RNA–Protein interactions for RNA: YDL225W

SHS1, Transcript of Component of the septin ring that is required for cytokinesis, yeastyeast

Gene SHS1, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHS1YDL225W NCS6P53088 359 aa3.91□□□□□ -1.78
SHS1YDL225W MET13P53128 600 aa3.91□□□□□ -1.78
SHS1YDL225W DUS1P53759 423 aaKnown RBP3.91□□□□□ -1.78
SHS1YDL225W CRR1Q05790 422 aa3.91□□□□□ -1.78
SHS1YDL225W THI21Q08975 551 aa3.91□□□□□ -1.78
SHS1YDL225W HOG1P32485 435 aa3.9□□□□□ -1.78
SHS1YDL225W STE14P32584 239 aa3.9□□□□□ -1.78
SHS1YDL225W THI80P35202 319 aa3.9□□□□□ -1.78
SHS1YDL225W YKL222CP35995 705 aa3.9□□□□□ -1.78
SHS1YDL225W CTF8P38877 133 aa3.9□□□□□ -1.78
SHS1YDL225W SDA1P53313 767 aaKnown RBP3.9□□□□□ -1.78
SHS1YDL225W NHX1Q04121 633 aa3.9□□□□□ -1.78
SHS1YDL225W YLR224WQ05947 369 aa3.9□□□□□ -1.78
SHS1YDL225W PRE10P21242 288 aaKnown RBP RIP-Chip data3.9□□□□□ -1.79not detected
SHS1YDL225W YHR078WP38799 552 aa3.9□□□□□ -1.79
SHS1YDL225W SSY5P47002 699 aa3.9□□□□□ -1.79
SHS1YDL225W ZIP2P53061 704 aa3.9□□□□□ -1.79
SHS1YDL225W AIM14P53109 570 aa3.9□□□□□ -1.79
SHS1YDL225W THI73Q07904 523 aa3.9□□□□□ -1.79
SHS1YDL225W GIN4Q12263 1142 aa3.9□□□□□ -1.79
SHS1YDL225W LST4P34239 828 aa3.89□□□□□ -1.79
SHS1YDL225W PCM1P38628 557 aaKnown RBP3.89□□□□□ -1.79
SHS1YDL225W MGS1P40151 587 aa3.89□□□□□ -1.79
SHS1YDL225W YGL081WP53156 320 aa3.89□□□□□ -1.79
SHS1YDL225W COG8Q04632 607 aa3.89□□□□□ -1.79
SHS1YDL225W YDR338CQ05497 695 aa3.89□□□□□ -1.79
SHS1YDL225W ATG33Q06485 197 aa3.89□□□□□ -1.79
SHS1YDL225W NPC2Q12408 173 aa3.89□□□□□ -1.79
SHS1YDL225W KCS1Q12494 1050 aa3.89□□□□□ -1.79
SHS1YDL225W HSL7P38274 827 aa3.88□□□□□ -1.79
SHS1YDL225W YFL052WP43551 465 aa3.88□□□□□ -1.79
SHS1YDL225W NPY1P53164 384 aa3.88□□□□□ -1.79
SHS1YDL225W ESC8Q08119 714 aa3.88□□□□□ -1.79
SHS1YDL225W GUP2Q08929 609 aa3.88□□□□□ -1.79
SHS1YDL225W MIH1P23748 554 aa3.87□□□□□ -1.79
SHS1YDL225W TSR4P25040 408 aa3.87□□□□□ -1.79
SHS1YDL225W TYS1P36421 394 aaKnown RBP3.87□□□□□ -1.79
SHS1YDL225W SAK1P38990 1142 aa3.87□□□□□ -1.79
SHS1YDL225W MSS4P38994 779 aa3.87□□□□□ -1.79
SHS1YDL225W MPT5P39016 859 aaKnown RBP RIP-Chip data3.87□□□□□ -1.79not detected
SHS1YDL225W UBP12P39538 1254 aa3.87□□□□□ -1.79
SHS1YDL225W PZF1P39933 429 aa3.87□□□□□ -1.79
SHS1YDL225W DOT6P40059 670 aaKnown RBP3.87□□□□□ -1.79
SHS1YDL225W PMT3P47190 753 aa3.87□□□□□ -1.79
SHS1YDL225W UBC9P50623 157 aaPredicted RBP3.87□□□□□ -1.79
SHS1YDL225W SWM1Q12379 170 aa3.87□□□□□ -1.79
SHS1YDL225W Q0142Q9ZZW4 58 aa3.87□□□□□ -1.79
SHS1YDL225W SSD1P24276 1250 aaKnown RBP RIP-Chip data3.87□□□□□ -1.79not detected
SHS1YDL225W SEC21P32074 935 aaKnown RBP3.87□□□□□ -1.79
SHS1YDL225W GRX4P32642 244 aa3.87□□□□□ -1.79
SHS1YDL225W VHR1P40522 640 aa3.87□□□□□ -1.79
SHS1YDL225W BNA2P47125 453 aa3.87□□□□□ -1.79
SHS1YDL225W UME1Q03010 460 aa3.87□□□□□ -1.79
SHS1YDL225W GUD1Q07729 489 aa3.87□□□□□ -1.79
SHS1YDL225W HMG1P12683 1054 aa3.86□□□□□ -1.79
SHS1YDL225W KAR4P25583 335 aa3.86□□□□□ -1.79
SHS1YDL225W YKR051WP36142 418 aa3.86□□□□□ -1.79
SHS1YDL225W FLR1P38124 548 aa3.86□□□□□ -1.79
SHS1YDL225W YGR237CP50089 785 aa3.86□□□□□ -1.79
SHS1YDL225W SLU7Q02775 382 aaKnown RBP3.86□□□□□ -1.79
SHS1YDL225W MUS81Q04149 632 aaPredicted RBP3.86□□□□□ -1.79
SHS1YDL225W RPN7Q06103 429 aaKnown RBP3.86□□□□□ -1.79
SHS1YDL225W TMA10Q06177 86 aa3.86□□□□□ -1.79
SHS1YDL225W URN1Q06525 465 aaKnown RBP3.86□□□□□ -1.79
SHS1YDL225W PEX19Q07418 342 aa3.86□□□□□ -1.79
SHS1YDL225W YLR149CQ99296 730 aa3.86□□□□□ -1.79
SHS1YDL225W TUB3P09734 445 aaKnown RBP3.85□□□□□ -1.79
SHS1YDL225W CAD1P24813 409 aaKnown RBP3.85□□□□□ -1.79
SHS1YDL225W CCR4P31384 837 aaKnown RBP3.85□□□□□ -1.79
SHS1YDL225W YEN1P40028 759 aa3.85□□□□□ -1.79
SHS1YDL225W MTR3P48240 250 aaPredicted RBP3.85□□□□□ -1.79
SHS1YDL225W MNN10P50108 393 aaKnown RBP3.85□□□□□ -1.79
SHS1YDL225W MCM6P53091 1017 aaKnown RBP3.85□□□□□ -1.79
SHS1YDL225W ASI2P53895 289 aa3.85□□□□□ -1.79
SHS1YDL225W NUP145P49687 1317 aa3.85□□□□□ -1.79
SHS1YDL225W PRP4P20053 465 aaKnown RBP3.84□□□□□ -1.79
SHS1YDL225W CKB2P38930 258 aa3.84□□□□□ -1.79
SHS1YDL225W GIP4P39732 760 aa3.84□□□□□ -1.79
SHS1YDL225W PFA3P42836 336 aa3.84□□□□□ -1.79
SHS1YDL225W YJR096WP47137 282 aa3.84□□□□□ -1.79
SHS1YDL225W EXG2P52911 562 aa3.84□□□□□ -1.79
SHS1YDL225W GPG1P53130 126 aa3.84□□□□□ -1.79
SHS1YDL225W PKH1Q03407 766 aa3.84□□□□□ -1.79
SHS1YDL225W ASM4Q05166 528 aa3.84□□□□□ -1.79
SHS1YDL225W STE11P23561 717 aa3.84□□□□□ -1.8
SHS1YDL225W YCR015CP25616 317 aa3.84□□□□□ -1.8
SHS1YDL225W PRP19P32523 503 aaKnown RBP3.84□□□□□ -1.8
SHS1YDL225W YKR018CP36114 725 aa3.84□□□□□ -1.8
SHS1YDL225W MTQ2Q03920 221 aaPredicted RBP3.84□□□□□ -1.8
SHS1YDL225W FAP7Q12055 197 aaPredicted RBP3.84□□□□□ -1.8
SHS1YDL225W GPR1Q12361 961 aa3.84□□□□□ -1.8
SHS1YDL225W NGG1P32494 702 aa3.83□□□□□ -1.8
SHS1YDL225W CTF13P35203 478 aa3.83□□□□□ -1.8
SHS1YDL225W MNN4P36044 1178 aa3.83□□□□□ -1.8
SHS1YDL225W MIP6P38760 659 aaKnown RBP3.83□□□□□ -1.8
SHS1YDL225W RPP1P38786 293 aa3.83□□□□□ -1.8
SHS1YDL225W CLU1Q03690 1277 aaKnown RBP3.83□□□□□ -1.8
SHS1YDL225W DCG1P32460 244 aa3.82□□□□□ -1.8
SHS1YDL225W SHM2P37291 469 aaKnown RBP3.82□□□□□ -1.8
SHS1YDL225W GPP1P41277 250 aaKnown RBP3.82□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 145.4 ms