RNA–Protein interactions for RNA: YBL006C

LDB7, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene LDB7, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB7YBL006C HCR1Q05775 265 aaKnown RBP7.53□□□□□ -1.2
LDB7YBL006C PSR2Q07949 397 aa7.53□□□□□ -1.2
LDB7YBL006C REC8Q12188 680 aa7.53□□□□□ -1.2
LDB7YBL006C APM4Q99186 491 aa7.53□□□□□ -1.2
LDB7YBL006C TAF13P11747 167 aa7.52□□□□□ -1.21
LDB7YBL006C VMA1P17255 1071 aaKnown RBP7.52□□□□□ -1.21
LDB7YBL006C DAL7P21826 554 aa7.52□□□□□ -1.21
LDB7YBL006C PGS1P25578 521 aa7.52□□□□□ -1.21
LDB7YBL006C BMH1P29311 267 aaKnown RBP7.52□□□□□ -1.21
LDB7YBL006C HIR1P32479 840 aa7.52□□□□□ -1.21
LDB7YBL006C MNR2P35724 969 aa7.52□□□□□ -1.21
LDB7YBL006C YHR054CP38780 354 aa7.52□□□□□ -1.21
LDB7YBL006C BIM1P40013 344 aa7.52□□□□□ -1.21
LDB7YBL006C PML39Q03760 334 aa7.52□□□□□ -1.21
LDB7YBL006C CTF3Q12748 733 aa7.52□□□□□ -1.21
LDB7YBL006C BEM2P39960 2167 aaKnown RBP7.52□□□□□ -1.21
LDB7YBL006C SEN1Q00416 2231 aaKnown RBP7.51□□□□□ -1.21
LDB7YBL006C GAL80P04387 435 aa7.51□□□□□ -1.21
LDB7YBL006C MAS1P10507 462 aa7.51□□□□□ -1.21
LDB7YBL006C HMG2P12684 1045 aa7.51□□□□□ -1.21
LDB7YBL006C SPO11P23179 398 aa7.51□□□□□ -1.21
LDB7YBL006C PEP7P32609 515 aa7.51□□□□□ -1.21
LDB7YBL006C SNF7P39929 240 aaKnown RBP7.51□□□□□ -1.21
LDB7YBL006C NPP2P39997 493 aa7.51□□□□□ -1.21
LDB7YBL006C ADA2Q02336 434 aa7.51□□□□□ -1.21
LDB7YBL006C TCO89Q08921 799 aa7.51□□□□□ -1.21
LDB7YBL006C ASP3-2P0CX77 362 aa7.5□□□□□ -1.21
LDB7YBL006C ASP3-3P0CX78 362 aa7.5□□□□□ -1.21
LDB7YBL006C ASP3-4P0CX79 362 aa7.5□□□□□ -1.21
LDB7YBL006C ASP3-1P0CZ17 362 aa7.5□□□□□ -1.21
LDB7YBL006C BIK1P11709 440 aa7.5□□□□□ -1.21
LDB7YBL006C PUP3P25451 205 aaKnown RBP7.5□□□□□ -1.21
LDB7YBL006C TRK2P28584 889 aa7.5□□□□□ -1.21
LDB7YBL006C MRF1P30775 413 aaPredicted RBP7.5□□□□□ -1.21
LDB7YBL006C PTC4P38089 393 aa7.5□□□□□ -1.21
LDB7YBL006C RFT1P38206 574 aaPredicted RBP7.5□□□□□ -1.21
LDB7YBL006C UBP5P39944 805 aa7.5□□□□□ -1.21
LDB7YBL006C SIP5P40210 489 aaKnown RBP7.5□□□□□ -1.21
LDB7YBL006C LCB2P40970 561 aa7.5□□□□□ -1.21
LDB7YBL006C YFL034WP43564 1073 aa7.5□□□□□ -1.21
LDB7YBL006C FYV8P46949 817 aaKnown RBP7.5□□□□□ -1.21
LDB7YBL006C UTP14Q04500 899 aaKnown RBP7.5□□□□□ -1.21
LDB7YBL006C CDD1Q06549 142 aa7.5□□□□□ -1.21
LDB7YBL006C CDC15P27636 974 aa7.49□□□□□ -1.21
LDB7YBL006C MUD1P32605 298 aaKnown RBP7.49□□□□□ -1.21
LDB7YBL006C YIR014WP40570 242 aa7.49□□□□□ -1.21
LDB7YBL006C POL31P46957 487 aa7.49□□□□□ -1.21
LDB7YBL006C BFA1P47113 574 aa7.49□□□□□ -1.21
LDB7YBL006C CCM1P48237 864 aaPredicted RBP7.49□□□□□ -1.21
LDB7YBL006C HSH155P49955 971 aaKnown RBP7.49□□□□□ -1.21
LDB7YBL006C SLG1P54867 378 aa7.49□□□□□ -1.21
LDB7YBL006C HRQ1Q05549 1077 aa7.49□□□□□ -1.21
LDB7YBL006C TPK1P06244 397 aa7.48□□□□□ -1.21
LDB7YBL006C SSB1P11484 613 aaKnown RBP7.48□□□□□ -1.21
LDB7YBL006C PDE1P22434 369 aa7.48□□□□□ -1.21
LDB7YBL006C VPS3P23643 1011 aa7.48□□□□□ -1.21
LDB7YBL006C COY1P34237 679 aa7.48□□□□□ -1.21
LDB7YBL006C LEO1P38439 464 aa7.48□□□□□ -1.21
LDB7YBL006C ARP1P38696 384 aa7.48□□□□□ -1.21
LDB7YBL006C SSB2P40150 613 aaKnown RBP7.48□□□□□ -1.21
LDB7YBL006C LSB6P42951 607 aa7.48□□□□□ -1.21
LDB7YBL006C LEE1Q02799 301 aaKnown RBP7.48□□□□□ -1.21
LDB7YBL006C DON1Q05610 365 aa7.48□□□□□ -1.21
LDB7YBL006C FMP25Q08023 583 aa7.48□□□□□ -1.21
LDB7YBL006C YPL216WQ08964 1102 aa7.48□□□□□ -1.21
LDB7YBL006C SGT2Q12118 346 aaKnown RBP7.48□□□□□ -1.21
LDB7YBL006C KGD2P19262 463 aaPredicted RBP7.47□□□□□ -1.21
LDB7YBL006C RAM1P22007 431 aa7.47□□□□□ -1.21
LDB7YBL006C SLA2P33338 968 aa7.47□□□□□ -1.21
LDB7YBL006C TAF1P46677 1066 aa7.47□□□□□ -1.21
LDB7YBL006C BIO5P53744 561 aaKnown RBP7.47□□□□□ -1.21
LDB7YBL006C NOP13P53883 403 aaKnown RBP RIP-Chip data7.47□□□□□ -1.21not detected
LDB7YBL006C LEA1Q08963 238 aaPredicted RBP7.47□□□□□ -1.21
LDB7YBL006C SPE3Q12074 293 aaKnown RBP7.47□□□□□ -1.21
LDB7YBL006C PEX34P25584 144 aa7.46□□□□□ -1.22
LDB7YBL006C DAS1P47005 663 aa7.46□□□□□ -1.22
LDB7YBL006C NSE5Q03718 556 aa7.46□□□□□ -1.22
LDB7YBL006C TIF35Q04067 274 aaKnown RBP7.46□□□□□ -1.22
LDB7YBL006C MED1Q12321 566 aa7.46□□□□□ -1.22
LDB7YBL006C AGP2P38090 596 aa7.45□□□□□ -1.22
LDB7YBL006C TBS1P38114 1094 aa7.45□□□□□ -1.22
LDB7YBL006C SIF2P38262 535 aa7.45□□□□□ -1.22
LDB7YBL006C TOS3P43637 560 aa7.45□□□□□ -1.22
LDB7YBL006C TIM8P57744 87 aa7.45□□□□□ -1.22
LDB7YBL006C PEX19Q07418 342 aa7.45□□□□□ -1.22
LDB7YBL006C MLH2Q07980 695 aa7.45□□□□□ -1.22
LDB7YBL006C RPL22AP05749 121 aaKnown RBP7.44□□□□□ -1.22
LDB7YBL006C HIS5P07172 385 aa7.44□□□□□ -1.22
LDB7YBL006C NAT1P12945 854 aaKnown RBP7.44□□□□□ -1.22
LDB7YBL006C OXP1P28273 1286 aa7.44□□□□□ -1.22
LDB7YBL006C PIN4P34217 668 aaKnown RBP RIP-Chip data7.44□□□□□ -1.22not detected
LDB7YBL006C HXT5P38695 592 aa7.44□□□□□ -1.22
LDB7YBL006C SFB3P38810 929 aa7.44□□□□□ -1.22
LDB7YBL006C FTR1P40088 404 aa7.44□□□□□ -1.22
LDB7YBL006C TLG2Q08144 397 aa7.44□□□□□ -1.22
LDB7YBL006C HRT3Q12347 344 aa7.44□□□□□ -1.22
LDB7YBL006C CHS1P08004 1131 aa7.43□□□□□ -1.22
LDB7YBL006C PCT1P13259 424 aa7.43□□□□□ -1.22
LDB7YBL006C CHS2P14180 963 aa7.43□□□□□ -1.22
LDB7YBL006C ISF1P32488 338 aa7.43□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 53.8 ms