RNA–Protein interactions for RNA: YPL104W

MSD1, Transcript of Mitochondrial aspartyl-tRNA synthetase, yeastyeast

Gene MSD1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSD1YPL104W SOL4P53315 255 aa3.98□□□□□ -1.77
MSD1YPL104W BNI4P53858 892 aa3.98□□□□□ -1.77
MSD1YPL104W CTR9P89105 1077 aa3.98□□□□□ -1.77
MSD1YPL104W MFM1Q02783 413 aa3.98□□□□□ -1.77
MSD1YPL104W ISU1Q03020 165 aa3.98□□□□□ -1.77
MSD1YPL104W AIM33Q04516 312 aa3.98□□□□□ -1.77
MSD1YPL104W TMA16Q08687 178 aa3.98□□□□□ -1.77
MSD1YPL104W NCR1Q12200 1170 aa3.98□□□□□ -1.77
MSD1YPL104W CSR2Q12734 1121 aa3.98□□□□□ -1.77
MSD1YPL104W YGR161W-CQ3E744 92 aa3.98□□□□□ -1.77
MSD1YPL104W MOD5P07884 428 aa3.98□□□□□ -1.77
MSD1YPL104W CKA2P19454 339 aa3.98□□□□□ -1.77
MSD1YPL104W ERG7P38604 731 aa3.98□□□□□ -1.77
MSD1YPL104W BCD1P38772 366 aa3.98□□□□□ -1.77
MSD1YPL104W PAN5P38787 379 aa3.98□□□□□ -1.77
MSD1YPL104W TAT2P38967 592 aa3.98□□□□□ -1.77
MSD1YPL104W NUP82P40368 713 aa3.98□□□□□ -1.77
MSD1YPL104W THI6P41835 540 aa3.98□□□□□ -1.77
MSD1YPL104W VTC2P43585 828 aa3.98□□□□□ -1.77
MSD1YPL104W VPS75P53853 264 aa3.98□□□□□ -1.77
MSD1YPL104W BUL2Q03758 920 aaKnown RBP3.98□□□□□ -1.77
MSD1YPL104W DAL4Q04895 635 aa3.98□□□□□ -1.77
MSD1YPL104W BSC2Q05611 235 aa3.98□□□□□ -1.77
MSD1YPL104W YLH47Q06493 454 aa3.98□□□□□ -1.77
MSD1YPL104W FOB1O13329 566 aa3.97□□□□□ -1.77
MSD1YPL104W KRS1P15180 591 aaKnown RBP3.97□□□□□ -1.77
MSD1YPL104W SMC1P32908 1225 aa3.97□□□□□ -1.77
MSD1YPL104W PHO88P38264 188 aaPredicted RBP3.97□□□□□ -1.77
MSD1YPL104W SUL1P38359 859 aa3.97□□□□□ -1.77
MSD1YPL104W NDT80P38830 627 aa3.97□□□□□ -1.77
MSD1YPL104W HXT8P40886 569 aa3.97□□□□□ -1.77
MSD1YPL104W EMW1P42842 904 aaKnown RBP3.97□□□□□ -1.77
MSD1YPL104W MRPS18P42847 217 aa3.97□□□□□ -1.77
MSD1YPL104W ROG3P43602 733 aa3.97□□□□□ -1.77
MSD1YPL104W STU2P46675 888 aa3.97□□□□□ -1.77
MSD1YPL104W TIM54P47045 478 aa3.97□□□□□ -1.77
MSD1YPL104W YJR142WP47173 342 aa3.97□□□□□ -1.77
MSD1YPL104W FMS1P50264 508 aa3.97□□□□□ -1.77
MSD1YPL104W LSC2P53312 427 aa3.97□□□□□ -1.77
MSD1YPL104W CBK1P53894 756 aa3.97□□□□□ -1.77
MSD1YPL104W YML037CQ03703 340 aa3.97□□□□□ -1.77
MSD1YPL104W ADY4Q05955 493 aa3.97□□□□□ -1.77
MSD1YPL104W SMC6Q12749 1114 aa3.97□□□□□ -1.77
MSD1YPL104W ILV1P00927 576 aaKnown RBP3.96□□□□□ -1.77
MSD1YPL104W CDC37P06101 506 aaKnown RBP3.96□□□□□ -1.77
MSD1YPL104W PHO13P19881 312 aa3.96□□□□□ -1.77
MSD1YPL104W VMA3P25515 160 aa3.96□□□□□ -1.77
MSD1YPL104W MRC1P25588 1096 aa3.96□□□□□ -1.77
MSD1YPL104W SPC110P32380 944 aa3.96□□□□□ -1.77
MSD1YPL104W MFT1P33441 392 aaKnown RBP3.96□□□□□ -1.77
MSD1YPL104W MKS1P34072 584 aa3.96□□□□□ -1.77
MSD1YPL104W SAP190P36123 1033 aa3.96□□□□□ -1.77
MSD1YPL104W PET10P36139 283 aa3.96□□□□□ -1.77
MSD1YPL104W ISW1P38144 1129 aa3.96□□□□□ -1.77
MSD1YPL104W SAP30P38429 201 aa3.96□□□□□ -1.77
MSD1YPL104W PTC2P39966 464 aaKnown RBP3.96□□□□□ -1.77
MSD1YPL104W YGR237CP50089 785 aa3.96□□□□□ -1.77
MSD1YPL104W RSC4Q02206 625 aa3.96□□□□□ -1.77
MSD1YPL104W SPP382Q06411 708 aaPredicted RBP3.96□□□□□ -1.77
MSD1YPL104W TDA5Q06417 326 aaKnown RBP3.96□□□□□ -1.77
MSD1YPL104W TLG2Q08144 397 aa3.96□□□□□ -1.77
MSD1YPL104W GIN4Q12263 1142 aa3.96□□□□□ -1.77
MSD1YPL104W YEL076C-AP0CX16 216 aa3.96□□□□□ -1.78
MSD1YPL104W YLR464WP0CX17 216 aa3.96□□□□□ -1.78
MSD1YPL104W PSO2P30620 661 aa3.96□□□□□ -1.78
MSD1YPL104W UGA4P32837 571 aa3.96□□□□□ -1.78
MSD1YPL104W YET1P35723 206 aa3.96□□□□□ -1.78
MSD1YPL104W YEL076CP39971 216 aa3.96□□□□□ -1.78
MSD1YPL104W PEA2P40091 420 aa3.96□□□□□ -1.78
MSD1YPL104W AIP1P46680 615 aaKnown RBP3.96□□□□□ -1.78
MSD1YPL104W PUS5Q06244 254 aa3.96□□□□□ -1.78
MSD1YPL104W WTM2Q12206 467 aa3.96□□□□□ -1.78
MSD1YPL104W RAD18P10862 487 aa3.95□□□□□ -1.78
MSD1YPL104W OM45P16547 393 aa3.95□□□□□ -1.78
MSD1YPL104W ISY1P21374 235 aaPredicted RBP3.95□□□□□ -1.78
MSD1YPL104W PRE9P23638 258 aaKnown RBP3.95□□□□□ -1.78
MSD1YPL104W MSH3P25336 1018 aa3.95□□□□□ -1.78
MSD1YPL104W TIM23P32897 222 aa3.95□□□□□ -1.78
MSD1YPL104W SWE1P32944 819 aa3.95□□□□□ -1.78
MSD1YPL104W OCT1P35999 772 aa3.95□□□□□ -1.78
MSD1YPL104W SIP3P38717 1229 aa3.95□□□□□ -1.78
MSD1YPL104W SPT8P38915 602 aa3.95□□□□□ -1.78
MSD1YPL104W RAD55P38953 406 aa3.95□□□□□ -1.78
MSD1YPL104W PGA2P53903 129 aa3.95□□□□□ -1.78
MSD1YPL104W NAN1Q02931 896 aaKnown RBP3.95□□□□□ -1.78
MSD1YPL104W EBS1Q03466 884 aaKnown RBP3.95□□□□□ -1.78
MSD1YPL104W YCG1Q06680 1035 aa3.95□□□□□ -1.78
MSD1YPL104W YAP7Q08182 245 aa3.95□□□□□ -1.78
MSD1YPL104W OPI10Q08202 246 aa3.95□□□□□ -1.78
MSD1YPL104W PHR1P05066 565 aaKnown RBP RIP-Chip data3.94□□□□□ -1.78not detected
MSD1YPL104W PHO8P11491 566 aa3.94□□□□□ -1.78
MSD1YPL104W CDC34P14682 295 aa3.94□□□□□ -1.78
MSD1YPL104W PER1P25625 357 aa3.94□□□□□ -1.78
MSD1YPL104W SEC65P29478 273 aa3.94□□□□□ -1.78
MSD1YPL104W SCD5P34758 872 aa3.94□□□□□ -1.78
MSD1YPL104W SPT23P35210 1082 aa3.94□□□□□ -1.78
MSD1YPL104W PPS1P38148 807 aa3.94□□□□□ -1.78
MSD1YPL104W CTM1P38818 585 aa3.94□□□□□ -1.78
MSD1YPL104W BRE2P43132 505 aa3.94□□□□□ -1.78
MSD1YPL104W FYV8P46949 817 aaKnown RBP3.94□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 115.6 ms