RNA–Protein interactions for RNA: YKL006C-A

SFT1, Transcript of Intra-Golgi v-SNARE, yeastyeast

Gene SFT1, Length 294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFT1YKL006C-A YDL124WQ07551 312 aaKnown RBP4.74□□□□□ -1.65
SFT1YKL006C-A MSD1P15179 658 aaKnown RBP4.73□□□□□ -1.65
SFT1YKL006C-A KAR4P25583 335 aa4.73□□□□□ -1.65
SFT1YKL006C-A TYE7P33122 291 aaPredicted RBP4.73□□□□□ -1.65
SFT1YKL006C-A DEF1P35732 738 aaKnown RBP4.73□□□□□ -1.65
SFT1YKL006C-A PET10P36139 283 aa4.73□□□□□ -1.65
SFT1YKL006C-A HUL5P53119 910 aa4.73□□□□□ -1.65
SFT1YKL006C-A ENB1Q08299 606 aa4.73□□□□□ -1.65
SFT1YKL006C-A GUP2Q08929 609 aa4.73□□□□□ -1.65
SFT1YKL006C-A FLC1Q08967 793 aa4.73□□□□□ -1.65
SFT1YKL006C-A HRR25P29295 494 aaKnown RBP4.72□□□□□ -1.65
SFT1YKL006C-A NIT3P49954 291 aa4.72□□□□□ -1.65
SFT1YKL006C-A PUS2P53167 370 aa4.72□□□□□ -1.65
SFT1YKL006C-A NPL3Q01560 414 aaKnown RBP RIP-Chip data4.72□□□□□ -1.65 RIP-Chip
SFT1YKL006C-A YKR011CQ02209 353 aa4.72□□□□□ -1.65
SFT1YKL006C-A BUL2Q03758 920 aaKnown RBP4.72□□□□□ -1.65
SFT1YKL006C-A TOM70P07213 617 aaKnown RBP4.71□□□□□ -1.66
SFT1YKL006C-A TOP3P13099 656 aa4.71□□□□□ -1.66
SFT1YKL006C-A URA1P28272 314 aaPredicted RBP4.71□□□□□ -1.66
SFT1YKL006C-A MSS4P38994 779 aa4.71□□□□□ -1.66
SFT1YKL006C-A NNF1P47149 201 aa4.71□□□□□ -1.66
SFT1YKL006C-A MPH2P0CD99 609 aa4.7□□□□□ -1.66
SFT1YKL006C-A UBP6P43593 499 aaKnown RBP4.7□□□□□ -1.66
SFT1YKL006C-A JSN1P47135 1091 aaKnown RBP RIP-Chip data4.7□□□□□ -1.66not detected
SFT1YKL006C-A HDA1P53973 706 aa4.7□□□□□ -1.66
SFT1YKL006C-A PEX19Q07418 342 aa4.7□□□□□ -1.66
SFT1YKL006C-A CDC53Q12018 815 aaKnown RBP4.7□□□□□ -1.66
SFT1YKL006C-A CYS3P31373 394 aaKnown RBP4.69□□□□□ -1.66
SFT1YKL006C-A STE14P32584 239 aa4.69□□□□□ -1.66
SFT1YKL006C-A RSP5P39940 809 aaKnown RBP4.69□□□□□ -1.66
SFT1YKL006C-A SDP1P40479 209 aa4.69□□□□□ -1.66
SFT1YKL006C-A KIN4Q01919 800 aa4.69□□□□□ -1.66
SFT1YKL006C-A SWM1Q12379 170 aa4.69□□□□□ -1.66
SFT1YKL006C-A GGA2P38817 585 aaKnown RBP4.68□□□□□ -1.66
SFT1YKL006C-A NOG2P53742 486 aaKnown RBP4.68□□□□□ -1.66
SFT1YKL006C-A TAF8Q03750 510 aa4.68□□□□□ -1.66
SFT1YKL006C-A ENV7Q12003 364 aa4.68□□□□□ -1.66
SFT1YKL006C-A YOR131CQ12486 218 aa4.68□□□□□ -1.66
SFT1YKL006C-A FBP1P09201 348 aa4.67□□□□□ -1.66
SFT1YKL006C-A STI1P15705 589 aaKnown RBP RIP-Chip data4.67□□□□□ -1.66not detected
SFT1YKL006C-A DAL7P21826 554 aa4.67□□□□□ -1.66
SFT1YKL006C-A EFT1P32324 842 aaKnown RBP4.67□□□□□ -1.66
SFT1YKL006C-A SAP190P36123 1033 aa4.67□□□□□ -1.66
SFT1YKL006C-A SUL1P38359 859 aa4.67□□□□□ -1.66
SFT1YKL006C-A YHR020WP38708 688 aaKnown RBP4.67□□□□□ -1.66
SFT1YKL006C-A CTF4Q01454 927 aa4.67□□□□□ -1.66
SFT1YKL006C-A LAS17Q12446 633 aa4.67□□□□□ -1.66
SFT1YKL006C-A CAN1P04817 590 aa4.66□□□□□ -1.66
SFT1YKL006C-A PHR1P05066 565 aaKnown RBP RIP-Chip data4.66□□□□□ -1.66not detected
SFT1YKL006C-A SEC21P32074 935 aaKnown RBP4.66□□□□□ -1.66
SFT1YKL006C-A SRP40P32583 406 aaPredicted RBP4.66□□□□□ -1.66
SFT1YKL006C-A YHR078WP38799 552 aa4.66□□□□□ -1.66
SFT1YKL006C-A DAM1P53267 343 aa4.66□□□□□ -1.66
SFT1YKL006C-A YDR514CQ04408 483 aa4.66□□□□□ -1.66
SFT1YKL006C-A NSE3Q05541 303 aa4.66□□□□□ -1.66
SFT1YKL006C-A BDF2Q07442 638 aa4.66□□□□□ -1.66
SFT1YKL006C-A PRC1P00729 532 aa4.65□□□□□ -1.67
SFT1YKL006C-A TRP4P07285 380 aaPredicted RBP4.65□□□□□ -1.67
SFT1YKL006C-A GAL11P19659 1081 aa4.65□□□□□ -1.67
SFT1YKL006C-A ERG4P25340 473 aa4.65□□□□□ -1.67
SFT1YKL006C-A BET3P36149 193 aa4.65□□□□□ -1.67
SFT1YKL006C-A KTR4P38131 464 aa4.65□□□□□ -1.67
SFT1YKL006C-A CTF8P38877 133 aa4.65□□□□□ -1.67
SFT1YKL006C-A PZF1P39933 429 aa4.64□□□□□ -1.67
SFT1YKL006C-A ALG2P43636 503 aa4.64□□□□□ -1.67
SFT1YKL006C-A TAD1P53065 400 aa4.64□□□□□ -1.67
SFT1YKL006C-A SLI1P53304 468 aa4.64□□□□□ -1.67
SFT1YKL006C-A YGR283CP53336 341 aaPredicted RBP4.64□□□□□ -1.67
SFT1YKL006C-A HAL9Q12180 1030 aa4.64□□□□□ -1.67
SFT1YKL006C-A YOR022CQ12204 715 aa4.64□□□□□ -1.67
SFT1YKL006C-A YOL098CQ12496 1037 aa4.64□□□□□ -1.67
SFT1YKL006C-A YCL002CP25565 263 aa4.63□□□□□ -1.67
SFT1YKL006C-A EMC3P36039 253 aa4.63□□□□□ -1.67
SFT1YKL006C-A VHR1P40522 640 aa4.63□□□□□ -1.67
SFT1YKL006C-A GYP8P43570 497 aa4.63□□□□□ -1.67
SFT1YKL006C-A RTA1P53047 317 aa4.63□□□□□ -1.67
SFT1YKL006C-A DUS1P53759 423 aaKnown RBP4.63□□□□□ -1.67
SFT1YKL006C-A SLU7Q02775 382 aaKnown RBP4.63□□□□□ -1.67
SFT1YKL006C-A YLR040CQ07988 224 aa4.63□□□□□ -1.67
SFT1YKL006C-A TRM11Q12463 433 aa4.63□□□□□ -1.67
SFT1YKL006C-A NGG1P32494 702 aa4.62□□□□□ -1.67
SFT1YKL006C-A CTF13P35203 478 aa4.62□□□□□ -1.67
SFT1YKL006C-A RPP1P38786 293 aa4.62□□□□□ -1.67
SFT1YKL006C-A SHR5P41912 237 aa4.62□□□□□ -1.67
SFT1YKL006C-A PKH1Q03407 766 aa4.62□□□□□ -1.67
SFT1YKL006C-A LRS4Q04087 347 aaKnown RBP4.62□□□□□ -1.67
SFT1YKL006C-A REH1Q06709 432 aa4.62□□□□□ -1.67
SFT1YKL006C-A YOL073CQ08232 322 aa4.62□□□□□ -1.67
SFT1YKL006C-A YKL091CP33324 310 aaKnown RBP4.61□□□□□ -1.67
SFT1YKL006C-A CHS7P38843 316 aa4.61□□□□□ -1.67
SFT1YKL006C-A SAK1P38990 1142 aa4.61□□□□□ -1.67
SFT1YKL006C-A CHZ1P40019 153 aaPredicted RBP4.61□□□□□ -1.67
SFT1YKL006C-A SSY5P47002 699 aa4.61□□□□□ -1.67
SFT1YKL006C-A ZDS1P50111 915 aaKnown RBP4.61□□□□□ -1.67
SFT1YKL006C-A RNT1Q02555 471 aa4.61□□□□□ -1.67
SFT1YKL006C-A YMR206WQ03695 313 aa4.61□□□□□ -1.67
SFT1YKL006C-A RSC3Q06639 885 aa4.61□□□□□ -1.67
SFT1YKL006C-A MET3P08536 511 aa4.6□□□□□ -1.67
SFT1YKL006C-A TUB3P09734 445 aaKnown RBP4.6□□□□□ -1.67
SFT1YKL006C-A RAD53P22216 821 aa4.6□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 135.2 ms