RNA–Protein interactions for RNA: YCR044C

PER1, Transcript of Protein of the endoplasmic reticulum, yeast

Gene PER1, Length 1,074 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PER1	YCR044C	YOL087C	Q99247	1116 aa		4.82	□□□□□ -1.64
PER1	YCR044C	PPR1	P07272	904 aa	Predicted RBP	4.81	□□□□□ -1.64
PER1	YCR044C	OM45	P16547	393 aa		4.81	□□□□□ -1.64
PER1	YCR044C	SRP54	P20424	541 aa	Known RBP	4.81	□□□□□ -1.64
PER1	YCR044C	SAS3	P34218	831 aa		4.81	□□□□□ -1.64
PER1	YCR044C	UGA2	P38067	497 aa		4.81	□□□□□ -1.64
PER1	YCR044C	PFF1	P38244	976 aa		4.81	□□□□□ -1.64
PER1	YCR044C	ERG7	P38604	731 aa		4.81	□□□□□ -1.64
PER1	YCR044C	SMC2	P38989	1170 aa	Known RBP	4.81	□□□□□ -1.64
PER1	YCR044C	SDA1	P53313	767 aa	Known RBP	4.81	□□□□□ -1.64
PER1	YCR044C	MDM1	Q01846	1127 aa		4.81	□□□□□ -1.64
PER1	YCR044C	UME1	Q03010	460 aa		4.81	□□□□□ -1.64
PER1	YCR044C	POB3	Q04636	552 aa	Known RBP	4.81	□□□□□ -1.64
PER1	YCR044C	YMR074C	Q04773	145 aa		4.81	□□□□□ -1.64
PER1	YCR044C	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.81	□□□□□ -1.64	not detected
PER1	YCR044C	DAS2	Q12084	232 aa		4.81	□□□□□ -1.64
PER1	YCR044C	TUS1	Q06412	1307 aa		4.8	□□□□□ -1.64
PER1	YCR044C	TUF1	P02992	437 aa	Known RBP	4.8	□□□□□ -1.64
PER1	YCR044C	TOP1	P04786	769 aa		4.8	□□□□□ -1.64
PER1	YCR044C	NUC1	P08466	329 aa		4.8	□□□□□ -1.64
PER1	YCR044C	RPC53	P25441	422 aa		4.8	□□□□□ -1.64
PER1	YCR044C	SEC20	P28791	383 aa		4.8	□□□□□ -1.64
PER1	YCR044C	YKL091C	P33324	310 aa	Known RBP	4.8	□□□□□ -1.64
PER1	YCR044C	PET10	P36139	283 aa		4.8	□□□□□ -1.64
PER1	YCR044C	RGD1	P38339	666 aa		4.8	□□□□□ -1.64
PER1	YCR044C	TDA3	P38758	523 aa		4.8	□□□□□ -1.64
PER1	YCR044C	YER156C	P40093	338 aa	Known RBP	4.8	□□□□□ -1.64
PER1	YCR044C	ATG32	P40458	529 aa		4.8	□□□□□ -1.64
PER1	YCR044C	MAD1	P40957	749 aa		4.8	□□□□□ -1.64
PER1	YCR044C	DSE4	P53753	1117 aa		4.8	□□□□□ -1.64
PER1	YCR044C	FOL1	P53848	824 aa		4.8	□□□□□ -1.64
PER1	YCR044C	BNI5	P53890	448 aa	Known RBP	4.8	□□□□□ -1.64
PER1	YCR044C	ERO1	Q03103	563 aa		4.8	□□□□□ -1.64
PER1	YCR044C	PRP42	Q03776	544 aa	Known RBP	4.8	□□□□□ -1.64
PER1	YCR044C	CSM3	Q04659	317 aa		4.8	□□□□□ -1.64
PER1	YCR044C	SMD2	Q06217	110 aa	Known RBP	4.8	□□□□□ -1.64
PER1	YCR044C	SPO75	Q07798	868 aa		4.8	□□□□□ -1.64
PER1	YCR044C	YOL075C	Q08234	1294 aa		4.8	□□□□□ -1.64
PER1	YCR044C	KEL3	Q08979	651 aa	Predicted RBP	4.8	□□□□□ -1.64
PER1	YCR044C	CWC2	Q12046	339 aa	Predicted RBP	4.8	□□□□□ -1.64
PER1	YCR044C	RUD3	Q12234	484 aa	Known RBP	4.8	□□□□□ -1.64
PER1	YCR044C	CDC8	P00572	216 aa		4.79	□□□□□ -1.64
PER1	YCR044C	TOM70	P07213	617 aa	Known RBP	4.79	□□□□□ -1.64
PER1	YCR044C	SSB1	P11484	613 aa	Known RBP	4.79	□□□□□ -1.64
PER1	YCR044C	ISY1	P21374	235 aa	Predicted RBP	4.79	□□□□□ -1.64
PER1	YCR044C	APL1	P27351	700 aa		4.79	□□□□□ -1.64
PER1	YCR044C	RPC25	P35718	212 aa		4.79	□□□□□ -1.64
PER1	YCR044C	GIP2	P40036	548 aa		4.79	□□□□□ -1.64
PER1	YCR044C	SSB2	P40150	613 aa	Known RBP	4.79	□□□□□ -1.64
PER1	YCR044C	PXA1	P41909	870 aa		4.79	□□□□□ -1.64
PER1	YCR044C	IES1	P43579	692 aa		4.79	□□□□□ -1.64
PER1	YCR044C	MIC19	P43594	170 aa		4.79	□□□□□ -1.64
PER1	YCR044C	LYS4	P49367	693 aa	Predicted RBP	4.79	□□□□□ -1.64
PER1	YCR044C	CBK1	P53894	756 aa		4.79	□□□□□ -1.64
PER1	YCR044C	VPS30	Q02948	557 aa		4.79	□□□□□ -1.64
PER1	YCR044C	YMR102C	Q03177	834 aa		4.79	□□□□□ -1.64
PER1	YCR044C	VTI1	Q04338	217 aa		4.79	□□□□□ -1.64
PER1	YCR044C	SOV1	Q04748	898 aa		4.79	□□□□□ -1.64
PER1	YCR044C	SKG3	Q06315	1026 aa		4.79	□□□□□ -1.64
PER1	YCR044C	GSC2	P40989	1895 aa		4.79	□□□□□ -1.64
PER1	YCR044C	CYC7	P00045	113 aa		4.78	□□□□□ -1.64
PER1	YCR044C	CAF20	P12962	161 aa	Known RBP	4.78	□□□□□ -1.64
PER1	YCR044C	PRE8	P23639	250 aa		4.78	□□□□□ -1.64
PER1	YCR044C	SRO9	P25567	434 aa	Known RBP	4.78	□□□□□ -1.64
PER1	YCR044C	CDC60	P26637	1090 aa	Known RBP	4.78	□□□□□ -1.64
PER1	YCR044C	PAP1	P29468	568 aa	Known RBP	4.78	□□□□□ -1.64
PER1	YCR044C	ECM32	P32644	1121 aa	Known RBP	4.78	□□□□□ -1.64
PER1	YCR044C	GCG1	P32656	232 aa	Known RBP	4.78	□□□□□ -1.64
PER1	YCR044C	SLD2	P34252	453 aa		4.78	□□□□□ -1.64
PER1	YCR044C	GDT1	P38301	280 aa	Predicted RBP	4.78	□□□□□ -1.64
PER1	YCR044C	CIT3	P43635	486 aa		4.78	□□□□□ -1.64
PER1	YCR044C	RPS0B	P46654	252 aa	Known RBP	4.78	□□□□□ -1.64
PER1	YCR044C	CCM1	P48237	864 aa	Predicted RBP	4.78	□□□□□ -1.64
PER1	YCR044C	ASE1	P50275	885 aa		4.78	□□□□□ -1.64
PER1	YCR044C	ENV11	P53246	860 aa		4.78	□□□□□ -1.64
PER1	YCR044C	BTN2	P53286	410 aa		4.78	□□□□□ -1.64
PER1	YCR044C	SOK2	P53438	785 aa	Predicted RBP	4.78	□□□□□ -1.64
PER1	YCR044C	ADY4	Q05955	493 aa		4.78	□□□□□ -1.64
PER1	YCR044C	STE23	Q06010	1027 aa		4.78	□□□□□ -1.64
PER1	YCR044C	ACK1	Q07622	623 aa	Predicted RBP	4.78	□□□□□ -1.64
PER1	YCR044C	TCO89	Q08921	799 aa		4.78	□□□□□ -1.64
PER1	YCR044C	PCL8	Q08966	492 aa		4.78	□□□□□ -1.64
PER1	YCR044C	REC8	Q12188	680 aa		4.78	□□□□□ -1.64
PER1	YCR044C	SMC6	Q12749	1114 aa		4.78	□□□□□ -1.64
PER1	YCR044C	YEL076C-A	P0CX16	216 aa		4.77	□□□□□ -1.65
PER1	YCR044C	YLR464W	P0CX17	216 aa		4.77	□□□□□ -1.65
PER1	YCR044C	TIF1	P10081	395 aa	Known RBP	4.77	□□□□□ -1.65
PER1	YCR044C	TUP1	P16649	713 aa		4.77	□□□□□ -1.65
PER1	YCR044C	SRM1	P21827	482 aa		4.77	□□□□□ -1.65
PER1	YCR044C	RET1	P22276	1149 aa	Known RBP	4.77	□□□□□ -1.65
PER1	YCR044C	PHO87	P25360	923 aa		4.77	□□□□□ -1.65
PER1	YCR044C	RNQ1	P25367	405 aa		4.77	□□□□□ -1.65
PER1	YCR044C	MED8	P38304	223 aa		4.77	□□□□□ -1.65
PER1	YCR044C	ECM1	P39715	212 aa		4.77	□□□□□ -1.65
PER1	YCR044C	UBP5	P39944	805 aa		4.77	□□□□□ -1.65
PER1	YCR044C	YEL076C	P39971	216 aa		4.77	□□□□□ -1.65
PER1	YCR044C	NUP82	P40368	713 aa		4.77	□□□□□ -1.65
PER1	YCR044C	KTR7	P40504	517 aa		4.77	□□□□□ -1.65
PER1	YCR044C	RPL34B	P40525	121 aa	Known RBP	4.77	□□□□□ -1.65
PER1	YCR044C	SPO74	P45819	413 aa		4.77	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms