RNA–Protein interactions for RNA: YER087C-B

SBH1, Transcript of Beta subunit of Sec61p ER translocation complex (Sec61p-Sss1p-Sbh1p), yeastyeast

Gene SBH1, Length 249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SBH1YER087C-B SMX3P54999 86 aaPredicted RBP1.45□□□□□ -2.18
SBH1YER087C-B SGO1Q08490 590 aa1.45□□□□□ -2.18
SBH1YER087C-B PAC2P39937 518 aa1.44□□□□□ -2.18
SBH1YER087C-B SAH1P39954 449 aaKnown RBP1.44□□□□□ -2.18
SBH1YER087C-B YBL113CQ7M4S9 792 aa1.44□□□□□ -2.18
SBH1YER087C-B APN1P22936 367 aa1.43□□□□□ -2.18
SBH1YER087C-B RPD3P32561 433 aa1.43□□□□□ -2.18
SBH1YER087C-B RER2P35196 286 aa1.43□□□□□ -2.18
SBH1YER087C-B ENT3P47160 408 aa1.43□□□□□ -2.18
SBH1YER087C-B GNP1P48813 663 aa1.43□□□□□ -2.18
SBH1YER087C-B FMP30Q02883 468 aa1.43□□□□□ -2.18
SBH1YER087C-B SLK19Q08581 821 aaKnown RBP1.43□□□□□ -2.18
SBH1YER087C-B GCR1P07261 785 aa1.42□□□□□ -2.18
SBH1YER087C-B MRPS18P42847 217 aa1.42□□□□□ -2.18
SBH1YER087C-B IRC8P47046 822 aa1.42□□□□□ -2.18
SBH1YER087C-B TEL2P53038 688 aa1.42□□□□□ -2.18
SBH1YER087C-B MOT2P34909 587 aaKnown RBP1.41□□□□□ -2.18
SBH1YER087C-B GCS1P35197 352 aa1.41□□□□□ -2.18
SBH1YER087C-B GGA2P38817 585 aaKnown RBP1.41□□□□□ -2.18
SBH1YER087C-B NDC80P40460 691 aa1.41□□□□□ -2.18
SBH1YER087C-B UBC9P50623 157 aaPredicted RBP1.41□□□□□ -2.18
SBH1YER087C-B EAF1Q06337 982 aa1.41□□□□□ -2.18
SBH1YER087C-B NOT3P06102 836 aaKnown RBP1.4□□□□□ -2.19
SBH1YER087C-B RPT1P33299 467 aaKnown RBP1.4□□□□□ -2.19
SBH1YER087C-B SDP1P40479 209 aa1.4□□□□□ -2.19
SBH1YER087C-B AMA1P50082 593 aa1.4□□□□□ -2.19
SBH1YER087C-B ASM4Q05166 528 aa1.4□□□□□ -2.19
SBH1YER087C-B SUB2Q07478 446 aaKnown RBP1.4□□□□□ -2.19
SBH1YER087C-B NDD1Q08887 554 aa1.4□□□□□ -2.19
SBH1YER087C-B YLL058WQ12198 575 aa1.4□□□□□ -2.19
SBH1YER087C-B PHR1P05066 565 aaKnown RBP RIP-Chip data1.39□□□□□ -2.19not detected
SBH1YER087C-B PRP4P20053 465 aaKnown RBP1.39□□□□□ -2.19
SBH1YER087C-B FMP52P40008 231 aa1.39□□□□□ -2.19
SBH1YER087C-B SCW10Q04951 389 aa1.39□□□□□ -2.19
SBH1YER087C-B MCD1Q12158 566 aa1.39□□□□□ -2.19
SBH1YER087C-B RPA135P22138 1203 aaKnown RBP1.38□□□□□ -2.19
SBH1YER087C-B MET4P32389 672 aa1.38□□□□□ -2.19
SBH1YER087C-B SPC29P33419 253 aa1.38□□□□□ -2.19
SBH1YER087C-B GLG1P36143 616 aa1.38□□□□□ -2.19
SBH1YER087C-B UBS1P38290 277 aa1.38□□□□□ -2.19
SBH1YER087C-B BCD1P38772 366 aa1.38□□□□□ -2.19
SBH1YER087C-B YIL108WP40483 696 aaKnown RBP1.38□□□□□ -2.19
SBH1YER087C-B VHR1P40522 640 aa1.38□□□□□ -2.19
SBH1YER087C-B YPL066WQ12194 479 aa1.38□□□□□ -2.19
SBH1YER087C-B YHL050CP38721 697 aa1.37□□□□□ -2.19
SBH1YER087C-B YHR219WP38900 624 aa1.37□□□□□ -2.19
SBH1YER087C-B TAX4P47030 604 aa1.37□□□□□ -2.19
SBH1YER087C-B CTR1P49573 406 aa1.37□□□□□ -2.19
SBH1YER087C-B HSV2P50079 448 aaPredicted RBP1.37□□□□□ -2.19
SBH1YER087C-B DMA2P53924 522 aa1.37□□□□□ -2.19
SBH1YER087C-B YIR042CP40586 236 aa1.36□□□□□ -2.19
SBH1YER087C-B CLN2P20438 545 aa1.35□□□□□ -2.19
SBH1YER087C-B BDH2P39713 417 aa1.35□□□□□ -2.19
SBH1YER087C-B ULP2P40537 1034 aaPredicted RBP1.35□□□□□ -2.19
SBH1YER087C-B MPH2P0CD99 609 aa1.34□□□□□ -2.19
SBH1YER087C-B INO1P11986 533 aa1.34□□□□□ -2.19
SBH1YER087C-B RAD27P26793 382 aa1.34□□□□□ -2.19
SBH1YER087C-B HIR1P32479 840 aa1.34□□□□□ -2.19
SBH1YER087C-B STE13P33894 931 aa1.34□□□□□ -2.19
SBH1YER087C-B SDS24P38314 527 aa1.34□□□□□ -2.19
SBH1YER087C-B PSA1P41940 361 aaKnown RBP1.34□□□□□ -2.19
SBH1YER087C-B MRK1P50873 501 aa1.34□□□□□ -2.19
SBH1YER087C-B PKH1Q03407 766 aa1.34□□□□□ -2.19
SBH1YER087C-B FBP1P09201 348 aa1.33□□□□□ -2.2
SBH1YER087C-B THI12P42883 340 aa1.33□□□□□ -2.2
SBH1YER087C-B THI5P43534 340 aa1.33□□□□□ -2.2
SBH1YER087C-B THI11P47183 340 aa1.33□□□□□ -2.2
SBH1YER087C-B THI13Q07748 340 aa1.33□□□□□ -2.2
SBH1YER087C-B HAT1Q12341 374 aa1.33□□□□□ -2.2
SBH1YER087C-B RAD2P07276 1031 aa1.32□□□□□ -2.2
SBH1YER087C-B STE12P13574 688 aa1.32□□□□□ -2.2
SBH1YER087C-B RPC82P32349 654 aa1.32□□□□□ -2.2
SBH1YER087C-B PXL1P36166 706 aa1.32□□□□□ -2.2
SBH1YER087C-B MUP3P38734 546 aa1.32□□□□□ -2.2
SBH1YER087C-B CTF8P38877 133 aa1.32□□□□□ -2.2
SBH1YER087C-B ENP2P48234 707 aaKnown RBP1.32□□□□□ -2.2
SBH1YER087C-B UBC11P52492 156 aa1.32□□□□□ -2.2
SBH1YER087C-B VPS30Q02948 557 aa1.32□□□□□ -2.2
SBH1YER087C-B NRG1Q03125 231 aa1.32□□□□□ -2.2
SBH1YER087C-B LAT1P12695 482 aaKnown RBP1.31□□□□□ -2.2
SBH1YER087C-B MBR1P23493 339 aa1.31□□□□□ -2.2
SBH1YER087C-B CCR4P31384 837 aaKnown RBP1.31□□□□□ -2.2
SBH1YER087C-B YKL107WP34251 309 aa1.31□□□□□ -2.2
SBH1YER087C-B YHR078WP38799 552 aa1.31□□□□□ -2.2
SBH1YER087C-B ARG2P40360 574 aa1.31□□□□□ -2.2
SBH1YER087C-B HOS4P40480 1083 aa1.31□□□□□ -2.2
SBH1YER087C-B CEP3P40969 608 aa1.31□□□□□ -2.2
SBH1YER087C-B LSC1P53598 329 aaKnown RBP1.31□□□□□ -2.2
SBH1YER087C-B MLH3Q12083 715 aa1.31□□□□□ -2.2
SBH1YER087C-B ADE5,7P07244 802 aaKnown RBP1.3□□□□□ -2.2
SBH1YER087C-B ECM32P32644 1121 aaKnown RBP1.3□□□□□ -2.2
SBH1YER087C-B RPS26AP39938 119 aaKnown RBP1.3□□□□□ -2.2
SBH1YER087C-B RPS26BP39939 119 aaKnown RBP1.3□□□□□ -2.2
SBH1YER087C-B YGR122WP53272 402 aa1.3□□□□□ -2.2
SBH1YER087C-B SCW4P53334 386 aaKnown RBP1.3□□□□□ -2.2
SBH1YER087C-B REV7P38927 245 aa1.29□□□□□ -2.2
SBH1YER087C-B GYP7P48365 746 aa1.29□□□□□ -2.2
SBH1YER087C-B YAP1802P53309 568 aa1.29□□□□□ -2.2
SBH1YER087C-B SRP1Q02821 542 aaKnown RBP1.29□□□□□ -2.2
SBH1YER087C-B YTH1Q06102 208 aaPredicted RBP1.29□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms