RNA–Protein interactions for RNA: YGL173C

XRN1, Transcript of Evolutionarily-conserved 5'-3' exonuclease, yeastyeast

Gene XRN1, Length 4,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
XRN1YGL173C URB1P34241 1764 aaKnown RBP3.59□□□□□ -1.84
XRN1YGL173C MPH2P0CD99 609 aa3.58□□□□□ -1.84
XRN1YGL173C SYP1P25623 870 aaKnown RBP3.58□□□□□ -1.84
XRN1YGL173C YJU2P28320 278 aaPredicted RBP3.58□□□□□ -1.84
XRN1YGL173C ALG2P43636 503 aa3.58□□□□□ -1.84
XRN1YGL173C JJJ2P46997 583 aa3.58□□□□□ -1.84
XRN1YGL173C GYP7P48365 746 aa3.58□□□□□ -1.84
XRN1YGL173C CWC24P53769 259 aa3.58□□□□□ -1.84
XRN1YGL173C SIS1P25294 352 aaKnown RBP3.58□□□□□ -1.84
XRN1YGL173C MAL31P38156 614 aa3.58□□□□□ -1.84
XRN1YGL173C CAJ1P39101 391 aa3.58□□□□□ -1.84
XRN1YGL173C SLD3P53135 668 aa3.58□□□□□ -1.84
XRN1YGL173C GLO4Q12320 285 aa3.58□□□□□ -1.84
XRN1YGL173C MLP1Q02455 1875 aaKnown RBP3.58□□□□□ -1.84
XRN1YGL173C KCC4P25389 1037 aa3.58□□□□□ -1.84
XRN1YGL173C ADD66P36040 267 aa3.58□□□□□ -1.84
XRN1YGL173C PGM2P37012 569 aaKnown RBP3.58□□□□□ -1.84
XRN1YGL173C KTR7P40504 517 aa3.58□□□□□ -1.84
XRN1YGL173C BDP1P46678 594 aa3.58□□□□□ -1.84
XRN1YGL173C HLJ1P48353 224 aa3.58□□□□□ -1.84
XRN1YGL173C YDL129WQ07555 291 aa3.58□□□□□ -1.84
XRN1YGL173C SSP2Q08646 371 aa3.58□□□□□ -1.84
XRN1YGL173C ENT1Q12518 454 aa3.58□□□□□ -1.84
XRN1YGL173C BCK1Q01389 1478 aa3.58□□□□□ -1.84
XRN1YGL173C ACE2P21192 770 aa3.58□□□□□ -1.84
XRN1YGL173C BIT2P38346 545 aa3.58□□□□□ -1.84
XRN1YGL173C SPC72P39723 622 aa3.58□□□□□ -1.84
XRN1YGL173C RVB2Q12464 471 aaKnown RBP3.58□□□□□ -1.84
XRN1YGL173C JIP3O13555 125 aa3.57□□□□□ -1.84
XRN1YGL173C ERR1P0CX10 437 aa3.57□□□□□ -1.84
XRN1YGL173C ERR2P0CX11 437 aa3.57□□□□□ -1.84
XRN1YGL173C OAF1P39720 1047 aaPredicted RBP3.57□□□□□ -1.84
XRN1YGL173C KAP123P40069 1113 aaKnown RBP3.57□□□□□ -1.84
XRN1YGL173C VID27P40157 782 aa3.57□□□□□ -1.84
XRN1YGL173C HSV2P50079 448 aaPredicted RBP3.57□□□□□ -1.84
XRN1YGL173C ENV11P53246 860 aa3.57□□□□□ -1.84
XRN1YGL173C FRK1Q03002 865 aaPredicted RBP3.57□□□□□ -1.84
XRN1YGL173C YOL087CQ99247 1116 aa3.57□□□□□ -1.84
XRN1YGL173C PHO81P17442 1178 aa3.57□□□□□ -1.84
XRN1YGL173C PUF4P25339 888 aaKnown RBP RIP-Chip data3.57□□□□□ -1.84not detected
XRN1YGL173C SPB1P25582 841 aaPredicted RBP3.57□□□□□ -1.84
XRN1YGL173C PER1P25625 357 aa3.57□□□□□ -1.84
XRN1YGL173C CMK1P27466 446 aaKnown RBP3.57□□□□□ -1.84
XRN1YGL173C CCR4P31384 837 aaKnown RBP3.57□□□□□ -1.84
XRN1YGL173C MDL2P33311 773 aa3.57□□□□□ -1.84
XRN1YGL173C ARP7Q12406 477 aa3.57□□□□□ -1.84
XRN1YGL173C ADR1P07248 1323 aa3.57□□□□□ -1.84
XRN1YGL173C UTP10P42945 1769 aaKnown RBP3.57□□□□□ -1.84
XRN1YGL173C HTS1P07263 546 aaKnown RBP3.57□□□□□ -1.84
XRN1YGL173C DAL5P15365 543 aa3.57□□□□□ -1.84
XRN1YGL173C YCL049CP25577 312 aa3.57□□□□□ -1.84
XRN1YGL173C AFR1P33304 620 aa3.57□□□□□ -1.84
XRN1YGL173C DOM34P33309 386 aa3.57□□□□□ -1.84
XRN1YGL173C SRP68P38687 599 aaKnown RBP3.57□□□□□ -1.84
XRN1YGL173C UPF3P48412 387 aaKnown RBP3.57□□□□□ -1.84
XRN1YGL173C TIF35Q04067 274 aaKnown RBP3.57□□□□□ -1.84
XRN1YGL173C RSC58Q07979 502 aa3.57□□□□□ -1.84
XRN1YGL173C RGP1P16664 663 aa3.56□□□□□ -1.84
XRN1YGL173C PRE10P21242 288 aaKnown RBP RIP-Chip data3.56□□□□□ -1.84not detected
XRN1YGL173C RAD16P31244 790 aa3.56□□□□□ -1.84
XRN1YGL173C ECM1P39715 212 aa3.56□□□□□ -1.84
XRN1YGL173C RAT1Q02792 1006 aaKnown RBP3.56□□□□□ -1.84
XRN1YGL173C TAF11Q04226 346 aa3.56□□□□□ -1.84
XRN1YGL173C SPO21Q12411 609 aa3.56□□□□□ -1.84
XRN1YGL173C PGA3Q12746 312 aaKnown RBP3.56□□□□□ -1.84
XRN1YGL173C RET1P22276 1149 aaKnown RBP3.56□□□□□ -1.84
XRN1YGL173C MCM3P24279 971 aaKnown RBP3.56□□□□□ -1.84
XRN1YGL173C VPS8P39702 1274 aa3.56□□□□□ -1.84
XRN1YGL173C TMA108P40462 946 aa3.56□□□□□ -1.84
XRN1YGL173C QDR2P40474 542 aa3.56□□□□□ -1.84
XRN1YGL173C MEC3Q02574 474 aa3.56□□□□□ -1.84
XRN1YGL173C PKH1Q03407 766 aa3.56□□□□□ -1.84
XRN1YGL173C NSE5Q03718 556 aa3.56□□□□□ -1.84
XRN1YGL173C YRF1-3P0CX14 1859 aa3.56□□□□□ -1.84
XRN1YGL173C YRF1-7P0CX15 1859 aa3.56□□□□□ -1.84
XRN1YGL173C YRF1-6P53819 1859 aa3.56□□□□□ -1.84
XRN1YGL173C FBP1P09201 348 aa3.56□□□□□ -1.84
XRN1YGL173C RPL19AP0CX82 189 aaKnown RBP3.56□□□□□ -1.84
XRN1YGL173C RPL19BP0CX83 189 aaPredicted RBP3.56□□□□□ -1.84
XRN1YGL173C YPT7P32939 208 aa3.56□□□□□ -1.84
XRN1YGL173C DUR3P33413 735 aa3.56□□□□□ -1.84
XRN1YGL173C YKL107WP34251 309 aa3.56□□□□□ -1.84
XRN1YGL173C TYS1P36421 394 aaKnown RBP3.56□□□□□ -1.84
XRN1YGL173C SPO74P45819 413 aa3.56□□□□□ -1.84
XRN1YGL173C YJR039WP47107 1121 aa3.56□□□□□ -1.84
XRN1YGL173C YLR419WQ06698 1435 aaKnown RBP3.56□□□□□ -1.84
XRN1YGL173C CLC1P17891 233 aa3.56□□□□□ -1.84
XRN1YGL173C CNS1P33313 385 aa3.56□□□□□ -1.84
XRN1YGL173C SIP5P40210 489 aaKnown RBP3.56□□□□□ -1.84
XRN1YGL173C YGR016WP53209 190 aa3.56□□□□□ -1.84
XRN1YGL173C SRP1Q02821 542 aaKnown RBP3.56□□□□□ -1.84
XRN1YGL173C PHM6Q05637 104 aa3.56□□□□□ -1.84
XRN1YGL173C MDM38Q08179 573 aa3.56□□□□□ -1.84
XRN1YGL173C URA1P28272 314 aaPredicted RBP3.55□□□□□ -1.84
XRN1YGL173C PEP7P32609 515 aa3.55□□□□□ -1.84
XRN1YGL173C SQT1P35184 431 aa3.55□□□□□ -1.84
XRN1YGL173C RGA1P39083 1007 aa3.55□□□□□ -1.84
XRN1YGL173C ARC1P46672 376 aaKnown RBP3.55□□□□□ -1.84
XRN1YGL173C DAS1P47005 663 aa3.55□□□□□ -1.84
XRN1YGL173C CTF18P49956 741 aa3.55□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms