RNA–Protein interactions for RNA: YHR120W

MSH1, Transcript of DNA-binding protein of the mitochondria, yeastyeast

Gene MSH1, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH1YHR120W SMC3P47037 1230 aa5.52□□□□□ -1.53
MSH1YHR120W MAL13P53338 473 aa5.52□□□□□ -1.53
MSH1YHR120W YNL146WP53906 100 aa5.52□□□□□ -1.53
MSH1YHR120W SKY1Q03656 742 aa5.52□□□□□ -1.53
MSH1YHR120W YDL057WQ07379 328 aa5.52□□□□□ -1.53
MSH1YHR120W DPH2P32461 534 aa5.52□□□□□ -1.53
MSH1YHR120W MFT1P33441 392 aaKnown RBP5.52□□□□□ -1.53
MSH1YHR120W BCH2P36122 765 aa5.52□□□□□ -1.53
MSH1YHR120W CCC2P38995 1004 aa5.52□□□□□ -1.53
MSH1YHR120W YGR130CP53278 816 aa5.52□□□□□ -1.53
MSH1YHR120W RPC53P25441 422 aa5.51□□□□□ -1.53
MSH1YHR120W PPS1P38148 807 aa5.51□□□□□ -1.53
MSH1YHR120W SLX1P38324 304 aa5.51□□□□□ -1.53
MSH1YHR120W UBX7P38349 436 aa5.51□□□□□ -1.53
MSH1YHR120W YAP1801P38856 637 aa5.51□□□□□ -1.53
MSH1YHR120W OPT1P40897 799 aa5.51□□□□□ -1.53
MSH1YHR120W VTC2P43585 828 aa5.51□□□□□ -1.53
MSH1YHR120W MNP1P53163 194 aaPredicted RBP5.51□□□□□ -1.53
MSH1YHR120W EMI2Q04409 500 aaKnown RBP5.51□□□□□ -1.53
MSH1YHR120W PSR2Q07949 397 aa5.51□□□□□ -1.53
MSH1YHR120W PCD1Q12524 340 aa5.51□□□□□ -1.53
MSH1YHR120W YSC83P32792 385 aa5.51□□□□□ -1.53
MSH1YHR120W BUD2P33314 1104 aa5.51□□□□□ -1.53
MSH1YHR120W TOF1P53840 1238 aa5.51□□□□□ -1.53
MSH1YHR120W YNL134CP53912 376 aaKnown RBP5.51□□□□□ -1.53
MSH1YHR120W SEC5P89102 971 aa5.51□□□□□ -1.53
MSH1YHR120W TIF1P10081 395 aaKnown RBP5.5□□□□□ -1.53
MSH1YHR120W MSD1P15179 658 aaKnown RBP5.5□□□□□ -1.53
MSH1YHR120W DPB3P27344 201 aa5.5□□□□□ -1.53
MSH1YHR120W HIR1P32479 840 aa5.5□□□□□ -1.53
MSH1YHR120W RRP1P35178 278 aaPredicted RBP5.5□□□□□ -1.53
MSH1YHR120W YHL026CP38740 315 aa5.5□□□□□ -1.53
MSH1YHR120W TAM41P53230 385 aa5.5□□□□□ -1.53
MSH1YHR120W ENV11P53246 860 aa5.5□□□□□ -1.53
MSH1YHR120W DOT1Q04089 582 aaKnown RBP5.5□□□□□ -1.53
MSH1YHR120W CUR1Q06469 252 aa5.5□□□□□ -1.53
MSH1YHR120W OSW2Q12202 724 aa5.5□□□□□ -1.53
MSH1YHR120W COX4P04037 155 aa5.5□□□□□ -1.53
MSH1YHR120W GLN3P18494 730 aa5.5□□□□□ -1.53
MSH1YHR120W MSH1P25846 959 aa5.5□□□□□ -1.53
MSH1YHR120W MVP1P40959 511 aaKnown RBP5.5□□□□□ -1.53
MSH1YHR120W CUL3P53202 744 aa5.5□□□□□ -1.53
MSH1YHR120W YLR455WQ06188 304 aa5.5□□□□□ -1.53
MSH1YHR120W ADE4P04046 510 aaKnown RBP5.49□□□□□ -1.53
MSH1YHR120W NAM7P30771 971 aaKnown RBP5.49□□□□□ -1.53
MSH1YHR120W YEL043WP32618 956 aa5.49□□□□□ -1.53
MSH1YHR120W ADE17P38009 592 aaKnown RBP5.49□□□□□ -1.53
MSH1YHR120W VID24P38263 362 aa5.49□□□□□ -1.53
MSH1YHR120W LAM5P43560 674 aa5.49□□□□□ -1.53
MSH1YHR120W MRS2Q01926 470 aa5.49□□□□□ -1.53
MSH1YHR120W YDR090CQ03193 310 aa5.49□□□□□ -1.53
MSH1YHR120W ECM7Q06200 448 aa5.49□□□□□ -1.53
MSH1YHR120W TMA16Q08687 178 aa5.49□□□□□ -1.53
MSH1YHR120W APL4Q12028 832 aa5.49□□□□□ -1.53
MSH1YHR120W PCK1P10963 549 aa5.49□□□□□ -1.53
MSH1YHR120W CDC15P27636 974 aa5.49□□□□□ -1.53
MSH1YHR120W VPS35P34110 944 aa5.49□□□□□ -1.53
MSH1YHR120W YEL1P34225 687 aa5.49□□□□□ -1.53
MSH1YHR120W BCD1P38772 366 aa5.49□□□□□ -1.53
MSH1YHR120W FMP10P40098 244 aa5.49□□□□□ -1.53
MSH1YHR120W ESL1P40456 1118 aa5.49□□□□□ -1.53
MSH1YHR120W MET13P53128 600 aa5.49□□□□□ -1.53
MSH1YHR120W VTC3Q02725 835 aa5.49□□□□□ -1.53
MSH1YHR120W YPL277CQ08989 487 aa5.49□□□□□ -1.53
MSH1YHR120W SEC23P15303 768 aaKnown RBP5.49□□□□□ -1.53
MSH1YHR120W SSD1P24276 1250 aaKnown RBP RIP-Chip data5.49□□□□□ -1.53not detected
MSH1YHR120W UBP13P38187 747 aa5.49□□□□□ -1.53
MSH1YHR120W PNG1Q02890 363 aa5.49□□□□□ -1.53
MSH1YHR120W GFD1Q04839 188 aaKnown RBP5.49□□□□□ -1.53
MSH1YHR120W MCM16Q12262 181 aa5.49□□□□□ -1.53
MSH1YHR120W ZPS1Q12512 249 aa5.49□□□□□ -1.53
MSH1YHR120W SPT2P06843 333 aaPredicted RBP5.48□□□□□ -1.53
MSH1YHR120W TOM70P07213 617 aaKnown RBP5.48□□□□□ -1.53
MSH1YHR120W RPT1P33299 467 aaKnown RBP5.48□□□□□ -1.53
MSH1YHR120W MRX3P38172 270 aa5.48□□□□□ -1.53
MSH1YHR120W INP52P50942 1183 aa5.48□□□□□ -1.53
MSH1YHR120W ALT2P52892 507 aa5.48□□□□□ -1.53
MSH1YHR120W NBP1P52919 319 aaPredicted RBP5.48□□□□□ -1.53
MSH1YHR120W TRS130Q03660 1102 aa5.48□□□□□ -1.53
MSH1YHR120W DAL7P21826 554 aa5.48□□□□□ -1.53
MSH1YHR120W URK1P27515 501 aa5.48□□□□□ -1.53
MSH1YHR120W SKG6P32900 734 aaPredicted RBP5.48□□□□□ -1.53
MSH1YHR120W BUD16P39988 312 aa5.48□□□□□ -1.53
MSH1YHR120W BIM1P40013 344 aa5.48□□□□□ -1.53
MSH1YHR120W HUL4P40985 892 aa5.48□□□□□ -1.53
MSH1YHR120W YFL034WP43564 1073 aa5.48□□□□□ -1.53
MSH1YHR120W ORC5P50874 479 aa5.48□□□□□ -1.53
MSH1YHR120W VPS38Q05919 439 aa5.48□□□□□ -1.53
MSH1YHR120W CDC53Q12018 815 aaKnown RBP5.48□□□□□ -1.53
MSH1YHR120W YOR022CQ12204 715 aa5.48□□□□□ -1.53
MSH1YHR120W YMR084WA2P2R3 262 aa5.47□□□□□ -1.53
MSH1YHR120W PRC1P00729 532 aa5.47□□□□□ -1.53
MSH1YHR120W PHO8P11491 566 aa5.47□□□□□ -1.53
MSH1YHR120W IDI1P15496 288 aa5.47□□□□□ -1.53
MSH1YHR120W SPO11P23179 398 aa5.47□□□□□ -1.53
MSH1YHR120W ADK2P26364 225 aa5.47□□□□□ -1.53
MSH1YHR120W CSE2P33308 149 aa5.47□□□□□ -1.53
MSH1YHR120W APN2P38207 520 aa5.47□□□□□ -1.53
MSH1YHR120W EFM2P38347 419 aa5.47□□□□□ -1.53
MSH1YHR120W HEH2Q03281 663 aa5.47□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms