RNA–Protein interactions for RNA: ENST00000485987.1

LMO7-211, Transcript of LIM domain 7, humanhuman

TSL 5

Gene LMO7, Length 1,087 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-211ENST00000485987 DDB1Q16531 1140 aa11.14□□□□□ -0.63
LMO7-211ENST00000485987 C1orf141Q5JVX7 400 aa11.14□□□□□ -0.63
LMO7-211ENST00000485987 NUDT12Q9BQG2 462 aa11.14□□□□□ -0.63
LMO7-211ENST00000485987 ATRNO75882 1429 aa11.14□□□□□ -0.63
LMO7-211ENST00000485987 PEAK1Q9H792 1746 aa11.14□□□□□ -0.63
LMO7-211ENST00000485987 COL18A1P39060 1754 aa11.13□□□□□ -0.63
LMO7-211ENST00000485987 COL3A1P02461 1466 aaPredicted RBP11.13□□□□□ -0.63
LMO7-211ENST00000485987 CCNYL3P0C7X3 344 aa11.13□□□□□ -0.63
LMO7-211ENST00000485987 AEBP1Q8IUX7 1158 aa11.13□□□□□ -0.63
LMO7-211ENST00000485987 GAS2L2Q8NHY3 880 aa11.13□□□□□ -0.63
LMO7-211ENST00000485987 ARXQ96QS3 562 aa11.13□□□□□ -0.63
LMO7-211ENST00000485987 EVA1BQ9NVM1 165 aa11.13□□□□□ -0.63
LMO7-211ENST00000485987 PLCH1Q4KWH8 1693 aa11.12□□□□□ -0.63
LMO7-211ENST00000485987 HSP90AB1P08238 724 aaKnown RBP11.12□□□□□ -0.63
LMO7-211ENST00000485987 WASHC4Q2M389 1173 aa11.12□□□□□ -0.63
LMO7-211ENST00000485987 SEPT12Q8IYM1 358 aa11.12□□□□□ -0.63
LMO7-211ENST00000485987 DDX54Q8TDD1 881 aaKnown RBP11.12□□□□□ -0.63
LMO7-211ENST00000485987 RTF1Q92541 710 aaKnown RBP11.12□□□□□ -0.63
LMO7-211ENST00000485987 SLC6A16Q9GZN6 736 aa11.12□□□□□ -0.63
LMO7-211ENST00000485987 KDRP35968 1356 aa11.12□□□□□ -0.63
LMO7-211ENST00000485987 PLEKHG2Q9H7P9 1386 aa11.12□□□□□ -0.63
LMO7-211ENST00000485987 POTEAQ6S8J7 498 aa11.11□□□□□ -0.63
LMO7-211ENST00000485987 CCDC146Q8IYE0 955 aa11.11□□□□□ -0.63
LMO7-211ENST00000485987 IFNL2Q8IZJ0 200 aa11.11□□□□□ -0.63
LMO7-211ENST00000485987 NGEFQ8N5V2 710 aa11.11□□□□□ -0.63
LMO7-211ENST00000485987 RGS17Q9UGC6 210 aaPredicted RBP11.11□□□□□ -0.63
LMO7-211ENST00000485987 FKBPLQ9UIM3 349 aa11.11□□□□□ -0.63
LMO7-211ENST00000485987 LMOD3Q0VAK6 560 aa11.1□□□□□ -0.63
LMO7-211ENST00000485987 KCNH2Q12809 1159 aa11.1□□□□□ -0.63
LMO7-211ENST00000485987 ZNF530Q6P9A1 599 aaPredicted RBP11.1□□□□□ -0.63
LMO7-211ENST00000485987 GLMNQ92990 594 aa11.1□□□□□ -0.63
LMO7-211ENST00000485987 FAM208AQ9UK61 1670 aaKnown RBP11.1□□□□□ -0.63
LMO7-211ENST00000485987 PCDH11XQ9BZA7 1347 aa11.09□□□□□ -0.63
LMO7-211ENST00000485987 PCDH11YQ9BZA8 1340 aa11.09□□□□□ -0.63
LMO7-211ENST00000485987 S1PR4O95977 384 aa11.09□□□□□ -0.63
LMO7-211ENST00000485987 NFE2L2Q16236 605 aa11.09□□□□□ -0.63
LMO7-211ENST00000485987 AKAP4Q5JQC9 854 aa11.09□□□□□ -0.63
LMO7-211ENST00000485987 CCDC24Q8N4L8 307 aa11.09□□□□□ -0.63
LMO7-211ENST00000485987 PNMA1Q8ND90 353 aa11.09□□□□□ -0.63
LMO7-211ENST00000485987 CALR3Q96L12 384 aaKnown RBP11.09□□□□□ -0.63
LMO7-211ENST00000485987 PLEKHF1Q96S99 279 aa11.09□□□□□ -0.63
LMO7-211ENST00000485987 GNAT3A8MTJ3 354 aa11.08□□□□□ -0.64
LMO7-211ENST00000485987 HTATSF1O43719 755 aaKnown RBP11.08□□□□□ -0.64
LMO7-211ENST00000485987 RGS20O76081 388 aa11.08□□□□□ -0.64
LMO7-211ENST00000485987 RIPK4P57078 832 aa11.08□□□□□ -0.64
LMO7-211ENST00000485987 MTHFSDQ2M296 383 aaKnown RBP11.08□□□□□ -0.64
LMO7-211ENST00000485987 HDGFL1Q5TGJ6 251 aa11.08□□□□□ -0.64
LMO7-211ENST00000485987 KRT27Q7Z3Y8 459 aa11.08□□□□□ -0.64
LMO7-211ENST00000485987 ADAMTS19Q8TE59 1207 aa11.08□□□□□ -0.64
LMO7-211ENST00000485987 PHACTR3Q96KR7 559 aa11.08□□□□□ -0.64
LMO7-211ENST00000485987 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.08□□□□□ -0.64
LMO7-211ENST00000485987 NCAPD2Q15021 1401 aa11.08□□□□□ -0.64
LMO7-211ENST00000485987 NRAPQ86VF7 1730 aa11.07□□□□□ -0.64
LMO7-211ENST00000485987 APAF1O14727 1248 aa11.07□□□□□ -0.64
LMO7-211ENST00000485987 CALD1Q05682 793 aaKnown RBP11.07□□□□□ -0.64
LMO7-211ENST00000485987 PTCRAQ6ISU1 281 aaPredicted RBP11.07□□□□□ -0.64
LMO7-211ENST00000485987 CCDC97Q96F63 343 aaPredicted RBP11.07□□□□□ -0.64
LMO7-211ENST00000485987 DCAF5Q96JK2 942 aa11.07□□□□□ -0.64
LMO7-211ENST00000485987 IRX2Q9BZI1 471 aaPredicted RBP11.07□□□□□ -0.64
LMO7-211ENST00000485987 SERPINA10Q9UK55 444 aa11.07□□□□□ -0.64
LMO7-211ENST00000485987 OVOS2A0A0G2JMS6 1433 aa11.07□□□□□ -0.64
LMO7-211ENST00000485987 RGPD5Q99666 1765 aa11.06□□□□□ -0.64
LMO7-211ENST00000485987 PHKG2P15735 406 aa11.06□□□□□ -0.64
LMO7-211ENST00000485987 TMPOP42166 694 aaKnown RBP11.06□□□□□ -0.64
LMO7-211ENST00000485987 IFFO2Q5TF58 517 aa11.06□□□□□ -0.64
LMO7-211ENST00000485987 DISP2A7MBM2 1401 aa11.06□□□□□ -0.64
LMO7-211ENST00000485987 MEGF6O75095 1541 aa11.05□□□□□ -0.64
LMO7-211ENST00000485987 FBXO45P0C2W1 286 aa11.05□□□□□ -0.64
LMO7-211ENST00000485987 TEFQ10587 303 aa11.05□□□□□ -0.64
LMO7-211ENST00000485987 FAM196AQ6ZSG2 479 aa11.05□□□□□ -0.64
LMO7-211ENST00000485987 HOMEZQ8IX15 550 aa11.05□□□□□ -0.64
LMO7-211ENST00000485987 RRP7AQ9Y3A4 280 aaKnown RBP11.05□□□□□ -0.64
LMO7-211ENST00000485987 MAP3K5Q99683 1374 aa11.04□□□□□ -0.64
LMO7-211ENST00000485987 CYP27B1O15528 508 aa11.04□□□□□ -0.64
LMO7-211ENST00000485987 CABP4P57796 275 aa11.04□□□□□ -0.64
LMO7-211ENST00000485987 HNRNPUQ00839 825 aaKnown RBP eCLIP11.04□□□□□ -0.64
LMO7-211ENST00000485987 KCNC4Q03721 635 aa11.04□□□□□ -0.64
LMO7-211ENST00000485987 MPRIPQ6WCQ1 1025 aa11.04□□□□□ -0.64
LMO7-211ENST00000485987 MARCH10Q8NA82 808 aaPredicted RBP11.04□□□□□ -0.64
LMO7-211ENST00000485987 UNC93B1Q9H1C4 597 aa11.04□□□□□ -0.64
LMO7-211ENST00000485987 RGPD1P0DJD0 1748 aa11.04□□□□□ -0.64
LMO7-211ENST00000485987 TNS2Q63HR2 1409 aa11.03□□□□□ -0.64
LMO7-211ENST00000485987 ERVV-2B6SEH9 535 aa11.03□□□□□ -0.64
LMO7-211ENST00000485987 NR1H3Q13133 447 aa11.03□□□□□ -0.64
LMO7-211ENST00000485987 SYTL4Q96C24 671 aaPredicted RBP11.03□□□□□ -0.64
LMO7-211ENST00000485987 ALG2Q9H553 416 aa11.03□□□□□ -0.64
LMO7-211ENST00000485987 FCF1Q9Y324 198 aaKnown RBP11.03□□□□□ -0.64
LMO7-211ENST00000485987 ZC3H4Q9UPT8 1303 aaKnown RBP11.03□□□□□ -0.64
LMO7-211ENST00000485987 GLI3P10071 1580 aa11.03□□□□□ -0.64
LMO7-211ENST00000485987 ZBBXA8MT70 800 aa11.02□□□□□ -0.65
LMO7-211ENST00000485987 PPEF1O14829 653 aaPredicted RBP11.02□□□□□ -0.65
LMO7-211ENST00000485987 ITGBL1O95965 494 aaPredicted RBP11.02□□□□□ -0.65
LMO7-211ENST00000485987 CCDC27Q2M243 656 aa11.02□□□□□ -0.65
LMO7-211ENST00000485987 TMOD3Q9NYL9 352 aa11.02□□□□□ -0.65
LMO7-211ENST00000485987 RNMTO43148 476 aaKnown RBP11.01□□□□□ -0.65
LMO7-211ENST00000485987 SF3B2Q13435 895 aaKnown RBP11.01□□□□□ -0.65
LMO7-211ENST00000485987 MCM10Q7L590 875 aa11.01□□□□□ -0.65
LMO7-211ENST00000485987 ARMC2Q8NEN0 867 aa11.01□□□□□ -0.65
LMO7-211ENST00000485987 PARP4Q9UKK3 1724 aaKnown RBP11.01□□□□□ -0.65
LMO7-211ENST00000485987 TAF7Q15545 349 aaPredicted RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms