RNA–Protein interactions for RNA: YBR054W

YRO2, Transcript of Protein of unknown function with similarity to archaeal rhodopsins, yeast

Gene YRO2, Length 1,035 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YRO2	YBR054W	PEX19	Q07418	342 aa		4.3	□□□□□ -1.72
YRO2	YBR054W	SWM1	Q12379	170 aa		4.3	□□□□□ -1.72
YRO2	YBR054W	DIF1	O13577	133 aa		4.29	□□□□□ -1.72
YRO2	YBR054W	CDC9	P04819	755 aa		4.29	□□□□□ -1.72
YRO2	YBR054W	TUB3	P09734	445 aa	Known RBP	4.29	□□□□□ -1.72
YRO2	YBR054W	MEF1	P25039	761 aa		4.29	□□□□□ -1.72
YRO2	YBR054W	TRM2	P33753	639 aa		4.29	□□□□□ -1.72
YRO2	YBR054W	PEX6	P33760	1030 aa		4.29	□□□□□ -1.72
YRO2	YBR054W	DEF1	P35732	738 aa	Known RBP	4.29	□□□□□ -1.72
YRO2	YBR054W	NMD2	P38798	1089 aa	Known RBP	4.29	□□□□□ -1.72
YRO2	YBR054W	VBA3	P25594	458 aa		4.28	□□□□□ -1.72
YRO2	YBR054W	PMI40	P29952	429 aa	Known RBP	4.28	□□□□□ -1.72
YRO2	YBR054W	STO1	P34160	861 aa	Known RBP	4.28	□□□□□ -1.72
YRO2	YBR054W	CTF13	P35203	478 aa		4.28	□□□□□ -1.72
YRO2	YBR054W	MCD4	P36051	919 aa		4.28	□□□□□ -1.72
YRO2	YBR054W	MSS4	P38994	779 aa		4.28	□□□□□ -1.72
YRO2	YBR054W	DSS1	P39112	969 aa		4.28	□□□□□ -1.72
YRO2	YBR054W	SHR5	P41912	237 aa		4.28	□□□□□ -1.72
YRO2	YBR054W	CAF16	P43569	289 aa		4.28	□□□□□ -1.72
YRO2	YBR054W	SSY5	P47002	699 aa		4.28	□□□□□ -1.72
YRO2	YBR054W	ALY2	P47029	1046 aa		4.28	□□□□□ -1.72
YRO2	YBR054W	ASI2	P53895	289 aa		4.28	□□□□□ -1.72
YRO2	YBR054W	NTG2	Q08214	380 aa		4.28	□□□□□ -1.72
YRO2	YBR054W	TUB2	P02557	457 aa	Known RBP	4.27	□□□□□ -1.73
YRO2	YBR054W	PRP4	P20053	465 aa	Known RBP	4.27	□□□□□ -1.73
YRO2	YBR054W	PZF1	P39933	429 aa		4.27	□□□□□ -1.73
YRO2	YBR054W	VHR1	P40522	640 aa		4.27	□□□□□ -1.73
YRO2	YBR054W	BUL1	P48524	976 aa		4.27	□□□□□ -1.73
YRO2	YBR054W	ZIP2	P53061	704 aa		4.27	□□□□□ -1.73
YRO2	YBR054W	ERG5	P54781	538 aa		4.27	□□□□□ -1.73
YRO2	YBR054W	GSF2	Q04697	403 aa	Known RBP	4.27	□□□□□ -1.73
YRO2	YBR054W	URN1	Q06525	465 aa	Known RBP	4.27	□□□□□ -1.73
YRO2	YBR054W	TRM11	Q12463	433 aa		4.27	□□□□□ -1.73
YRO2	YBR054W	TRP4	P07285	380 aa	Predicted RBP	4.26	□□□□□ -1.73
YRO2	YBR054W	HRR25	P29295	494 aa	Known RBP	4.26	□□□□□ -1.73
YRO2	YBR054W	SAK1	P38990	1142 aa		4.26	□□□□□ -1.73
YRO2	YBR054W	SNP1	Q00916	300 aa	Predicted RBP	4.26	□□□□□ -1.73
YRO2	YBR054W	MUS81	Q04149	632 aa	Predicted RBP	4.26	□□□□□ -1.73
YRO2	YBR054W	YDR338C	Q05497	695 aa		4.26	□□□□□ -1.73
YRO2	YBR054W	AIM39	Q08223	395 aa		4.26	□□□□□ -1.73
YRO2	YBR054W	SRD1	P09007	221 aa		4.25	□□□□□ -1.73
YRO2	YBR054W	EFT1	P32324	842 aa	Known RBP	4.25	□□□□□ -1.73
YRO2	YBR054W	PFA3	P42836	336 aa		4.25	□□□□□ -1.73
YRO2	YBR054W	PKH1	Q03407	766 aa		4.25	□□□□□ -1.73
YRO2	YBR054W	CRR1	Q05790	422 aa		4.25	□□□□□ -1.73
YRO2	YBR054W	YLR415C	O13578	112 aa		4.24	□□□□□ -1.73
YRO2	YBR054W	NGG1	P32494	702 aa		4.24	□□□□□ -1.73
YRO2	YBR054W	YEL1	P34225	687 aa		4.24	□□□□□ -1.73
YRO2	YBR054W	RPP1	P38786	293 aa		4.24	□□□□□ -1.73
YRO2	YBR054W	RPN10	P38886	268 aa	Known RBP	4.24	□□□□□ -1.73
YRO2	YBR054W	AIM21	P40563	679 aa		4.24	□□□□□ -1.73
YRO2	YBR054W	MSE1	P48525	536 aa		4.24	□□□□□ -1.73
YRO2	YBR054W	SUN4	P53616	420 aa		4.24	□□□□□ -1.73
YRO2	YBR054W	PUS9	Q12069	462 aa		4.24	□□□□□ -1.73
YRO2	YBR054W	GPR1	Q12361	961 aa		4.24	□□□□□ -1.73
YRO2	YBR054W	ERG4	P25340	473 aa		4.23	□□□□□ -1.73
YRO2	YBR054W	PCL2	P25693	308 aa		4.23	□□□□□ -1.73
YRO2	YBR054W	HOG1	P32485	435 aa		4.23	□□□□□ -1.73
YRO2	YBR054W	KTR4	P38131	464 aa		4.23	□□□□□ -1.73
YRO2	YBR054W	MNN1	P39106	762 aa		4.23	□□□□□ -1.73
YRO2	YBR054W	BNA2	P47125	453 aa		4.23	□□□□□ -1.73
YRO2	YBR054W	MTR3	P48240	250 aa	Predicted RBP	4.23	□□□□□ -1.73
YRO2	YBR054W	KIN4	Q01919	800 aa		4.23	□□□□□ -1.73
YRO2	YBR054W	COG8	Q04632	607 aa		4.23	□□□□□ -1.73
YRO2	YBR054W	NOP14	Q99207	810 aa	Known RBP	4.23	□□□□□ -1.73
YRO2	YBR054W	RAD18	P10862	487 aa		4.22	□□□□□ -1.73
YRO2	YBR054W	YFL052W	P43551	465 aa		4.22	□□□□□ -1.73
YRO2	YBR054W	MRPS35	P53292	345 aa		4.22	□□□□□ -1.73
YRO2	YBR054W	TFB2	Q02939	513 aa		4.22	□□□□□ -1.73
YRO2	YBR054W	NHX1	Q04121	633 aa		4.22	□□□□□ -1.73
YRO2	YBR054W	UTP14	Q04500	899 aa	Known RBP	4.22	□□□□□ -1.73
YRO2	YBR054W	ASM4	Q05166	528 aa		4.22	□□□□□ -1.73
YRO2	YBR054W	YLR040C	Q07988	224 aa		4.22	□□□□□ -1.73
YRO2	YBR054W	MIH1	P23748	554 aa		4.21	□□□□□ -1.74
YRO2	YBR054W	HSL7	P38274	827 aa		4.21	□□□□□ -1.74
YRO2	YBR054W	SIC1	P38634	284 aa		4.21	□□□□□ -1.74
YRO2	YBR054W	FKH2	P41813	862 aa		4.21	□□□□□ -1.74
YRO2	YBR054W	NPY1	P53164	384 aa		4.21	□□□□□ -1.74
YRO2	YBR054W	YNL193W	P53870	558 aa		4.21	□□□□□ -1.74
YRO2	YBR054W	NRG1	Q03125	231 aa		4.21	□□□□□ -1.74
YRO2	YBR054W	DLT1	Q04216	342 aa		4.21	□□□□□ -1.74
YRO2	YBR054W	YLR001C	Q07895	862 aa		4.21	□□□□□ -1.74
YRO2	YBR054W	YLR149C	Q99296	730 aa		4.21	□□□□□ -1.74
YRO2	YBR054W	MET3	P08536	511 aa		4.2	□□□□□ -1.74
YRO2	YBR054W	RPL8A	P17076	256 aa	Known RBP	4.2	□□□□□ -1.74
YRO2	YBR054W	SUL1	P38359	859 aa		4.2	□□□□□ -1.74
YRO2	YBR054W	CHS7	P38843	316 aa		4.2	□□□□□ -1.74
YRO2	YBR054W	TRM13	Q12383	476 aa		4.2	□□□□□ -1.74
YRO2	YBR054W	CAF20	P12962	161 aa	Known RBP	4.19	□□□□□ -1.74
YRO2	YBR054W	SFL1	P20134	766 aa		4.19	□□□□□ -1.74
YRO2	YBR054W	SFP1	P32432	683 aa		4.19	□□□□□ -1.74
YRO2	YBR054W	YKR051W	P36142	418 aa		4.19	□□□□□ -1.74
YRO2	YBR054W	YBR259W	P38338	688 aa		4.19	□□□□□ -1.74
YRO2	YBR054W	ELO3	P40319	345 aa		4.19	□□□□□ -1.74
YRO2	YBR054W	RNT1	Q02555	471 aa		4.19	□□□□□ -1.74
YRO2	YBR054W	ATG33	Q06485	197 aa		4.19	□□□□□ -1.74
YRO2	YBR054W	YOL073C	Q08232	322 aa		4.19	□□□□□ -1.74
YRO2	YBR054W	PNS1	Q12412	539 aa		4.19	□□□□□ -1.74
YRO2	YBR054W	Q0142	Q9ZZW4	58 aa		4.19	□□□□□ -1.74
YRO2	YBR054W	YKR018C	P36114	725 aa		4.18	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 36.3 ms