RNA–Protein interactions for RNA: YFR002W

NIC96, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeastyeast

Gene NIC96, Length 2,520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIC96YFR002W MSE1P48525 536 aa3.55□□□□□ -1.84
NIC96YFR002W SLI1P53304 468 aa3.55□□□□□ -1.84
NIC96YFR002W SLU7Q02775 382 aaKnown RBP3.55□□□□□ -1.84
NIC96YFR002W MSS4P38994 779 aa3.55□□□□□ -1.84
NIC96YFR002W TIM54P47045 478 aa3.55□□□□□ -1.84
NIC96YFR002W BUL1P48524 976 aa3.55□□□□□ -1.84
NIC96YFR002W KIN4Q01919 800 aa3.55□□□□□ -1.84
NIC96YFR002W YJL049WP47048 450 aa3.54□□□□□ -1.84
NIC96YFR002W HDA1P53973 706 aa3.54□□□□□ -1.84
NIC96YFR002W TAF8Q03750 510 aa3.54□□□□□ -1.84
NIC96YFR002W OSH2Q12451 1283 aa3.54□□□□□ -1.84
NIC96YFR002W CIT1P00890 479 aa3.54□□□□□ -1.84
NIC96YFR002W PFK1P16861 987 aaKnown RBP3.54□□□□□ -1.84
NIC96YFR002W HSP60P19882 572 aaKnown RBP3.54□□□□□ -1.84
NIC96YFR002W AIM21P40563 679 aa3.54□□□□□ -1.84
NIC96YFR002W ENB1Q08299 606 aa3.54□□□□□ -1.84
NIC96YFR002W GUP2Q08929 609 aa3.54□□□□□ -1.84
NIC96YFR002W SED4P25365 1065 aa3.53□□□□□ -1.84
NIC96YFR002W YGR125WP53273 1036 aa3.53□□□□□ -1.84
NIC96YFR002W ENV7Q12003 364 aa3.53□□□□□ -1.84
NIC96YFR002W PEP1P32319 1579 aa3.53□□□□□ -1.84
NIC96YFR002W RFA1P22336 621 aaKnown RBP3.53□□□□□ -1.84
NIC96YFR002W URA1P28272 314 aaPredicted RBP3.53□□□□□ -1.84
NIC96YFR002W CHS7P38843 316 aa3.53□□□□□ -1.84
NIC96YFR002W HUL5P53119 910 aa3.53□□□□□ -1.84
NIC96YFR002W YKR011CQ02209 353 aa3.53□□□□□ -1.84
NIC96YFR002W FLC1Q08967 793 aa3.53□□□□□ -1.84
NIC96YFR002W BUD4P47136 1447 aa3.53□□□□□ -1.84
NIC96YFR002W SDP1P40479 209 aa3.52□□□□□ -1.85
NIC96YFR002W YIL108WP40483 696 aaKnown RBP3.52□□□□□ -1.85
NIC96YFR002W BDF2Q07442 638 aa3.52□□□□□ -1.85
NIC96YFR002W PNS1Q12412 539 aa3.52□□□□□ -1.85
NIC96YFR002W MDS3P53094 1487 aa3.52□□□□□ -1.85
NIC96YFR002W HRR25P29295 494 aaKnown RBP3.52□□□□□ -1.85
NIC96YFR002W SEC21P32074 935 aaKnown RBP3.52□□□□□ -1.85
NIC96YFR002W TYE7P33122 291 aaPredicted RBP3.52□□□□□ -1.85
NIC96YFR002W BET3P36149 193 aa3.52□□□□□ -1.85
NIC96YFR002W CTF8P38877 133 aa3.52□□□□□ -1.85
NIC96YFR002W CEP3P40969 608 aa3.52□□□□□ -1.85
NIC96YFR002W UBP6P43593 499 aaKnown RBP3.52□□□□□ -1.85
NIC96YFR002W MYO2P19524 1574 aaKnown RBP3.52□□□□□ -1.85
NIC96YFR002W VPS30Q02948 557 aa3.51□□□□□ -1.85
NIC96YFR002W MPH2P0CD99 609 aa3.51□□□□□ -1.85
NIC96YFR002W RTA1P53047 317 aa3.51□□□□□ -1.85
NIC96YFR002W TUB3P09734 445 aaKnown RBP3.5□□□□□ -1.85
NIC96YFR002W CAD1P24813 409 aaKnown RBP3.5□□□□□ -1.85
NIC96YFR002W RSP5P39940 809 aaKnown RBP3.5□□□□□ -1.85
NIC96YFR002W GYP8P43570 497 aa3.5□□□□□ -1.85
NIC96YFR002W ERG5P54781 538 aa3.5□□□□□ -1.85
NIC96YFR002W YDL124WQ07551 312 aaKnown RBP3.5□□□□□ -1.85
NIC96YFR002W SSK2P53599 1579 aa3.5□□□□□ -1.85
NIC96YFR002W CAN1P04817 590 aa3.5□□□□□ -1.85
NIC96YFR002W HUL4P40985 892 aa3.5□□□□□ -1.85
NIC96YFR002W NSE3Q05541 303 aa3.5□□□□□ -1.85
NIC96YFR002W AIM39Q08223 395 aa3.5□□□□□ -1.85
NIC96YFR002W DNF1P32660 1571 aa3.49□□□□□ -1.85
NIC96YFR002W EFT1P32324 842 aaKnown RBP3.49□□□□□ -1.85
NIC96YFR002W YGR283CP53336 341 aaPredicted RBP3.49□□□□□ -1.85
NIC96YFR002W URN1Q06525 465 aaKnown RBP3.49□□□□□ -1.85
NIC96YFR002W LTE1P07866 1435 aa3.49□□□□□ -1.85
NIC96YFR002W TRP4P07285 380 aaPredicted RBP3.49□□□□□ -1.85
NIC96YFR002W SCT1P32784 759 aa3.49□□□□□ -1.85
NIC96YFR002W EMC3P36039 253 aa3.49□□□□□ -1.85
NIC96YFR002W YLR040CQ07988 224 aa3.49□□□□□ -1.85
NIC96YFR002W PRP4P20053 465 aaKnown RBP3.48□□□□□ -1.85
NIC96YFR002W JSN1P47135 1091 aaKnown RBP RIP-Chip data3.48□□□□□ -1.85not detected
NIC96YFR002W NNF1P47149 201 aa3.48□□□□□ -1.85
NIC96YFR002W CTF4Q01454 927 aa3.48□□□□□ -1.85
NIC96YFR002W HAL9Q12180 1030 aa3.48□□□□□ -1.85
NIC96YFR002W TRM13Q12383 476 aa3.48□□□□□ -1.85
NIC96YFR002W RPS9AO13516 197 aaKnown RBP3.48□□□□□ -1.85
NIC96YFR002W TOM70P07213 617 aaKnown RBP3.48□□□□□ -1.85
NIC96YFR002W PEX19Q07418 342 aa3.48□□□□□ -1.85
NIC96YFR002W PPM2Q08282 695 aa3.48□□□□□ -1.85
NIC96YFR002W CDC53Q12018 815 aaKnown RBP3.48□□□□□ -1.85
NIC96YFR002W BPT1P14772 1559 aa3.48□□□□□ -1.85
NIC96YFR002W STI1P15705 589 aaKnown RBP RIP-Chip data3.47□□□□□ -1.85not detected
NIC96YFR002W DAL7P21826 554 aa3.47□□□□□ -1.85
NIC96YFR002W YCL002CP25565 263 aa3.47□□□□□ -1.85
NIC96YFR002W YHR078WP38799 552 aa3.47□□□□□ -1.85
NIC96YFR002W NIT3P49954 291 aa3.47□□□□□ -1.85
NIC96YFR002W TAD1P53065 400 aa3.47□□□□□ -1.85
NIC96YFR002W NOG2P53742 486 aaKnown RBP3.47□□□□□ -1.85
NIC96YFR002W DUS1P53759 423 aaKnown RBP3.47□□□□□ -1.85
NIC96YFR002W LRS4Q04087 347 aaKnown RBP3.47□□□□□ -1.85
NIC96YFR002W SPT6P23615 1451 aaKnown RBP3.47□□□□□ -1.85
NIC96YFR002W CYS3P31373 394 aaKnown RBP3.47□□□□□ -1.85
NIC96YFR002W CTF13P35203 478 aa3.47□□□□□ -1.85
NIC96YFR002W GGA2P38817 585 aaKnown RBP3.47□□□□□ -1.85
NIC96YFR002W HSL1P34244 1518 aa3.47□□□□□ -1.85
NIC96YFR002W ECM5Q03214 1411 aa3.47□□□□□ -1.85
NIC96YFR002W ERG4P25340 473 aa3.46□□□□□ -1.85
NIC96YFR002W ALG2P43636 503 aa3.46□□□□□ -1.85
NIC96YFR002W TY4A-JP47023 414 aa3.46□□□□□ -1.85
NIC96YFR002W YOL073CQ08232 322 aa3.46□□□□□ -1.85
NIC96YFR002W YOR022CQ12204 715 aa3.46□□□□□ -1.85
NIC96YFR002W YOL098CQ12496 1037 aa3.46□□□□□ -1.85
NIC96YFR002W GAL11P19659 1081 aa3.46□□□□□ -1.86
NIC96YFR002W OCA5P38738 679 aa3.46□□□□□ -1.86
NIC96YFR002W PUS2P53167 370 aa3.46□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 24 ms