RNA–Protein interactions for RNA: ENSMUST00000194959.5

Usp4-209, Transcript of Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Usp4, Length 3,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4-209ENSMUST00000194959 Nphp3Q7TNH6 1325 aa11.97□□□□□ -0.49
Usp4-209ENSMUST00000194959 Ctdnep1Q3TP92 244 aa11.96□□□□□ -0.49
Usp4-209ENSMUST00000194959 Rrp12Q6P5B0 1295 aaKnown RBP11.96□□□□□ -0.49
Usp4-209ENSMUST00000194959 Miga2Q8BK03 593 aa11.96□□□□□ -0.49
Usp4-209ENSMUST00000194959 Rps6kb1Q8BSK8 525 aa11.96□□□□□ -0.49
Usp4-209ENSMUST00000194959 Pdcl3Q8BVF2 240 aa11.96□□□□□ -0.49
Usp4-209ENSMUST00000194959 Nup88Q8CEC0 753 aaKnown RBP11.96□□□□□ -0.49
Usp4-209ENSMUST00000194959 Nid2O88322 1403 aa11.96□□□□□ -0.49
Usp4-209ENSMUST00000194959 Dnajc2P54103 621 aaKnown RBP11.96□□□□□ -0.49
Usp4-209ENSMUST00000194959 Bicdl1A0JNT9 577 aa11.96□□□□□ -0.5
Usp4-209ENSMUST00000194959 Lnx1O70263 728 aa11.96□□□□□ -0.5
Usp4-209ENSMUST00000194959 Gsdma2Q32M21 443 aa11.96□□□□□ -0.5
Usp4-209ENSMUST00000194959 Gm12185Q5NCB2 835 aa11.96□□□□□ -0.5
Usp4-209ENSMUST00000194959 Glipr1l2Q9CQ35 332 aa11.96□□□□□ -0.5
Usp4-209ENSMUST00000194959 Ptpn23Q6PB44 1692 aa11.96□□□□□ -0.5
Usp4-209ENSMUST00000194959 Cyp7a1Q64505 503 aa11.95□□□□□ -0.5
Usp4-209ENSMUST00000194959 AidaQ8C4Q6 305 aa11.95□□□□□ -0.5
Usp4-209ENSMUST00000194959 Krt25Q8VCW2 446 aa11.95□□□□□ -0.5
Usp4-209ENSMUST00000194959 Mctp1E9PV86 951 aa11.95□□□□□ -0.5
Usp4-209ENSMUST00000194959 FanccP50652 591 aa11.95□□□□□ -0.5
Usp4-209ENSMUST00000194959 Taok2Q6ZQ29 1240 aa11.95□□□□□ -0.5
Usp4-209ENSMUST00000194959 Erc1Q99MI1 1120 aa11.95□□□□□ -0.5
Usp4-209ENSMUST00000194959 Ccer1Q9CQL2 403 aa11.95□□□□□ -0.5
Usp4-209ENSMUST00000194959 Topaz1E5FYH1 1653 aa11.95□□□□□ -0.5
Usp4-209ENSMUST00000194959 Dhx16G3X8X0 1044 aaKnown RBP11.95□□□□□ -0.5
Usp4-209ENSMUST00000194959 Eya2O08575 532 aa11.95□□□□□ -0.5
Usp4-209ENSMUST00000194959 Stat1P42225 749 aa11.95□□□□□ -0.5
Usp4-209ENSMUST00000194959 Esyt1Q3U7R1 1092 aaKnown RBP11.95□□□□□ -0.5
Usp4-209ENSMUST00000194959 Zkscan8Q8BSL0 588 aa11.95□□□□□ -0.5
Usp4-209ENSMUST00000194959 Eno4Q8C042 619 aa11.95□□□□□ -0.5
Usp4-209ENSMUST00000194959 Nek11Q8C0Q4 628 aa11.95□□□□□ -0.5
Usp4-209ENSMUST00000194959 Bloc1s2Q9CWG9 143 aa11.95□□□□□ -0.5
Usp4-209ENSMUST00000194959 Ube2hP62257 183 aa11.94□□□□□ -0.5
Usp4-209ENSMUST00000194959 Brinp3Q499E0 766 aa11.94□□□□□ -0.5
Usp4-209ENSMUST00000194959 Ano1Q8BHY3 960 aa11.94□□□□□ -0.5
Usp4-209ENSMUST00000194959 Wdr24Q8CFJ9 790 aa11.94□□□□□ -0.5
Usp4-209ENSMUST00000194959 Cep57l1Q8VDS7 400 aa11.94□□□□□ -0.5
Usp4-209ENSMUST00000194959 Sil1Q9EPK6 465 aa11.94□□□□□ -0.5
Usp4-209ENSMUST00000194959 TnksQ6PFX9 1320 aa11.94□□□□□ -0.5
Usp4-209ENSMUST00000194959 Ccne2Q9Z238 404 aa11.94□□□□□ -0.5
Usp4-209ENSMUST00000194959 Cdhr2E9Q7P9 1308 aa11.94□□□□□ -0.5
Usp4-209ENSMUST00000194959 Tet3Q8BG87 1668 aa11.94□□□□□ -0.5
Usp4-209ENSMUST00000194959 Dctn1O08788 1281 aa11.93□□□□□ -0.5
Usp4-209ENSMUST00000194959 Abl1P00520 1123 aa11.93□□□□□ -0.5
Usp4-209ENSMUST00000194959 Wdr93Q402B2 695 aa11.93□□□□□ -0.5
Usp4-209ENSMUST00000194959 Atg9aQ68FE2 551 aa11.93□□□□□ -0.5
Usp4-209ENSMUST00000194959 Ubxn10Q8BG34 277 aa11.93□□□□□ -0.5
Usp4-209ENSMUST00000194959 Mrps25Q9D125 171 aaKnown RBP11.93□□□□□ -0.5
Usp4-209ENSMUST00000194959 Samd1D3YXK1 519 aa11.93□□□□□ -0.5
Usp4-209ENSMUST00000194959 Adcy5P84309 1262 aa11.93□□□□□ -0.5
Usp4-209ENSMUST00000194959 Larp6Q8BN59 492 aa11.93□□□□□ -0.5
Usp4-209ENSMUST00000194959 Psrc1Q9D0P7 329 aa11.93□□□□□ -0.5
Usp4-209ENSMUST00000194959 Popdc2Q9ES82 367 aa11.93□□□□□ -0.5
Usp4-209ENSMUST00000194959 Cyp2d10P24456 504 aa11.93□□□□□ -0.5
Usp4-209ENSMUST00000194959 Pram1Q6BCL1 675 aa11.93□□□□□ -0.5
Usp4-209ENSMUST00000194959 Nxf7Q80SZ6 620 aaKnown RBP11.93□□□□□ -0.5
Usp4-209ENSMUST00000194959 Ddrgk1Q80WW9 315 aa11.93□□□□□ -0.5
Usp4-209ENSMUST00000194959 Dmrt2Q8BG36 561 aa11.93□□□□□ -0.5
Usp4-209ENSMUST00000194959 Mb21d2Q8C525 428 aa11.93□□□□□ -0.5
Usp4-209ENSMUST00000194959 Nlrp3Q8R4B8 1033 aa11.93□□□□□ -0.5
Usp4-209ENSMUST00000194959 Mical1Q8VDP3 1048 aa11.93□□□□□ -0.5
Usp4-209ENSMUST00000194959 Zbtb1Q91VL9 713 aa11.93□□□□□ -0.5
Usp4-209ENSMUST00000194959 Trpm3Q5F4S9 1721 aa11.93□□□□□ -0.5
Usp4-209ENSMUST00000194959 Cfap73J3QPZ5 306 aa11.92□□□□□ -0.5
Usp4-209ENSMUST00000194959 Prdm1Q60636 856 aa11.92□□□□□ -0.5
Usp4-209ENSMUST00000194959 Myl10Q62082 202 aa11.92□□□□□ -0.5
Usp4-209ENSMUST00000194959 Gimap5Q8BWF2 308 aa11.92□□□□□ -0.5
Usp4-209ENSMUST00000194959 Cadps2Q8BYR5 1297 aa11.92□□□□□ -0.5
Usp4-209ENSMUST00000194959 Tmc2Q8R4P4 888 aa11.92□□□□□ -0.5
Usp4-209ENSMUST00000194959 Lrrc59Q922Q8 307 aaKnown RBP11.92□□□□□ -0.5
Usp4-209ENSMUST00000194959 Gpr182P43142 395 aa11.92□□□□□ -0.5
Usp4-209ENSMUST00000194959 NfkbibQ60778 359 aa11.92□□□□□ -0.5
Usp4-209ENSMUST00000194959 Ppp6r1Q7TSI3 856 aa11.92□□□□□ -0.5
Usp4-209ENSMUST00000194959 Dcaf5Q80T85 946 aa11.92□□□□□ -0.5
Usp4-209ENSMUST00000194959 TnmdQ9EP64 317 aa11.92□□□□□ -0.5
Usp4-209ENSMUST00000194959 Ush1cQ9ES64 910 aa11.92□□□□□ -0.5
Usp4-209ENSMUST00000194959 Scn7aB1AYL1 1681 aa11.92□□□□□ -0.5
Usp4-209ENSMUST00000194959 Pard3Q99NH2 1333 aa11.92□□□□□ -0.5
Usp4-209ENSMUST00000194959 Hspd1P63038 573 aaKnown RBP11.92□□□□□ -0.5
Usp4-209ENSMUST00000194959 Exoc5Q3TPX4 708 aa11.92□□□□□ -0.5
Usp4-209ENSMUST00000194959 Dlg5E9Q9R9 1921 aa11.91□□□□□ -0.5
Usp4-209ENSMUST00000194959 Kiaa0232Q80U59 1396 aaKnown RBP11.91□□□□□ -0.5
Usp4-209ENSMUST00000194959 Cops6O88545 324 aa11.91□□□□□ -0.5
Usp4-209ENSMUST00000194959 Washc4Q3UMB9 1173 aa11.91□□□□□ -0.5
Usp4-209ENSMUST00000194959 Bsdc1Q80Y55 427 aa11.91□□□□□ -0.5
Usp4-209ENSMUST00000194959 Zscan22Q8BGS5 496 aa11.91□□□□□ -0.5
Usp4-209ENSMUST00000194959 Sp8Q8BMJ8 486 aa11.91□□□□□ -0.5
Usp4-209ENSMUST00000194959 Kdm4aQ8BW72 1064 aa11.91□□□□□ -0.5
Usp4-209ENSMUST00000194959 ZgpatQ8VDM1 511 aa11.91□□□□□ -0.5
Usp4-209ENSMUST00000194959 Ssfa2Q922B9 1252 aa11.91□□□□□ -0.5
Usp4-209ENSMUST00000194959 Krt85Q9Z2T6 507 aa11.91□□□□□ -0.5
Usp4-209ENSMUST00000194959 Lmod3E9QA62 571 aa11.91□□□□□ -0.5
Usp4-209ENSMUST00000194959 Becn1O88597 448 aa11.91□□□□□ -0.5
Usp4-209ENSMUST00000194959 Slf2Q6P9P0 1278 aa11.91□□□□□ -0.5
Usp4-209ENSMUST00000194959 Gnl3lQ6PGG6 577 aaKnown RBP11.91□□□□□ -0.5
Usp4-209ENSMUST00000194959 Sept12Q9D451 317 aa11.91□□□□□ -0.5
Usp4-209ENSMUST00000194959 Hdac6Q9Z2V5 1149 aa11.91□□□□□ -0.5
Usp4-209ENSMUST00000194959 Pdia4P08003 638 aaKnown RBP11.91□□□□□ -0.5
Usp4-209ENSMUST00000194959 Ftl2P49945 183 aa11.91□□□□□ -0.5
Usp4-209ENSMUST00000194959 Atp2b3Q0VF55 1220 aa11.91□□□□□ -0.5
Retrieved 100 of 22,080 RNA–protein pairs in 68.7 ms