RNA–Protein interactions for RNA: YJL143W

TIM17, Transcript of Essential component of the TIM23 complex, yeast

Gene TIM17, Length 477 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIM17	YJL143W	NPP2	P39997	493 aa		11.38	□□□□□ -0.59
TIM17	YJL143W	FIR1	P40020	876 aa		11.38	□□□□□ -0.59
TIM17	YJL143W	MGA2	P40578	1113 aa		11.38	□□□□□ -0.59
TIM17	YJL143W	LCB2	P40970	561 aa		11.38	□□□□□ -0.59
TIM17	YJL143W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	11.38	□□□□□ -0.59	not detected
TIM17	YJL143W	FYV8	P46949	817 aa	Known RBP	11.38	□□□□□ -0.59
TIM17	YJL143W	TPO2	P53283	614 aa		11.38	□□□□□ -0.59
TIM17	YJL143W	YDR090C	Q03193	310 aa		11.38	□□□□□ -0.59
TIM17	YJL143W	POT1	P27796	417 aa	Known RBP RIP-Chip data	11.37	□□□□□ -0.59	not detected
TIM17	YJL143W	MUD1	P32605	298 aa	Known RBP	11.37	□□□□□ -0.59
TIM17	YJL143W	EBP2	P36049	427 aa	Known RBP	11.37	□□□□□ -0.59
TIM17	YJL143W	FIG4	P42837	879 aa		11.37	□□□□□ -0.59
TIM17	YJL143W	MNP1	P53163	194 aa	Predicted RBP	11.37	□□□□□ -0.59
TIM17	YJL143W	TIM8	P57744	87 aa		11.37	□□□□□ -0.59
TIM17	YJL143W	MRX3	P38172	270 aa		11.36	□□□□□ -0.59
TIM17	YJL143W	MMS4	P38257	691 aa		11.36	□□□□□ -0.59
TIM17	YJL143W	UBP5	P39944	805 aa		11.36	□□□□□ -0.59
TIM17	YJL143W	SAD1	P43589	448 aa		11.36	□□□□□ -0.59
TIM17	YJL143W	ASN1	P49089	572 aa	Known RBP	11.36	□□□□□ -0.59
TIM17	YJL143W	ENV11	P53246	860 aa		11.36	□□□□□ -0.59
TIM17	YJL143W	TRS130	Q03660	1102 aa		11.36	□□□□□ -0.59
TIM17	YJL143W	SPO75	Q07798	868 aa		11.36	□□□□□ -0.59
TIM17	YJL143W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	11.35	□□□□□ -0.59	not detected
TIM17	YJL143W	SSB1	P11484	613 aa	Known RBP	11.35	□□□□□ -0.59
TIM17	YJL143W	ADE2	P21264	571 aa	Known RBP	11.35	□□□□□ -0.59
TIM17	YJL143W	MSH3	P25336	1018 aa		11.35	□□□□□ -0.59
TIM17	YJL143W	GRS1	P38088	690 aa	Known RBP	11.35	□□□□□ -0.59
TIM17	YJL143W	MIP6	P38760	659 aa	Known RBP	11.35	□□□□□ -0.59
TIM17	YJL143W	BRL1	P38770	471 aa		11.35	□□□□□ -0.59
TIM17	YJL143W	YAP1801	P38856	637 aa		11.35	□□□□□ -0.59
TIM17	YJL143W	SSB2	P40150	613 aa	Known RBP	11.35	□□□□□ -0.59
TIM17	YJL143W	ORC5	P50874	479 aa		11.35	□□□□□ -0.59
TIM17	YJL143W	YNL134C	P53912	376 aa	Known RBP	11.35	□□□□□ -0.59
TIM17	YJL143W	MUK1	Q02866	612 aa		11.35	□□□□□ -0.59
TIM17	YJL143W	UTP14	Q04500	899 aa	Known RBP	11.35	□□□□□ -0.59
TIM17	YJL143W	FAL1	Q12099	399 aa	Known RBP	11.35	□□□□□ -0.59
TIM17	YJL143W	SPO11	P23179	398 aa		11.34	□□□□□ -0.59
TIM17	YJL143W	RPC25	P35718	212 aa		11.34	□□□□□ -0.59
TIM17	YJL143W	YKL023W	P36103	277 aa	Known RBP	11.34	□□□□□ -0.59
TIM17	YJL143W	DRE2	P36152	348 aa		11.34	□□□□□ -0.59
TIM17	YJL143W	TVP23	P38962	199 aa		11.34	□□□□□ -0.59
TIM17	YJL143W	INP51	P40559	946 aa	Known RBP	11.34	□□□□□ -0.59
TIM17	YJL143W	LAM5	P43560	674 aa		11.34	□□□□□ -0.59
TIM17	YJL143W	ISM1	P48526	1002 aa		11.34	□□□□□ -0.59
TIM17	YJL143W	HSH155	P49955	971 aa	Known RBP	11.34	□□□□□ -0.59
TIM17	YJL143W	VPS75	P53853	264 aa		11.34	□□□□□ -0.59
TIM17	YJL143W	PLP2	Q12017	286 aa		11.34	□□□□□ -0.59
TIM17	YJL143W	PCD1	Q12524	340 aa		11.34	□□□□□ -0.59
TIM17	YJL143W	NAT1	P12945	854 aa	Known RBP	11.33	□□□□□ -0.6
TIM17	YJL143W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	11.33	□□□□□ -0.6	not detected
TIM17	YJL143W	LEO1	P38439	464 aa		11.33	□□□□□ -0.6
TIM17	YJL143W	SPO74	P45819	413 aa		11.33	□□□□□ -0.6
TIM17	YJL143W	ALT2	P52892	507 aa		11.33	□□□□□ -0.6
TIM17	YJL143W	DOT1	Q04089	582 aa	Known RBP	11.33	□□□□□ -0.6
TIM17	YJL143W	TAO3	P40468	2376 aa		11.33	□□□□□ -0.6
TIM17	YJL143W	GLN3	P18494	730 aa		11.32	□□□□□ -0.6
TIM17	YJL143W	PHO13	P19881	312 aa		11.32	□□□□□ -0.6
TIM17	YJL143W	TRM2	P33753	639 aa		11.32	□□□□□ -0.6
TIM17	YJL143W	MAC1	P35192	417 aa		11.32	□□□□□ -0.6
TIM17	YJL143W	POA1	P38218	177 aa		11.32	□□□□□ -0.6
TIM17	YJL143W	FTR1	P40088	404 aa		11.32	□□□□□ -0.6
TIM17	YJL143W	GCV2	P49095	1034 aa		11.32	□□□□□ -0.6
TIM17	YJL143W	FOL2	P51601	243 aa	Known RBP	11.32	□□□□□ -0.6
TIM17	YJL143W	SHS1	Q07657	551 aa		11.32	□□□□□ -0.6
TIM17	YJL143W	RPS6A	P0CX37	236 aa	Known RBP	11.31	□□□□□ -0.6
TIM17	YJL143W	RPS6B	P0CX38	236 aa	Predicted RBP	11.31	□□□□□ -0.6
TIM17	YJL143W	TIF1	P10081	395 aa	Known RBP	11.31	□□□□□ -0.6
TIM17	YJL143W	SEC65	P29478	273 aa		11.31	□□□□□ -0.6
TIM17	YJL143W	RPT1	P33299	467 aa	Known RBP	11.31	□□□□□ -0.6
TIM17	YJL143W	SMC3	P47037	1230 aa		11.31	□□□□□ -0.6
TIM17	YJL143W	YGR035C	P53222	116 aa		11.31	□□□□□ -0.6
TIM17	YJL143W	YLR297W	Q05899	129 aa		11.31	□□□□□ -0.6
TIM17	YJL143W	YGR130C	P53278	816 aa		11.3	□□□□□ -0.6
TIM17	YJL143W	YNL115C	P53925	644 aa		11.3	□□□□□ -0.6
TIM17	YJL143W	RPA49	Q01080	415 aa	Predicted RBP	11.3	□□□□□ -0.6
TIM17	YJL143W	SKY1	Q03656	742 aa		11.3	□□□□□ -0.6
TIM17	YJL143W	YLR287C	Q05881	355 aa		11.3	□□□□□ -0.6
TIM17	YJL143W	SGT2	Q12118	346 aa	Known RBP	11.3	□□□□□ -0.6
TIM17	YJL143W	ZPS1	Q12512	249 aa		11.3	□□□□□ -0.6
TIM17	YJL143W	UBR2	Q07963	1872 aa		11.29	□□□□□ -0.6
TIM17	YJL143W	SWI3	P32591	825 aa		11.29	□□□□□ -0.6
TIM17	YJL143W	SHM1	P37292	490 aa	Predicted RBP	11.29	□□□□□ -0.6
TIM17	YJL143W	SDS3	P40505	327 aa		11.29	□□□□□ -0.6
TIM17	YJL143W	CLA4	P48562	842 aa		11.29	□□□□□ -0.6
TIM17	YJL143W	CWC21	Q03375	135 aa	Known RBP	11.29	□□□□□ -0.6
TIM17	YJL143W	CSR1	Q06705	408 aa	Known RBP	11.29	□□□□□ -0.6
TIM17	YJL143W	CWC2	Q12046	339 aa	Predicted RBP	11.29	□□□□□ -0.6
TIM17	YJL143W	LAA1	P39526	2014 aa		11.29	□□□□□ -0.6
TIM17	YJL143W	COX4	P04037	155 aa		11.28	□□□□□ -0.6
TIM17	YJL143W	TOM70	P07213	617 aa	Known RBP	11.28	□□□□□ -0.6
TIM17	YJL143W	SPC110	P32380	944 aa		11.28	□□□□□ -0.6
TIM17	YJL143W	UBX7	P38349	436 aa		11.28	□□□□□ -0.6
TIM17	YJL143W	YHL026C	P38740	315 aa		11.28	□□□□□ -0.6
TIM17	YJL143W	VFA1	P40080	203 aa		11.28	□□□□□ -0.6
TIM17	YJL143W	ESL1	P40456	1118 aa		11.28	□□□□□ -0.6
TIM17	YJL143W	DAS1	P47005	663 aa		11.28	□□□□□ -0.6
TIM17	YJL143W	HFM1	P51979	1187 aa		11.28	□□□□□ -0.6
TIM17	YJL143W	ALG11	P53954	548 aa	Known RBP	11.28	□□□□□ -0.6
TIM17	YJL143W	YPR078C	Q06813	372 aa		11.28	□□□□□ -0.6
TIM17	YJL143W	PUS1	Q12211	544 aa	Known RBP	11.28	□□□□□ -0.6

Retrieved 100 of 5,963 RNA–protein pairs in 23.8 ms