SIT1	YEL065W	RIM11	P38615	370 aa		6.26	□□□□□ -1.41
SIT1	YEL065W	LAM1	P38851	1228 aa		6.26	□□□□□ -1.41
SIT1	YEL065W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	6.26	□□□□□ -1.41	RIP-Chip
SIT1	YEL065W	NPR2	P39923	615 aa		6.26	□□□□□ -1.41
SIT1	YEL065W	TIF4631	P39935	952 aa	Known RBP	6.26	□□□□□ -1.41
SIT1	YEL065W	UTP7	P40055	554 aa	Known RBP	6.26	□□□□□ -1.41
SIT1	YEL065W	TOK1	P40310	691 aa		6.26	□□□□□ -1.41
SIT1	YEL065W	TFC6	Q06339	672 aa		6.26	□□□□□ -1.41
SIT1	YEL065W	YDL073W	Q07454	984 aa		6.26	□□□□□ -1.41
SIT1	YEL065W	YMR084W	A2P2R3	262 aa		6.26	□□□□□ -1.41
SIT1	YEL065W	DBP5	P20449	482 aa	Known RBP	6.26	□□□□□ -1.41
SIT1	YEL065W	MLF3	P32047	452 aa		6.26	□□□□□ -1.41
SIT1	YEL065W	BNI4	P53858	892 aa		6.26	□□□□□ -1.41
SIT1	YEL065W	KCS1	Q12494	1050 aa		6.26	□□□□□ -1.41
SIT1	YEL065W	PAR32	Q12515	295 aa	Known RBP	6.26	□□□□□ -1.41
SIT1	YEL065W	NCP1	P16603	691 aa	Known RBP	6.25	□□□□□ -1.41
SIT1	YEL065W	YCL049C	P25577	312 aa		6.25	□□□□□ -1.41
SIT1	YEL065W	SLA1	P32790	1244 aa		6.25	□□□□□ -1.41
SIT1	YEL065W	YBR287W	P38355	427 aa		6.25	□□□□□ -1.41
SIT1	YEL065W	SKP2	P42843	763 aa		6.25	□□□□□ -1.41
SIT1	YEL065W	CIR1	P42940	261 aa		6.25	□□□□□ -1.41
SIT1	YEL065W	FYV8	P46949	817 aa	Known RBP	6.25	□□□□□ -1.41
SIT1	YEL065W	YGR283C	P53336	341 aa	Predicted RBP	6.25	□□□□□ -1.41
SIT1	YEL065W	PEX29	Q03370	554 aa		6.25	□□□□□ -1.41
SIT1	YEL065W	BUD20	Q08004	166 aa	Predicted RBP	6.25	□□□□□ -1.41
SIT1	YEL065W	TRM8	Q12009	286 aa		6.25	□□□□□ -1.41
SIT1	YEL065W	MET17	P06106	444 aa		6.24	□□□□□ -1.41
SIT1	YEL065W	NGG1	P32494	702 aa		6.24	□□□□□ -1.41
SIT1	YEL065W	DLD1	P32891	587 aa		6.24	□□□□□ -1.41
SIT1	YEL065W	PPQ1	P32945	549 aa		6.24	□□□□□ -1.41
SIT1	YEL065W	TDA3	P38758	523 aa		6.24	□□□□□ -1.41

Retrieved 100 of 5,963 RNA–protein pairs in 65.4 ms