RNA–Protein interactions for RNA: YJL061W

NUP82, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeast

Gene NUP82, Length 2,142 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP82	YJL061W	UGO1	Q03327	502 aa		3.19	□□□□□ -1.9
NUP82	YJL061W	YDR514C	Q04408	483 aa		3.19	□□□□□ -1.9
NUP82	YJL061W	DUS4	Q06063	367 aa		3.19	□□□□□ -1.9
NUP82	YJL061W	REH1	Q06709	432 aa		3.19	□□□□□ -1.9
NUP82	YJL061W	ADY3	Q07732	790 aa		3.19	□□□□□ -1.9
NUP82	YJL061W	YPL277C	Q08989	487 aa		3.19	□□□□□ -1.9
NUP82	YJL061W	PRP6	P19735	899 aa	Predicted RBP	3.18	□□□□□ -1.9
NUP82	YJL061W	TYE7	P33122	291 aa	Predicted RBP	3.18	□□□□□ -1.9
NUP82	YJL061W	SPC29	P33419	253 aa		3.18	□□□□□ -1.9
NUP82	YJL061W	MET12	P46151	657 aa		3.18	□□□□□ -1.9
NUP82	YJL061W	VPS62	P53285	467 aa		3.18	□□□□□ -1.9
NUP82	YJL061W	ATP25	Q03153	612 aa		3.18	□□□□□ -1.9
NUP82	YJL061W	ACK1	Q07622	623 aa	Predicted RBP	3.18	□□□□□ -1.9
NUP82	YJL061W	HIS5	P07172	385 aa		3.17	□□□□□ -1.9
NUP82	YJL061W	RNQ1	P25367	405 aa		3.17	□□□□□ -1.9
NUP82	YJL061W	CEP3	P40969	608 aa		3.17	□□□□□ -1.9
NUP82	YJL061W	MAL11	P53048	616 aa		3.17	□□□□□ -1.9
NUP82	YJL061W	YKR011C	Q02209	353 aa		3.17	□□□□□ -1.9
NUP82	YJL061W	UTP14	Q04500	899 aa	Known RBP	3.17	□□□□□ -1.9
NUP82	YJL061W	NOP12	Q08208	459 aa	Known RBP	3.17	□□□□□ -1.9
NUP82	YJL061W	HMI1	Q12039	706 aa		3.17	□□□□□ -1.9
NUP82	YJL061W	MDM12	Q92328	271 aa		3.17	□□□□□ -1.9
NUP82	YJL061W	CDC6	P09119	513 aa		3.17	□□□□□ -1.9
NUP82	YJL061W	EMC1	P25574	760 aa		3.17	□□□□□ -1.9
NUP82	YJL061W	PEX6	P33760	1030 aa		3.17	□□□□□ -1.9
NUP82	YJL061W	FPR3	P38911	411 aa	Known RBP	3.17	□□□□□ -1.9
NUP82	YJL061W	DSS1	P39112	969 aa		3.17	□□□□□ -1.9
NUP82	YJL061W	GCV2	P49095	1034 aa		3.17	□□□□□ -1.9
NUP82	YJL061W	PUS2	P53167	370 aa		3.17	□□□□□ -1.9
NUP82	YJL061W	MET7	Q08645	548 aa		3.17	□□□□□ -1.9
NUP82	YJL061W	DAL7	P21826	554 aa		3.16	□□□□□ -1.9
NUP82	YJL061W	CDC20	P26309	610 aa		3.16	□□□□□ -1.9
NUP82	YJL061W	TOD6	P34219	525 aa		3.16	□□□□□ -1.9
NUP82	YJL061W	YIL108W	P40483	696 aa	Known RBP	3.16	□□□□□ -1.9
NUP82	YJL061W	URM1	P40554	99 aa	Predicted RBP	3.16	□□□□□ -1.9
NUP82	YJL061W	HDA1	P53973	706 aa		3.16	□□□□□ -1.9
NUP82	YJL061W	DOS2	P54858	310 aa		3.16	□□□□□ -1.9
NUP82	YJL061W	YAP6	Q03935	383 aa		3.16	□□□□□ -1.9
NUP82	YJL061W	NTG2	Q08214	380 aa		3.16	□□□□□ -1.9
NUP82	YJL061W	CYS3	P31373	394 aa	Known RBP	3.16	□□□□□ -1.9
NUP82	YJL061W	BRN1	P38170	754 aa		3.16	□□□□□ -1.9
NUP82	YJL061W	MNN1	P39106	762 aa		3.16	□□□□□ -1.9
NUP82	YJL061W	TAD1	P53065	400 aa		3.16	□□□□□ -1.9
NUP82	YJL061W	YLR358C	O13565	187 aa		3.15	□□□□□ -1.91
NUP82	YJL061W	SED4	P25365	1065 aa		3.15	□□□□□ -1.91
NUP82	YJL061W	RPD3	P32561	433 aa		3.15	□□□□□ -1.91
NUP82	YJL061W	STO1	P34160	861 aa	Known RBP	3.15	□□□□□ -1.91
NUP82	YJL061W	MTC2	P34246	357 aa		3.15	□□□□□ -1.91
NUP82	YJL061W	SAP190	P36123	1033 aa		3.15	□□□□□ -1.91
NUP82	YJL061W	IRC24	P40580	263 aa		3.15	□□□□□ -1.91
NUP82	YJL061W	CHA4	P43634	648 aa		3.15	□□□□□ -1.91
NUP82	YJL061W	RSC3	Q06639	885 aa		3.15	□□□□□ -1.91
NUP82	YJL061W	PRC1	P00729	532 aa		3.14	□□□□□ -1.91
NUP82	YJL061W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	3.14	□□□□□ -1.91	not detected
NUP82	YJL061W	VBA3	P25594	458 aa		3.14	□□□□□ -1.91
NUP82	YJL061W	ZDS1	P50111	915 aa	Known RBP	3.14	□□□□□ -1.91
NUP82	YJL061W	SSL1	Q04673	461 aa	Predicted RBP	3.14	□□□□□ -1.91
NUP82	YJL061W	YLR224W	Q05947	369 aa		3.14	□□□□□ -1.91
NUP82	YJL061W	WHI4	Q07655	649 aa	Known RBP	3.14	□□□□□ -1.91
NUP82	YJL061W	FBP1	P09201	348 aa		3.14	□□□□□ -1.91
NUP82	YJL061W	MEF1	P25039	761 aa		3.14	□□□□□ -1.91
NUP82	YJL061W	SFP1	P32432	683 aa		3.14	□□□□□ -1.91
NUP82	YJL061W	SET5	P38890	526 aa	Known RBP	3.14	□□□□□ -1.91
NUP82	YJL061W	UBP5	P39944	805 aa		3.14	□□□□□ -1.91
NUP82	YJL061W	SDP1	P40479	209 aa		3.14	□□□□□ -1.91
NUP82	YJL061W	SHR5	P41912	237 aa		3.14	□□□□□ -1.91
NUP82	YJL061W	ALY2	P47029	1046 aa		3.14	□□□□□ -1.91
NUP82	YJL061W	UPC2	Q12151	913 aa		3.14	□□□□□ -1.91
NUP82	YJL061W	NOP14	Q99207	810 aa	Known RBP	3.14	□□□□□ -1.91
NUP82	YJL061W	DIF1	O13577	133 aa		3.13	□□□□□ -1.91
NUP82	YJL061W	CDC9	P04819	755 aa		3.13	□□□□□ -1.91
NUP82	YJL061W	STE11	P23561	717 aa		3.13	□□□□□ -1.91
NUP82	YJL061W	PER1	P25625	357 aa		3.13	□□□□□ -1.91
NUP82	YJL061W	THI80	P35202	319 aa		3.13	□□□□□ -1.91
NUP82	YJL061W	CTF8	P38877	133 aa		3.13	□□□□□ -1.91
NUP82	YJL061W	PLB1	P39105	664 aa		3.13	□□□□□ -1.91
NUP82	YJL061W	RLP7	P40693	322 aa	Known RBP	3.13	□□□□□ -1.91
NUP82	YJL061W	NCS6	P53088	359 aa		3.13	□□□□□ -1.91
NUP82	YJL061W	DUS1	P53759	423 aa	Known RBP	3.13	□□□□□ -1.91
NUP82	YJL061W	LRS4	Q04087	347 aa	Known RBP	3.13	□□□□□ -1.91
NUP82	YJL061W	YCL002C	P25565	263 aa		3.13	□□□□□ -1.91
NUP82	YJL061W	SPC42	P36094	363 aa		3.13	□□□□□ -1.91
NUP82	YJL061W	RPN10	P38886	268 aa	Known RBP	3.13	□□□□□ -1.91
NUP82	YJL061W	CAF16	P43569	289 aa		3.13	□□□□□ -1.91
NUP82	YJL061W	TY4A-J	P47023	414 aa		3.13	□□□□□ -1.91
NUP82	YJL061W	TFB2	Q02939	513 aa		3.13	□□□□□ -1.91
NUP82	YJL061W	YOR022C	Q12204	715 aa		3.13	□□□□□ -1.91
NUP82	YJL061W	NPC2	Q12408	173 aa		3.13	□□□□□ -1.91
NUP82	YJL061W	YGR161W-C	Q3E744	92 aa		3.13	□□□□□ -1.91
NUP82	YJL061W	SRD1	P09007	221 aa		3.12	□□□□□ -1.91
NUP82	YJL061W	YEL1	P34225	687 aa		3.12	□□□□□ -1.91
NUP82	YJL061W	MCD4	P36051	919 aa		3.12	□□□□□ -1.91
NUP82	YJL061W	YHR078W	P38799	552 aa		3.12	□□□□□ -1.91
NUP82	YJL061W	SNP1	Q00916	300 aa	Predicted RBP	3.12	□□□□□ -1.91
NUP82	YJL061W	COG8	Q04632	607 aa		3.12	□□□□□ -1.91
NUP82	YJL061W	HAL9	Q12180	1030 aa		3.12	□□□□□ -1.91
NUP82	YJL061W	YBR182C-A	Q8TGU6	64 aa		3.12	□□□□□ -1.91
NUP82	YJL061W	STE14	P32584	239 aa		3.11	□□□□□ -1.91
NUP82	YJL061W	HXT16	P47185	567 aa		3.11	□□□□□ -1.91
NUP82	YJL061W	CLU1	Q03690	1277 aa	Known RBP	3.11	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 57.2 ms