RNA–Protein interactions for RNA: YDR006C

SOK1, Transcript of Protein of unknown function, yeast

Gene SOK1, Length 2,706 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SOK1	YDR006C	VTC2	P43585	828 aa		3.22	□□□□□ -1.89
SOK1	YDR006C	DUG1	P43616	481 aa	Known RBP	3.22	□□□□□ -1.89
SOK1	YDR006C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	3.22	□□□□□ -1.89	not detected
SOK1	YDR006C	YJR096W	P47137	282 aa		3.22	□□□□□ -1.89
SOK1	YDR006C	VPS30	Q02948	557 aa		3.22	□□□□□ -1.89
SOK1	YDR006C	YPR071W	Q12346	211 aa		3.22	□□□□□ -1.89
SOK1	YDR006C	RKM4	Q12504	494 aa		3.22	□□□□□ -1.89
SOK1	YDR006C	SSM4	P40318	1319 aa		3.21	□□□□□ -1.89
SOK1	YDR006C	DBP3	P20447	523 aa	Known RBP	3.21	□□□□□ -1.89
SOK1	YDR006C	NIC96	P34077	839 aa		3.21	□□□□□ -1.89
SOK1	YDR006C	GLY1	P37303	387 aa	Known RBP	3.21	□□□□□ -1.89
SOK1	YDR006C	PCM1	P38628	557 aa	Known RBP	3.21	□□□□□ -1.89
SOK1	YDR006C	FMP10	P40098	244 aa		3.21	□□□□□ -1.89
SOK1	YDR006C	TED1	P40533	473 aa		3.21	□□□□□ -1.89
SOK1	YDR006C	HIS6	P40545	261 aa		3.21	□□□□□ -1.89
SOK1	YDR006C	UBP6	P43593	499 aa	Known RBP	3.21	□□□□□ -1.89
SOK1	YDR006C	ENT3	P47160	408 aa		3.21	□□□□□ -1.89
SOK1	YDR006C	HXT16	P47185	567 aa		3.21	□□□□□ -1.89
SOK1	YDR006C	ADE12	P80210	433 aa	Known RBP	3.21	□□□□□ -1.89
SOK1	YDR006C	UBP2	Q01476	1272 aa		3.21	□□□□□ -1.89
SOK1	YDR006C	RSC2	Q06488	889 aa		3.21	□□□□□ -1.89
SOK1	YDR006C	MLC2	Q06580	163 aa		3.21	□□□□□ -1.89
SOK1	YDR006C	CUE5	Q08412	411 aa	Known RBP	3.21	□□□□□ -1.89
SOK1	YDR006C	KEL3	Q08979	651 aa	Predicted RBP	3.21	□□□□□ -1.89
SOK1	YDR006C	CHD1	P32657	1468 aa		3.21	□□□□□ -1.9
SOK1	YDR006C	SNF1	P06782	633 aa	Known RBP	3.21	□□□□□ -1.9
SOK1	YDR006C	RPL11A	P0C0W9	174 aa	Known RBP	3.21	□□□□□ -1.9
SOK1	YDR006C	YEF3	P16521	1044 aa	Known RBP	3.21	□□□□□ -1.9
SOK1	YDR006C	YKL107W	P34251	309 aa		3.21	□□□□□ -1.9
SOK1	YDR006C	SPC72	P39723	622 aa		3.21	□□□□□ -1.9
SOK1	YDR006C	NOP16	P40007	231 aa	Known RBP	3.21	□□□□□ -1.9
SOK1	YDR006C	SAE2	P46946	345 aa		3.21	□□□□□ -1.9
SOK1	YDR006C	PIL1	P53252	339 aa	Known RBP	3.21	□□□□□ -1.9
SOK1	YDR006C	CPR6	P53691	371 aa	Known RBP	3.21	□□□□□ -1.9
SOK1	YDR006C	HRQ1	Q05549	1077 aa		3.21	□□□□□ -1.9
SOK1	YDR006C	ECM38	Q05902	660 aa	Predicted RBP	3.21	□□□□□ -1.9
SOK1	YDR006C	LCB5	Q06147	687 aa	Known RBP	3.21	□□□□□ -1.9
SOK1	YDR006C	YLR352W	Q06479	807 aa		3.21	□□□□□ -1.9
SOK1	YDR006C	RPL11B	Q3E757	174 aa	Predicted RBP	3.21	□□□□□ -1.9
SOK1	YDR006C	RNA1	P11745	407 aa	Known RBP	3.21	□□□□□ -1.9
SOK1	YDR006C	BUD2	P33314	1104 aa		3.21	□□□□□ -1.9
SOK1	YDR006C	TAF5	P38129	798 aa		3.21	□□□□□ -1.9
SOK1	YDR006C	MCM7	P38132	845 aa		3.21	□□□□□ -1.9
SOK1	YDR006C	AXL2	P38928	823 aa		3.21	□□□□□ -1.9
SOK1	YDR006C	NPR2	P39923	615 aa		3.21	□□□□□ -1.9
SOK1	YDR006C	CCT5	P40413	562 aa	Known RBP	3.21	□□□□□ -1.9
SOK1	YDR006C	YML6	P51998	286 aa		3.21	□□□□□ -1.9
SOK1	YDR006C	MTC3	P53077	123 aa		3.21	□□□□□ -1.9
SOK1	YDR006C	YGR045C	P53229	120 aa		3.21	□□□□□ -1.9
SOK1	YDR006C	GIS4	Q04233	774 aa		3.21	□□□□□ -1.9
SOK1	YDR006C	SPP382	Q06411	708 aa	Predicted RBP	3.21	□□□□□ -1.9
SOK1	YDR006C	YDL176W	Q12027	708 aa		3.21	□□□□□ -1.9
SOK1	YDR006C	YDR461C-A	Q2V2P7	80 aa		3.21	□□□□□ -1.9
SOK1	YDR006C	APE1	P14904	514 aa		3.2	□□□□□ -1.9
SOK1	YDR006C	VBA3	P25594	458 aa		3.2	□□□□□ -1.9
SOK1	YDR006C	GPB2	P39717	880 aa		3.2	□□□□□ -1.9
SOK1	YDR006C	NEO1	P40527	1151 aa		3.2	□□□□□ -1.9
SOK1	YDR006C	GPD2	P41911	440 aa	Known RBP	3.2	□□□□□ -1.9
SOK1	YDR006C	GTR1	Q00582	310 aa		3.2	□□□□□ -1.9
SOK1	YDR006C	MEC3	Q02574	474 aa		3.2	□□□□□ -1.9
SOK1	YDR006C	EAR1	Q03212	550 aa		3.2	□□□□□ -1.9
SOK1	YDR006C	SKY1	Q03656	742 aa		3.2	□□□□□ -1.9
SOK1	YDR006C	YLH47	Q06493	454 aa		3.2	□□□□□ -1.9
SOK1	YDR006C	DIB1	Q06819	143 aa	Predicted RBP	3.2	□□□□□ -1.9
SOK1	YDR006C	NYV1	Q12255	253 aa		3.2	□□□□□ -1.9
SOK1	YDR006C	PDC5	P16467	563 aa	Known RBP	3.2	□□□□□ -1.9
SOK1	YDR006C	PET10	P36139	283 aa		3.2	□□□□□ -1.9
SOK1	YDR006C	GIP2	P40036	548 aa		3.2	□□□□□ -1.9
SOK1	YDR006C	AXL1	P40851	1208 aa		3.2	□□□□□ -1.9
SOK1	YDR006C	TAD1	P53065	400 aa		3.2	□□□□□ -1.9
SOK1	YDR006C	PRP43	P53131	767 aa	Known RBP	3.2	□□□□□ -1.9
SOK1	YDR006C	CAF120	P53836	1060 aa		3.2	□□□□□ -1.9
SOK1	YDR006C	PSR2	Q07949	397 aa		3.2	□□□□□ -1.9
SOK1	YDR006C	CIR2	Q08822	631 aa		3.2	□□□□□ -1.9
SOK1	YDR006C	REX3	Q12090	404 aa		3.2	□□□□□ -1.9
SOK1	YDR006C	DAL80	P26343	269 aa		3.19	□□□□□ -1.9
SOK1	YDR006C	PAH1	P32567	862 aa		3.19	□□□□□ -1.9
SOK1	YDR006C	PPQ1	P32945	549 aa		3.19	□□□□□ -1.9
SOK1	YDR006C	ATG19	P35193	415 aa		3.19	□□□□□ -1.9
SOK1	YDR006C	FAT1	P38225	669 aa		3.19	□□□□□ -1.9
SOK1	YDR006C	YBR287W	P38355	427 aa		3.19	□□□□□ -1.9
SOK1	YDR006C	GGA2	P38817	585 aa	Known RBP	3.19	□□□□□ -1.9
SOK1	YDR006C	SIT1	P39980	628 aa		3.19	□□□□□ -1.9
SOK1	YDR006C	YJR039W	P47107	1121 aa		3.19	□□□□□ -1.9
SOK1	YDR006C	VHS3	Q08438	674 aa		3.19	□□□□□ -1.9
SOK1	YDR006C	CHS3	P29465	1165 aa		3.19	□□□□□ -1.9
SOK1	YDR006C	SLA2	P33338	968 aa		3.19	□□□□□ -1.9
SOK1	YDR006C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	3.19	□□□□□ -1.9	not detected
SOK1	YDR006C	MCD4	P36051	919 aa		3.19	□□□□□ -1.9
SOK1	YDR006C	YKL077W	P36081	392 aa		3.19	□□□□□ -1.9
SOK1	YDR006C	KSP1	P38691	1029 aa	Known RBP	3.19	□□□□□ -1.9
SOK1	YDR006C	TOK1	P40310	691 aa		3.19	□□□□□ -1.9
SOK1	YDR006C	SIP4	P46954	829 aa		3.19	□□□□□ -1.9
SOK1	YDR006C	YGR153W	P48238	217 aa		3.19	□□□□□ -1.9
SOK1	YDR006C	GUP1	P53154	560 aa		3.19	□□□□□ -1.9
SOK1	YDR006C	CFT2	Q12102	859 aa	Predicted RBP	3.19	□□□□□ -1.9
SOK1	YDR006C	PTC5	Q12511	572 aa		3.19	□□□□□ -1.9
SOK1	YDR006C	TOM70	P07213	617 aa	Known RBP	3.18	□□□□□ -1.9
SOK1	YDR006C	CDC26	P14724	124 aa		3.18	□□□□□ -1.9
SOK1	YDR006C	HOP1	P20050	605 aa		3.18	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms