RNA–Protein interactions for RNA: YDR006C

SOK1, Transcript of Protein of unknown function, yeastyeast

Gene SOK1, Length 2,706 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOK1YDR006C VTC2P43585 828 aa3.22□□□□□ -1.89
SOK1YDR006C DUG1P43616 481 aaKnown RBP3.22□□□□□ -1.89
SOK1YDR006C GUS1P46655 708 aaKnown RBP RIP-Chip data3.22□□□□□ -1.89not detected
SOK1YDR006C YJR096WP47137 282 aa3.22□□□□□ -1.89
SOK1YDR006C VPS30Q02948 557 aa3.22□□□□□ -1.89
SOK1YDR006C YPR071WQ12346 211 aa3.22□□□□□ -1.89
SOK1YDR006C RKM4Q12504 494 aa3.22□□□□□ -1.89
SOK1YDR006C SSM4P40318 1319 aa3.21□□□□□ -1.89
SOK1YDR006C DBP3P20447 523 aaKnown RBP3.21□□□□□ -1.89
SOK1YDR006C NIC96P34077 839 aa3.21□□□□□ -1.89
SOK1YDR006C GLY1P37303 387 aaKnown RBP3.21□□□□□ -1.89
SOK1YDR006C PCM1P38628 557 aaKnown RBP3.21□□□□□ -1.89
SOK1YDR006C FMP10P40098 244 aa3.21□□□□□ -1.89
SOK1YDR006C TED1P40533 473 aa3.21□□□□□ -1.89
SOK1YDR006C HIS6P40545 261 aa3.21□□□□□ -1.89
SOK1YDR006C UBP6P43593 499 aaKnown RBP3.21□□□□□ -1.89
SOK1YDR006C ENT3P47160 408 aa3.21□□□□□ -1.89
SOK1YDR006C HXT16P47185 567 aa3.21□□□□□ -1.89
SOK1YDR006C ADE12P80210 433 aaKnown RBP3.21□□□□□ -1.89
SOK1YDR006C UBP2Q01476 1272 aa3.21□□□□□ -1.89
SOK1YDR006C RSC2Q06488 889 aa3.21□□□□□ -1.89
SOK1YDR006C MLC2Q06580 163 aa3.21□□□□□ -1.89
SOK1YDR006C CUE5Q08412 411 aaKnown RBP3.21□□□□□ -1.89
SOK1YDR006C KEL3Q08979 651 aaPredicted RBP3.21□□□□□ -1.89
SOK1YDR006C CHD1P32657 1468 aa3.21□□□□□ -1.9
SOK1YDR006C SNF1P06782 633 aaKnown RBP3.21□□□□□ -1.9
SOK1YDR006C RPL11AP0C0W9 174 aaKnown RBP3.21□□□□□ -1.9
SOK1YDR006C YEF3P16521 1044 aaKnown RBP3.21□□□□□ -1.9
SOK1YDR006C YKL107WP34251 309 aa3.21□□□□□ -1.9
SOK1YDR006C SPC72P39723 622 aa3.21□□□□□ -1.9
SOK1YDR006C NOP16P40007 231 aaKnown RBP3.21□□□□□ -1.9
SOK1YDR006C SAE2P46946 345 aa3.21□□□□□ -1.9
SOK1YDR006C PIL1P53252 339 aaKnown RBP3.21□□□□□ -1.9
SOK1YDR006C CPR6P53691 371 aaKnown RBP3.21□□□□□ -1.9
SOK1YDR006C HRQ1Q05549 1077 aa3.21□□□□□ -1.9
SOK1YDR006C ECM38Q05902 660 aaPredicted RBP3.21□□□□□ -1.9
SOK1YDR006C LCB5Q06147 687 aaKnown RBP3.21□□□□□ -1.9
SOK1YDR006C YLR352WQ06479 807 aa3.21□□□□□ -1.9
SOK1YDR006C RPL11BQ3E757 174 aaPredicted RBP3.21□□□□□ -1.9
SOK1YDR006C RNA1P11745 407 aaKnown RBP3.21□□□□□ -1.9
SOK1YDR006C BUD2P33314 1104 aa3.21□□□□□ -1.9
SOK1YDR006C TAF5P38129 798 aa3.21□□□□□ -1.9
SOK1YDR006C MCM7P38132 845 aa3.21□□□□□ -1.9
SOK1YDR006C AXL2P38928 823 aa3.21□□□□□ -1.9
SOK1YDR006C NPR2P39923 615 aa3.21□□□□□ -1.9
SOK1YDR006C CCT5P40413 562 aaKnown RBP3.21□□□□□ -1.9
SOK1YDR006C YML6P51998 286 aa3.21□□□□□ -1.9
SOK1YDR006C MTC3P53077 123 aa3.21□□□□□ -1.9
SOK1YDR006C YGR045CP53229 120 aa3.21□□□□□ -1.9
SOK1YDR006C GIS4Q04233 774 aa3.21□□□□□ -1.9
SOK1YDR006C SPP382Q06411 708 aaPredicted RBP3.21□□□□□ -1.9
SOK1YDR006C YDL176WQ12027 708 aa3.21□□□□□ -1.9
SOK1YDR006C YDR461C-AQ2V2P7 80 aa3.21□□□□□ -1.9
SOK1YDR006C APE1P14904 514 aa3.2□□□□□ -1.9
SOK1YDR006C VBA3P25594 458 aa3.2□□□□□ -1.9
SOK1YDR006C GPB2P39717 880 aa3.2□□□□□ -1.9
SOK1YDR006C NEO1P40527 1151 aa3.2□□□□□ -1.9
SOK1YDR006C GPD2P41911 440 aaKnown RBP3.2□□□□□ -1.9
SOK1YDR006C GTR1Q00582 310 aa3.2□□□□□ -1.9
SOK1YDR006C MEC3Q02574 474 aa3.2□□□□□ -1.9
SOK1YDR006C EAR1Q03212 550 aa3.2□□□□□ -1.9
SOK1YDR006C SKY1Q03656 742 aa3.2□□□□□ -1.9
SOK1YDR006C YLH47Q06493 454 aa3.2□□□□□ -1.9
SOK1YDR006C DIB1Q06819 143 aaPredicted RBP3.2□□□□□ -1.9
SOK1YDR006C NYV1Q12255 253 aa3.2□□□□□ -1.9
SOK1YDR006C PDC5P16467 563 aaKnown RBP3.2□□□□□ -1.9
SOK1YDR006C PET10P36139 283 aa3.2□□□□□ -1.9
SOK1YDR006C GIP2P40036 548 aa3.2□□□□□ -1.9
SOK1YDR006C AXL1P40851 1208 aa3.2□□□□□ -1.9
SOK1YDR006C TAD1P53065 400 aa3.2□□□□□ -1.9
SOK1YDR006C PRP43P53131 767 aaKnown RBP3.2□□□□□ -1.9
SOK1YDR006C CAF120P53836 1060 aa3.2□□□□□ -1.9
SOK1YDR006C PSR2Q07949 397 aa3.2□□□□□ -1.9
SOK1YDR006C CIR2Q08822 631 aa3.2□□□□□ -1.9
SOK1YDR006C REX3Q12090 404 aa3.2□□□□□ -1.9
SOK1YDR006C DAL80P26343 269 aa3.19□□□□□ -1.9
SOK1YDR006C PAH1P32567 862 aa3.19□□□□□ -1.9
SOK1YDR006C PPQ1P32945 549 aa3.19□□□□□ -1.9
SOK1YDR006C ATG19P35193 415 aa3.19□□□□□ -1.9
SOK1YDR006C FAT1P38225 669 aa3.19□□□□□ -1.9
SOK1YDR006C YBR287WP38355 427 aa3.19□□□□□ -1.9
SOK1YDR006C GGA2P38817 585 aaKnown RBP3.19□□□□□ -1.9
SOK1YDR006C SIT1P39980 628 aa3.19□□□□□ -1.9
SOK1YDR006C YJR039WP47107 1121 aa3.19□□□□□ -1.9
SOK1YDR006C VHS3Q08438 674 aa3.19□□□□□ -1.9
SOK1YDR006C CHS3P29465 1165 aa3.19□□□□□ -1.9
SOK1YDR006C SLA2P33338 968 aa3.19□□□□□ -1.9
SOK1YDR006C PIN4P34217 668 aaKnown RBP RIP-Chip data3.19□□□□□ -1.9not detected
SOK1YDR006C MCD4P36051 919 aa3.19□□□□□ -1.9
SOK1YDR006C YKL077WP36081 392 aa3.19□□□□□ -1.9
SOK1YDR006C KSP1P38691 1029 aaKnown RBP3.19□□□□□ -1.9
SOK1YDR006C TOK1P40310 691 aa3.19□□□□□ -1.9
SOK1YDR006C SIP4P46954 829 aa3.19□□□□□ -1.9
SOK1YDR006C YGR153WP48238 217 aa3.19□□□□□ -1.9
SOK1YDR006C GUP1P53154 560 aa3.19□□□□□ -1.9
SOK1YDR006C CFT2Q12102 859 aaPredicted RBP3.19□□□□□ -1.9
SOK1YDR006C PTC5Q12511 572 aa3.19□□□□□ -1.9
SOK1YDR006C TOM70P07213 617 aaKnown RBP3.18□□□□□ -1.9
SOK1YDR006C CDC26P14724 124 aa3.18□□□□□ -1.9
SOK1YDR006C HOP1P20050 605 aa3.18□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 179 ms