RNA–Protein interactions for RNA: YPR008W

HAA1, Transcript of Transcriptional activator involved in adaptation to weak acid stress, yeast

Gene HAA1, Length 2,085 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HAA1	YPR008W	YTA7	P40340	1379 aa		3.99	□□□□□ -1.77
HAA1	YPR008W	MSD1	P15179	658 aa	Known RBP	3.99	□□□□□ -1.77
HAA1	YPR008W	PRP9	P19736	530 aa	Known RBP	3.99	□□□□□ -1.77
HAA1	YPR008W	RKR1	Q04781	1562 aa		3.99	□□□□□ -1.77
HAA1	YPR008W	RPC82	P32349	654 aa		3.99	□□□□□ -1.77
HAA1	YPR008W	TRM2	P33753	639 aa		3.99	□□□□□ -1.77
HAA1	YPR008W	STE13	P33894	931 aa		3.99	□□□□□ -1.77
HAA1	YPR008W	BUL1	P48524	976 aa		3.99	□□□□□ -1.77
HAA1	YPR008W	NOP7	P53261	605 aa	Known RBP	3.99	□□□□□ -1.77
HAA1	YPR008W	LCD1	Q04377	747 aa		3.99	□□□□□ -1.77
HAA1	YPR008W	YCF1	P39109	1515 aa	Known RBP	3.99	□□□□□ -1.77
HAA1	YPR008W	YOR1	P53049	1477 aa		3.98	□□□□□ -1.77
HAA1	YPR008W	FBP1	P09201	348 aa		3.98	□□□□□ -1.77
HAA1	YPR008W	KAR4	P25583	335 aa		3.98	□□□□□ -1.77
HAA1	YPR008W	PSP2	P50109	593 aa	Known RBP	3.98	□□□□□ -1.77
HAA1	YPR008W	HDA1	P53973	706 aa		3.98	□□□□□ -1.77
HAA1	YPR008W	KIN4	Q01919	800 aa		3.98	□□□□□ -1.77
HAA1	YPR008W	PUS9	Q12069	462 aa		3.98	□□□□□ -1.77
HAA1	YPR008W	CHD1	P32657	1468 aa		3.98	□□□□□ -1.77
HAA1	YPR008W	ARE1	P25628	610 aa		3.98	□□□□□ -1.77
HAA1	YPR008W	DEF1	P35732	738 aa	Known RBP	3.98	□□□□□ -1.77
HAA1	YPR008W	PET10	P36139	283 aa		3.98	□□□□□ -1.77
HAA1	YPR008W	MSS4	P38994	779 aa		3.98	□□□□□ -1.77
HAA1	YPR008W	HUL5	P53119	910 aa		3.98	□□□□□ -1.77
HAA1	YPR008W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	3.98	□□□□□ -1.77	not detected
HAA1	YPR008W	BPT1	P14772	1559 aa		3.97	□□□□□ -1.77
HAA1	YPR008W	REC104	P33323	182 aa		3.97	□□□□□ -1.77
HAA1	YPR008W	BET3	P36149	193 aa		3.97	□□□□□ -1.77
HAA1	YPR008W	TIM54	P47045	478 aa		3.97	□□□□□ -1.77
HAA1	YPR008W	ERP6	P53198	216 aa		3.97	□□□□□ -1.77
HAA1	YPR008W	TAF8	Q03750	510 aa		3.97	□□□□□ -1.77
HAA1	YPR008W	SPO75	Q07798	868 aa		3.97	□□□□□ -1.77
HAA1	YPR008W	SMC4	Q12267	1418 aa		3.97	□□□□□ -1.77
HAA1	YPR008W	IOC3	P43596	787 aa		3.96	□□□□□ -1.77
HAA1	YPR008W	MSE1	P48525	536 aa		3.96	□□□□□ -1.77
HAA1	YPR008W	YGR125W	P53273	1036 aa		3.96	□□□□□ -1.77
HAA1	YPR008W	MMS22	Q06164	1454 aa		3.96	□□□□□ -1.78
HAA1	YPR008W	CIT1	P00890	479 aa		3.96	□□□□□ -1.78
HAA1	YPR008W	ATG19	P35193	415 aa		3.96	□□□□□ -1.78
HAA1	YPR008W	CEP3	P40969	608 aa		3.96	□□□□□ -1.78
HAA1	YPR008W	CCM1	P48237	864 aa	Predicted RBP	3.96	□□□□□ -1.78
HAA1	YPR008W	FLC1	Q08967	793 aa		3.96	□□□□□ -1.78
HAA1	YPR008W	ENV7	Q12003	364 aa		3.96	□□□□□ -1.78
HAA1	YPR008W	PFK1	P16861	987 aa	Known RBP	3.95	□□□□□ -1.78
HAA1	YPR008W	HSP60	P19882	572 aa	Known RBP	3.95	□□□□□ -1.78
HAA1	YPR008W	PMI40	P29952	429 aa	Known RBP	3.95	□□□□□ -1.78
HAA1	YPR008W	RTA1	P53047	317 aa		3.95	□□□□□ -1.78
HAA1	YPR008W	BDF2	Q07442	638 aa		3.95	□□□□□ -1.78
HAA1	YPR008W	MYO4	P32492	1471 aa		3.95	□□□□□ -1.78
HAA1	YPR008W	TY2B-LR1	P0C2J3	1770 aa		3.95	□□□□□ -1.78
HAA1	YPR008W	TY2B-F	P0CX63	1770 aa		3.95	□□□□□ -1.78
HAA1	YPR008W	TY2B-GR2	P0CX64	1770 aa		3.95	□□□□□ -1.78
HAA1	YPR008W	TY2B-C	P25384	1770 aa		3.95	□□□□□ -1.78
HAA1	YPR008W	TY2B-DR2	Q03494	1770 aa		3.95	□□□□□ -1.78
HAA1	YPR008W	TY1B-DR1	Q03855	1755 aa		3.95	□□□□□ -1.78
HAA1	YPR008W	TY2B-DR3	Q07791	1770 aa	Known RBP	3.95	□□□□□ -1.78
HAA1	YPR008W	TY2B-OR1	Q12113	1770 aa		3.95	□□□□□ -1.78
HAA1	YPR008W	TY2B-DR1	Q12472	1770 aa		3.95	□□□□□ -1.78
HAA1	YPR008W	TY2B-OR2	Q12501	1770 aa		3.95	□□□□□ -1.78
HAA1	YPR008W	YIL108W	P40483	696 aa	Known RBP	3.94	□□□□□ -1.78
HAA1	YPR008W	TPO2	P53283	614 aa		3.94	□□□□□ -1.78
HAA1	YPR008W	GSF2	Q04697	403 aa	Known RBP	3.94	□□□□□ -1.78
HAA1	YPR008W	TRM13	Q12383	476 aa		3.94	□□□□□ -1.78
HAA1	YPR008W	OSH2	Q12451	1283 aa		3.94	□□□□□ -1.78
HAA1	YPR008W	SED4	P25365	1065 aa		3.94	□□□□□ -1.78
HAA1	YPR008W	URA1	P28272	314 aa	Predicted RBP	3.94	□□□□□ -1.78
HAA1	YPR008W	SEC21	P32074	935 aa	Known RBP	3.94	□□□□□ -1.78
HAA1	YPR008W	CHS7	P38843	316 aa		3.94	□□□□□ -1.78
HAA1	YPR008W	RSP5	P39940	809 aa	Known RBP	3.94	□□□□□ -1.78
HAA1	YPR008W	GYP8	P43570	497 aa		3.94	□□□□□ -1.78
HAA1	YPR008W	YKR011C	Q02209	353 aa		3.94	□□□□□ -1.78
HAA1	YPR008W	CDC11	P32458	415 aa		3.93	□□□□□ -1.78
HAA1	YPR008W	AIM21	P40563	679 aa		3.93	□□□□□ -1.78
HAA1	YPR008W	UBP6	P43593	499 aa	Known RBP	3.93	□□□□□ -1.78
HAA1	YPR008W	ERG5	P54781	538 aa		3.93	□□□□□ -1.78
HAA1	YPR008W	TUB3	P09734	445 aa	Known RBP	3.93	□□□□□ -1.78
HAA1	YPR008W	RFA1	P22336	621 aa	Known RBP	3.93	□□□□□ -1.78
HAA1	YPR008W	CAD1	P24813	409 aa	Known RBP	3.93	□□□□□ -1.78
HAA1	YPR008W	HRR25	P29295	494 aa	Known RBP	3.93	□□□□□ -1.78
HAA1	YPR008W	TYE7	P33122	291 aa	Predicted RBP	3.93	□□□□□ -1.78
HAA1	YPR008W	SDP1	P40479	209 aa		3.93	□□□□□ -1.78
HAA1	YPR008W	ENB1	Q08299	606 aa		3.93	□□□□□ -1.78
HAA1	YPR008W	PNS1	Q12412	539 aa		3.93	□□□□□ -1.78
HAA1	YPR008W	CAN1	P04817	590 aa		3.92	□□□□□ -1.78
HAA1	YPR008W	RPP2A	P05319	106 aa	Known RBP	3.92	□□□□□ -1.78
HAA1	YPR008W	PRP4	P20053	465 aa	Known RBP	3.92	□□□□□ -1.78
HAA1	YPR008W	YCL002C	P25565	263 aa		3.92	□□□□□ -1.78
HAA1	YPR008W	TY1B-DR3	Q99231	1755 aa		3.91	□□□□□ -1.78
HAA1	YPR008W	CTF8	P38877	133 aa		3.91	□□□□□ -1.78
HAA1	YPR008W	TY4A-J	P47023	414 aa		3.91	□□□□□ -1.78
HAA1	YPR008W	NSE3	Q05541	303 aa		3.91	□□□□□ -1.78
HAA1	YPR008W	YLR040C	Q07988	224 aa		3.91	□□□□□ -1.78
HAA1	YPR008W	GUP2	Q08929	609 aa		3.91	□□□□□ -1.78
HAA1	YPR008W	HAL9	Q12180	1030 aa		3.91	□□□□□ -1.78
HAA1	YPR008W	YJL049W	P47048	450 aa		3.91	□□□□□ -1.78
HAA1	YPR008W	MRPS35	P53292	345 aa		3.91	□□□□□ -1.78
HAA1	YPR008W	LRS4	Q04087	347 aa	Known RBP	3.91	□□□□□ -1.78
HAA1	YPR008W	PPM2	Q08282	695 aa		3.91	□□□□□ -1.78
HAA1	YPR008W	TY2B-B	Q12491	1770 aa		3.91	□□□□□ -1.78
HAA1	YPR008W	SPP41	P38904	1435 aa		3.9	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 15 ms