RNA–Protein interactions for RNA: YPL010W

RET3, Transcript of Zeta subunit of the coatomer complex (COPI), yeast

Gene RET3, Length 570 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RET3	YPL010W	PIK1	P39104	1066 aa		5	□□□□□ -1.61
RET3	YPL010W	MRPS18	P42847	217 aa		5	□□□□□ -1.61
RET3	YPL010W	RRP46	P53256	223 aa	Predicted RBP	5	□□□□□ -1.61
RET3	YPL010W	RPT4	P53549	437 aa	Known RBP	5	□□□□□ -1.61
RET3	YPL010W	SIW14	P53965	281 aa		5	□□□□□ -1.61
RET3	YPL010W	PSF3	Q12146	194 aa		5	□□□□□ -1.61
RET3	YPL010W	PTC5	Q12511	572 aa		5	□□□□□ -1.61
RET3	YPL010W	RPS13	P05756	151 aa	Known RBP	4.99	□□□□□ -1.61
RET3	YPL010W	SPS1	P08458	490 aa		4.99	□□□□□ -1.61
RET3	YPL010W	FBP1	P09201	348 aa		4.99	□□□□□ -1.61
RET3	YPL010W	SNF5	P18480	905 aa		4.99	□□□□□ -1.61
RET3	YPL010W	PRD1	P25375	712 aa		4.99	□□□□□ -1.61
RET3	YPL010W	MGM1	P32266	881 aa		4.99	□□□□□ -1.61
RET3	YPL010W	SLD2	P34252	453 aa		4.99	□□□□□ -1.61
RET3	YPL010W	MAL31	P38156	614 aa		4.99	□□□□□ -1.61
RET3	YPL010W	CCZ1	P38273	704 aa		4.99	□□□□□ -1.61
RET3	YPL010W	SPL2	P38839	148 aa		4.99	□□□□□ -1.61
RET3	YPL010W	NUG1	P40010	520 aa	Known RBP	4.99	□□□□□ -1.61
RET3	YPL010W	GYP7	P48365	746 aa		4.99	□□□□□ -1.61
RET3	YPL010W	HNT2	P49775	206 aa		4.99	□□□□□ -1.61
RET3	YPL010W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.99	□□□□□ -1.61	not detected
RET3	YPL010W	FCP1	Q03254	732 aa		4.99	□□□□□ -1.61
RET3	YPL010W	YLR225C	Q05948	407 aa	Known RBP	4.99	□□□□□ -1.61
RET3	YPL010W	RCL1	Q08096	367 aa	Predicted RBP	4.99	□□□□□ -1.61
RET3	YPL010W	PAH1	P32567	862 aa		4.98	□□□□□ -1.61
RET3	YPL010W	ALG3	P38179	458 aa		4.98	□□□□□ -1.61
RET3	YPL010W	SEC26	P41810	973 aa	Known RBP	4.98	□□□□□ -1.61
RET3	YPL010W	MTC3	P53077	123 aa		4.98	□□□□□ -1.61
RET3	YPL010W	YDR132C	Q03900	495 aa		4.98	□□□□□ -1.61
RET3	YPL010W	IOC4	Q04213	475 aa		4.98	□□□□□ -1.61
RET3	YPL010W	THI3	Q07471	609 aa		4.98	□□□□□ -1.61
RET3	YPL010W	RAD2	P07276	1031 aa		4.97	□□□□□ -1.61
RET3	YPL010W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.97	□□□□□ -1.61	not detected
RET3	YPL010W	RPS7A	P26786	190 aa	Known RBP	4.97	□□□□□ -1.61
RET3	YPL010W	PSF2	P40359	213 aa		4.97	□□□□□ -1.61
RET3	YPL010W	YJR008W	P47085	338 aa		4.97	□□□□□ -1.61
RET3	YPL010W	GNP1	P48813	663 aa		4.97	□□□□□ -1.61
RET3	YPL010W	SAC3	P46674	1301 aa		4.97	□□□□□ -1.61
RET3	YPL010W	CYC8	P14922	966 aa		4.96	□□□□□ -1.62
RET3	YPL010W	TOD6	P34219	525 aa		4.96	□□□□□ -1.62
RET3	YPL010W	RGD1	P38339	666 aa		4.96	□□□□□ -1.62
RET3	YPL010W	HXT13	P39924	564 aa		4.96	□□□□□ -1.62
RET3	YPL010W	HXT17	P53631	564 aa		4.96	□□□□□ -1.62
RET3	YPL010W	HXT15	P54854	567 aa		4.96	□□□□□ -1.62
RET3	YPL010W	GIN4	Q12263	1142 aa		4.96	□□□□□ -1.62
RET3	YPL010W	YLR358C	O13565	187 aa		4.95	□□□□□ -1.62
RET3	YPL010W	LCB1	P25045	558 aa	Known RBP	4.95	□□□□□ -1.62
RET3	YPL010W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.95	□□□□□ -1.62	not detected
RET3	YPL010W	MKK2	P32491	506 aa		4.95	□□□□□ -1.62
RET3	YPL010W	SEC8	P32855	1065 aa		4.95	□□□□□ -1.62
RET3	YPL010W	NUP133	P36161	1157 aa		4.95	□□□□□ -1.62
RET3	YPL010W	LAM1	P38851	1228 aa		4.95	□□□□□ -1.62
RET3	YPL010W	YVH1	Q02256	364 aa	Known RBP	4.95	□□□□□ -1.62
RET3	YPL010W	IRC4	Q03036	179 aa		4.95	□□□□□ -1.62
RET3	YPL010W	CLU1	Q03690	1277 aa	Known RBP	4.95	□□□□□ -1.62
RET3	YPL010W	WRS1	Q12109	432 aa	Known RBP	4.95	□□□□□ -1.62
RET3	YPL010W	SPO21	Q12411	609 aa		4.95	□□□□□ -1.62
RET3	YPL010W	SNU66	Q12420	587 aa	Predicted RBP	4.95	□□□□□ -1.62
RET3	YPL010W	ADR1	P07248	1323 aa		4.95	□□□□□ -1.62
RET3	YPL010W	SWI1	P09547	1314 aa		4.95	□□□□□ -1.62
RET3	YPL010W	FIG2	P25653	1609 aa		4.94	□□□□□ -1.62
RET3	YPL010W	ABZ1	P37254	787 aa	Predicted RBP	4.94	□□□□□ -1.62
RET3	YPL010W	MEF2	P39677	819 aa		4.94	□□□□□ -1.62
RET3	YPL010W	GPB2	P39717	880 aa		4.94	□□□□□ -1.62
RET3	YPL010W	NET1	P47035	1189 aa		4.94	□□□□□ -1.62
RET3	YPL010W	YJR107W	P47145	328 aa		4.94	□□□□□ -1.62
RET3	YPL010W	ROD1	Q02805	837 aa		4.94	□□□□□ -1.62
RET3	YPL010W	PMD1	P32634	1753 aa		4.93	□□□□□ -1.62
RET3	YPL010W	TAO3	P40468	2376 aa		4.93	□□□□□ -1.62
RET3	YPL010W	FLO11	P08640	1367 aa		4.93	□□□□□ -1.62
RET3	YPL010W	MRP7	P12687	371 aa		4.93	□□□□□ -1.62
RET3	YPL010W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.93	□□□□□ -1.62	not detected
RET3	YPL010W	DOM34	P33309	386 aa		4.93	□□□□□ -1.62
RET3	YPL010W	MGE1	P38523	228 aa		4.93	□□□□□ -1.62
RET3	YPL010W	ERG7	P38604	731 aa		4.93	□□□□□ -1.62
RET3	YPL010W	GCN5	Q03330	439 aa		4.93	□□□□□ -1.62
RET3	YPL010W	GSF2	Q04697	403 aa	Known RBP	4.93	□□□□□ -1.62
RET3	YPL010W	THI22	Q06490	572 aa		4.93	□□□□□ -1.62
RET3	YPL010W	YDR306C	Q06640	478 aa		4.93	□□□□□ -1.62
RET3	YPL010W	NOP8	Q08287	484 aa	Predicted RBP	4.93	□□□□□ -1.62
RET3	YPL010W	RSB1	Q08417	382 aa		4.93	□□□□□ -1.62
RET3	YPL010W	TY3A-G	Q12173	290 aa		4.93	□□□□□ -1.62
RET3	YPL010W	TY3A-I	Q99219	290 aa		4.93	□□□□□ -1.62
RET3	YPL010W	DED1	P06634	604 aa	Known RBP	4.92	□□□□□ -1.62
RET3	YPL010W	RAD53	P22216	821 aa		4.92	□□□□□ -1.62
RET3	YPL010W	YFH7	P43591	353 aa		4.92	□□□□□ -1.62
RET3	YPL010W	SRT1	Q03175	343 aa		4.92	□□□□□ -1.62
RET3	YPL010W	RTT109	Q07794	436 aa		4.92	□□□□□ -1.62
RET3	YPL010W	PPM2	Q08282	695 aa		4.92	□□□□□ -1.62
RET3	YPL010W	YPR117W	Q06116	2489 aa		4.91	□□□□□ -1.62
RET3	YPL010W	UTP10	P42945	1769 aa	Known RBP	4.91	□□□□□ -1.62
RET3	YPL010W	SYP1	P25623	870 aa	Known RBP	4.91	□□□□□ -1.62
RET3	YPL010W	OCT1	P35999	772 aa		4.91	□□□□□ -1.62
RET3	YPL010W	MCD4	P36051	919 aa		4.91	□□□□□ -1.62
RET3	YPL010W	RPS26A	P39938	119 aa	Known RBP	4.91	□□□□□ -1.62
RET3	YPL010W	RPS26B	P39939	119 aa	Known RBP	4.91	□□□□□ -1.62
RET3	YPL010W	VAB2	P40003	282 aa		4.91	□□□□□ -1.62
RET3	YPL010W	YFL040W	P43562	540 aa		4.91	□□□□□ -1.62
RET3	YPL010W	CNN1	P43618	361 aa		4.91	□□□□□ -1.62
RET3	YPL010W	DUS4	Q06063	367 aa		4.91	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 35.6 ms