RNA–Protein interactions for RNA: YDR288W

NSE3, Transcript of Component of the SMC5-SMC6 complex, yeast

Gene NSE3, Length 912 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NSE3	YDR288W	YHR078W	P38799	552 aa		6.02	□□□□□ -1.45
NSE3	YDR288W	SDP1	P40479	209 aa		6.02	□□□□□ -1.45
NSE3	YDR288W	URM1	P40554	99 aa	Predicted RBP	6.02	□□□□□ -1.45
NSE3	YDR288W	MET13	P53128	600 aa		6.02	□□□□□ -1.45
NSE3	YDR288W	CDA2	Q06703	312 aa		6.02	□□□□□ -1.45
NSE3	YDR288W	GUD1	Q07729	489 aa		6.02	□□□□□ -1.45
NSE3	YDR288W	GUP2	Q08929	609 aa		6.02	□□□□□ -1.45
NSE3	YDR288W	FBP1	P09201	348 aa		6.01	□□□□□ -1.45
NSE3	YDR288W	CDC20	P26309	610 aa		6.01	□□□□□ -1.45
NSE3	YDR288W	TSA1	P34760	196 aa	Known RBP	6.01	□□□□□ -1.45
NSE3	YDR288W	PZF1	P39933	429 aa		6.01	□□□□□ -1.45
NSE3	YDR288W	CHA4	P43634	648 aa		6.01	□□□□□ -1.45
NSE3	YDR288W	SSY5	P47002	699 aa		6.01	□□□□□ -1.45
NSE3	YDR288W	YGR237C	P50089	785 aa		6.01	□□□□□ -1.45
NSE3	YDR288W	AIM14	P53109	570 aa		6.01	□□□□□ -1.45
NSE3	YDR288W	UPC2	Q12151	913 aa		6.01	□□□□□ -1.45
NSE3	YDR288W	SWM1	Q12379	170 aa		6.01	□□□□□ -1.45
NSE3	YDR288W	CDC6	P09119	513 aa		6	□□□□□ -1.45
NSE3	YDR288W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	6	□□□□□ -1.45	not detected
NSE3	YDR288W	RNQ1	P25367	405 aa		6	□□□□□ -1.45
NSE3	YDR288W	TYS1	P36421	394 aa	Known RBP	6	□□□□□ -1.45
NSE3	YDR288W	CTF8	P38877	133 aa		6	□□□□□ -1.45
NSE3	YDR288W	UBP12	P39538	1254 aa		6	□□□□□ -1.45
NSE3	YDR288W	YEN1	P40028	759 aa		6	□□□□□ -1.45
NSE3	YDR288W	ZIP2	P53061	704 aa		6	□□□□□ -1.45
NSE3	YDR288W	UME1	Q03010	460 aa		6	□□□□□ -1.45
NSE3	YDR288W	YLR224W	Q05947	369 aa		6	□□□□□ -1.45
NSE3	YDR288W	ATG33	Q06485	197 aa		6	□□□□□ -1.45
NSE3	YDR288W	NPC2	Q12408	173 aa		6	□□□□□ -1.45
NSE3	YDR288W	GRX4	P32642	244 aa		5.99	□□□□□ -1.45
NSE3	YDR288W	PCM1	P38628	557 aa	Known RBP	5.99	□□□□□ -1.45
NSE3	YDR288W	PLB1	P39105	664 aa		5.99	□□□□□ -1.45
NSE3	YDR288W	MGS1	P40151	587 aa		5.99	□□□□□ -1.45
NSE3	YDR288W	MTR3	P48240	250 aa	Predicted RBP	5.99	□□□□□ -1.45
NSE3	YDR288W	THI21	Q08975	551 aa		5.99	□□□□□ -1.45
NSE3	YDR288W	FAP7	Q12055	197 aa	Predicted RBP	5.99	□□□□□ -1.45
NSE3	YDR288W	PRP6	P19735	899 aa	Predicted RBP	5.98	□□□□□ -1.45
NSE3	YDR288W	CAD1	P24813	409 aa	Known RBP	5.98	□□□□□ -1.45
NSE3	YDR288W	NGG1	P32494	702 aa		5.98	□□□□□ -1.45
NSE3	YDR288W	SAK1	P38990	1142 aa		5.98	□□□□□ -1.45
NSE3	YDR288W	UBC9	P50623	157 aa	Predicted RBP	5.98	□□□□□ -1.45
NSE3	YDR288W	NCS6	P53088	359 aa		5.98	□□□□□ -1.45
NSE3	YDR288W	RPN7	Q06103	429 aa	Known RBP	5.98	□□□□□ -1.45
NSE3	YDR288W	YLR358C	O13565	187 aa		5.97	□□□□□ -1.45
NSE3	YDR288W	HMG1	P12683	1054 aa		5.97	□□□□□ -1.45
NSE3	YDR288W	PRP19	P32523	503 aa	Known RBP	5.97	□□□□□ -1.45
NSE3	YDR288W	YDR338C	Q05497	695 aa		5.97	□□□□□ -1.45
NSE3	YDR288W	FLR1	P38124	548 aa		5.96	□□□□□ -1.46
NSE3	YDR288W	BNA2	P47125	453 aa		5.96	□□□□□ -1.46
NSE3	YDR288W	PKH1	Q03407	766 aa		5.96	□□□□□ -1.46
NSE3	YDR288W	HFD1	Q04458	532 aa		5.96	□□□□□ -1.46
NSE3	YDR288W	PEX19	Q07418	342 aa		5.96	□□□□□ -1.46
NSE3	YDR288W	STE14	P32584	239 aa		5.95	□□□□□ -1.46
NSE3	YDR288W	ELM1	P32801	640 aa		5.95	□□□□□ -1.46
NSE3	YDR288W	YKR051W	P36142	418 aa		5.95	□□□□□ -1.46
NSE3	YDR288W	CKB2	P38930	258 aa		5.95	□□□□□ -1.46
NSE3	YDR288W	VHR1	P40522	640 aa		5.95	□□□□□ -1.46
NSE3	YDR288W	TMA10	Q06177	86 aa		5.95	□□□□□ -1.46
NSE3	YDR288W	KCS1	Q12494	1050 aa		5.95	□□□□□ -1.46
NSE3	YDR288W	Q0142	Q9ZZW4	58 aa		5.95	□□□□□ -1.46
NSE3	YDR288W	SSB1	P11484	613 aa	Known RBP	5.94	□□□□□ -1.46
NSE3	YDR288W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	5.94	□□□□□ -1.46	not detected
NSE3	YDR288W	SSB2	P40150	613 aa	Known RBP	5.94	□□□□□ -1.46
NSE3	YDR288W	BFA1	P47113	574 aa		5.94	□□□□□ -1.46
NSE3	YDR288W	YJR096W	P47137	282 aa		5.94	□□□□□ -1.46
NSE3	YDR288W	YBP2	P53169	641 aa		5.94	□□□□□ -1.46
NSE3	YDR288W	ORC4	P54791	529 aa		5.94	□□□□□ -1.46
NSE3	YDR288W	MTQ2	Q03920	221 aa	Predicted RBP	5.94	□□□□□ -1.46
NSE3	YDR288W	YLR149C	Q99296	730 aa		5.94	□□□□□ -1.46
NSE3	YDR288W	SEC21	P32074	935 aa	Known RBP	5.93	□□□□□ -1.46
NSE3	YDR288W	TDA3	P38758	523 aa		5.93	□□□□□ -1.46
NSE3	YDR288W	MSS4	P38994	779 aa		5.93	□□□□□ -1.46
NSE3	YDR288W	MCM6	P53091	1017 aa	Known RBP	5.93	□□□□□ -1.46
NSE3	YDR288W	MUS81	Q04149	632 aa	Predicted RBP	5.93	□□□□□ -1.46
NSE3	YDR288W	MIH1	P23748	554 aa		5.92	□□□□□ -1.46
NSE3	YDR288W	CCR4	P31384	837 aa	Known RBP	5.92	□□□□□ -1.46
NSE3	YDR288W	LST4	P34239	828 aa		5.92	□□□□□ -1.46
NSE3	YDR288W	ASI2	P53895	289 aa		5.92	□□□□□ -1.46
NSE3	YDR288W	KAR4	P25583	335 aa		5.91	□□□□□ -1.46
NSE3	YDR288W	YKR018C	P36114	725 aa		5.91	□□□□□ -1.46
NSE3	YDR288W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	5.91	□□□□□ -1.46	not detected
NSE3	YDR288W	PFA3	P42836	336 aa		5.91	□□□□□ -1.46
NSE3	YDR288W	MNN10	P50108	393 aa	Known RBP	5.91	□□□□□ -1.46
NSE3	YDR288W	PCL10	P53124	433 aa		5.91	□□□□□ -1.46
NSE3	YDR288W	STE11	P23561	717 aa		5.9	□□□□□ -1.46
NSE3	YDR288W	UBP5	P39944	805 aa		5.9	□□□□□ -1.46
NSE3	YDR288W	YGR153W	P48238	217 aa		5.9	□□□□□ -1.46
NSE3	YDR288W	YTM1	Q12024	460 aa	Predicted RBP	5.9	□□□□□ -1.46
NSE3	YDR288W	TRM11	Q12463	433 aa		5.9	□□□□□ -1.46
NSE3	YDR288W	YLR415C	O13578	112 aa		5.89	□□□□□ -1.47
NSE3	YDR288W	TUB3	P09734	445 aa	Known RBP	5.89	□□□□□ -1.47
NSE3	YDR288W	THI80	P35202	319 aa		5.89	□□□□□ -1.47
NSE3	YDR288W	YKR075C	P36155	307 aa		5.89	□□□□□ -1.47
NSE3	YDR288W	RPP1	P38786	293 aa		5.89	□□□□□ -1.47
NSE3	YDR288W	GPP1	P41277	250 aa	Known RBP	5.89	□□□□□ -1.47
NSE3	YDR288W	GPG1	P53130	126 aa		5.89	□□□□□ -1.47
NSE3	YDR288W	GPD1	Q00055	391 aa	Known RBP	5.89	□□□□□ -1.47
NSE3	YDR288W	PFK1	P16861	987 aa	Known RBP	5.88	□□□□□ -1.47
NSE3	YDR288W	TOM20	P35180	183 aa		5.88	□□□□□ -1.47
NSE3	YDR288W	MNN4	P36044	1178 aa		5.88	□□□□□ -1.47

Retrieved 100 of 5,963 RNA–protein pairs in 77.3 ms