RNA–Protein interactions for RNA: YPL139C

UME1, Transcript of Component of both the Rpd3S and Rpd3L histone deacetylase complexes, yeastyeast

Gene UME1, Length 1,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UME1YPL139C NUP82P40368 713 aa8.01□□□□□ -1.13
UME1YPL139C FYV10P40492 516 aa8.01□□□□□ -1.13
UME1YPL139C MCM6P53091 1017 aaKnown RBP8.01□□□□□ -1.13
UME1YPL139C MET13P53128 600 aa8.01□□□□□ -1.13
UME1YPL139C CAF130P53280 1122 aaPredicted RBP8.01□□□□□ -1.13
UME1YPL139C YNL034WP53963 612 aa8.01□□□□□ -1.13
UME1YPL139C YNL018CP53976 612 aa8.01□□□□□ -1.13
UME1YPL139C PCD1Q12524 340 aa8.01□□□□□ -1.13
UME1YPL139C MSD1P15179 658 aaKnown RBP8□□□□□ -1.13
UME1YPL139C CKA2P19454 339 aa8□□□□□ -1.13
UME1YPL139C ADK2P26364 225 aa8□□□□□ -1.13
UME1YPL139C PPS1P38148 807 aa8□□□□□ -1.13
UME1YPL139C RFS1P38234 210 aaKnown RBP8□□□□□ -1.13
UME1YPL139C VID24P38263 362 aa8□□□□□ -1.13
UME1YPL139C STB5P38699 743 aa8□□□□□ -1.13
UME1YPL139C FAF1P40546 346 aaPredicted RBP8□□□□□ -1.13
UME1YPL139C TOF1P53840 1238 aa8□□□□□ -1.13
UME1YPL139C YDR090CQ03193 310 aa8□□□□□ -1.13
UME1YPL139C YLR455WQ06188 304 aa8□□□□□ -1.13
UME1YPL139C PSR2Q07949 397 aa8□□□□□ -1.13
UME1YPL139C YOR022CQ12204 715 aa8□□□□□ -1.13
UME1YPL139C HIF1Q12373 385 aa8□□□□□ -1.13
UME1YPL139C RPL4AP10664 362 aaKnown RBP7.99□□□□□ -1.13
UME1YPL139C DBP5P20449 482 aaKnown RBP7.99□□□□□ -1.13
UME1YPL139C CSE2P33308 149 aa7.99□□□□□ -1.13
UME1YPL139C ATG19P35193 415 aa7.99□□□□□ -1.13
UME1YPL139C YAP1801P38856 637 aa7.99□□□□□ -1.13
UME1YPL139C RPL4BP49626 362 aaKnown RBP7.99□□□□□ -1.13
UME1YPL139C CUE3P53137 624 aaKnown RBP7.99□□□□□ -1.13
UME1YPL139C FOB1O13329 566 aa7.98□□□□□ -1.13
UME1YPL139C BIK1P11709 440 aa7.98□□□□□ -1.13
UME1YPL139C NAM7P30771 971 aaKnown RBP7.98□□□□□ -1.13
UME1YPL139C YSC83P32792 385 aa7.98□□□□□ -1.13
UME1YPL139C COT1P32798 439 aa7.98□□□□□ -1.13
UME1YPL139C RPT1P33299 467 aaKnown RBP7.98□□□□□ -1.13
UME1YPL139C GCS1P35197 352 aa7.98□□□□□ -1.13
UME1YPL139C YFL052WP43551 465 aa7.98□□□□□ -1.13
UME1YPL139C JJJ3P47138 172 aa7.98□□□□□ -1.13
UME1YPL139C ORC5P50874 479 aa7.98□□□□□ -1.13
UME1YPL139C RTC4P53850 401 aa7.98□□□□□ -1.13
UME1YPL139C YNL134CP53912 376 aaKnown RBP7.98□□□□□ -1.13
UME1YPL139C SKY1Q03656 742 aa7.98□□□□□ -1.13
UME1YPL139C YPL216WQ08964 1102 aa7.98□□□□□ -1.13
UME1YPL139C HFI1Q12060 488 aa7.98□□□□□ -1.13
UME1YPL139C DAL7P21826 554 aa7.97□□□□□ -1.13
UME1YPL139C DPH2P32461 534 aa7.97□□□□□ -1.13
UME1YPL139C PEX2P32800 271 aa7.97□□□□□ -1.13
UME1YPL139C MNN4P36044 1178 aa7.97□□□□□ -1.13
UME1YPL139C BIM1P40013 344 aa7.97□□□□□ -1.13
UME1YPL139C LAM5P43560 674 aa7.97□□□□□ -1.13
UME1YPL139C CUL3P53202 744 aa7.97□□□□□ -1.13
UME1YPL139C TRS130Q03660 1102 aa7.97□□□□□ -1.13
UME1YPL139C TRK2P28584 889 aa7.97□□□□□ -1.13
UME1YPL139C ESL1P40456 1118 aa7.97□□□□□ -1.13
UME1YPL139C NBP1P52919 319 aaPredicted RBP7.97□□□□□ -1.13
UME1YPL139C PEX14P53112 341 aa7.97□□□□□ -1.13
UME1YPL139C FAR11P53917 953 aa7.97□□□□□ -1.13
UME1YPL139C VTC3Q02725 835 aa7.97□□□□□ -1.13
UME1YPL139C PEX19Q07418 342 aa7.97□□□□□ -1.13
UME1YPL139C SPT2P06843 333 aaPredicted RBP7.96□□□□□ -1.14
UME1YPL139C TIF1P10081 395 aaKnown RBP7.96□□□□□ -1.14
UME1YPL139C CDC15P27636 974 aa7.96□□□□□ -1.14
UME1YPL139C HIR1P32479 840 aa7.96□□□□□ -1.14
UME1YPL139C YER186CP40101 306 aa7.96□□□□□ -1.14
UME1YPL139C HEH2Q03281 663 aa7.96□□□□□ -1.14
UME1YPL139C ECM7Q06200 448 aa7.96□□□□□ -1.14
UME1YPL139C CDC53Q12018 815 aaKnown RBP7.96□□□□□ -1.14
UME1YPL139C SCP160P06105 1222 aaKnown RBP RIP-Chip data7.95□□□□□ -1.14 RIP-Chip
UME1YPL139C SSD1P24276 1250 aaKnown RBP RIP-Chip data7.95□□□□□ -1.14not detected
UME1YPL139C RSA4P25382 515 aaKnown RBP7.95□□□□□ -1.14
UME1YPL139C RPC53P25441 422 aa7.95□□□□□ -1.14
UME1YPL139C BMH1P29311 267 aaKnown RBP7.95□□□□□ -1.14
UME1YPL139C BUD2P33314 1104 aa7.95□□□□□ -1.14
UME1YPL139C HEL1P36113 551 aa7.95□□□□□ -1.14
UME1YPL139C MRX3P38172 270 aa7.95□□□□□ -1.14
UME1YPL139C RFT1P38206 574 aaPredicted RBP7.95□□□□□ -1.14
UME1YPL139C APN2P38207 520 aa7.95□□□□□ -1.14
UME1YPL139C YIR016WP40572 265 aa7.95□□□□□ -1.14
UME1YPL139C HUL4P40985 892 aa7.95□□□□□ -1.14
UME1YPL139C STB4P50104 949 aa7.95□□□□□ -1.14
UME1YPL139C LSC2P53312 427 aa7.95□□□□□ -1.14
UME1YPL139C SNU56Q03782 492 aaKnown RBP7.95□□□□□ -1.14
UME1YPL139C SHS1Q07657 551 aa7.95□□□□□ -1.14
UME1YPL139C YPL277CQ08989 487 aa7.95□□□□□ -1.14
UME1YPL139C CIT2P08679 460 aa7.94□□□□□ -1.14
UME1YPL139C VTC2P43585 828 aa7.94□□□□□ -1.14
UME1YPL139C ASN1P49089 572 aaKnown RBP7.94□□□□□ -1.14
UME1YPL139C EEB1Q02891 456 aa7.94□□□□□ -1.14
UME1YPL139C YOL075CQ08234 1294 aa7.94□□□□□ -1.14
UME1YPL139C DAP1Q12091 152 aa7.94□□□□□ -1.14
UME1YPL139C IDI1P15496 288 aa7.93□□□□□ -1.14
UME1YPL139C PEX1P24004 1043 aa7.93□□□□□ -1.14
UME1YPL139C MRF1P30775 413 aaPredicted RBP7.93□□□□□ -1.14
UME1YPL139C CCL1P37366 393 aa7.93□□□□□ -1.14
UME1YPL139C APM2P38700 605 aa7.93□□□□□ -1.14
UME1YPL139C YHR202WP38887 602 aa7.93□□□□□ -1.14
UME1YPL139C UBP5P39944 805 aa7.93□□□□□ -1.14
UME1YPL139C BUD16P39988 312 aa7.93□□□□□ -1.14
UME1YPL139C LCB2P40970 561 aa7.93□□□□□ -1.14
UME1YPL139C CUR1Q06469 252 aa7.93□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms